RNA–Protein interactions for RNA: ENST00000555176.5

HNRNPC-217, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-217ENST00000555176 TRIM47Q96LD4 638 aa4.41□□□□□ -1.7
HNRNPC-217ENST00000555176 SENP2Q9HC62 589 aa4.41□□□□□ -1.7
HNRNPC-217ENST00000555176 SALL2Q9Y467 1007 aaPredicted RBP4.41□□□□□ -1.7
HNRNPC-217ENST00000555176 ITSN2Q9NZM3 1697 aa4.41□□□□□ -1.7
HNRNPC-217ENST00000555176 ROBO1Q9Y6N7 1651 aa4.41□□□□□ -1.7
HNRNPC-217ENST00000555176 RICTORQ6R327 1708 aa4.41□□□□□ -1.7
HNRNPC-217ENST00000555176 PLEKHG3A1L390 1219 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 EIF5BO60841 1220 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 CD46P15529 392 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 KMT5BQ4FZB7 885 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 FAM43AQ8N2R8 423 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 HIRIP3Q9BW71 556 aaPredicted RBP4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 ESF1Q9H501 851 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 PPP1R1BQ9UD71 204 aaPredicted RBP4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 FAM198AQ9UFP1 575 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 ABCA8O94911 1581 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 KDM5CP41229 1560 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 NEURL4Q96JN8 1562 aa4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 EIF3AQ14152 1382 aaKnown RBP4.4□□□□□ -1.71
HNRNPC-217ENST00000555176 VIRMAQ69YN4 1812 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 DNMT1P26358 1616 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 ZNF142P52746 1687 aaPredicted RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 ATP10AO60312 1499 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 RALGAPBQ86X10 1494 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 RNF40O75150 1001 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 KDM4AO75164 1064 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 CLK2P49760 499 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 GSK3AP49840 483 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 FOXC1Q12948 553 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 NPAS3Q8IXF0 933 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 DNAJC5GQ8N7S2 189 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 IRF7Q92985 503 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 REPIN1Q9BWE0 567 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 TBC1D2Q9BYX2 928 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 PRM3Q9NNZ6 103 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 ATP13A2Q9NQ11 1180 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 LAS1LQ9Y4W2 734 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 PITPNM2Q9BZ72 1349 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 CEP170BQ9Y4F5 1589 aaPredicted RBP4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 USP47Q96K76 1375 aa4.39□□□□□ -1.71
HNRNPC-217ENST00000555176 E9PCH4 1651 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 CCDC144AA2RUR9 1427 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 PHLPP1O60346 1717 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 BECN1Q14457 450 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 RALBP1Q15311 655 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 TUSC1Q2TAM9 212 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 SWT1Q5T5J6 900 aaKnown RBP4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 MYSM1Q5VVJ2 828 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 TMC1Q8TDI8 760 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 NLRP7Q8WX94 980 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 KIFC2Q96AC6 838 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 BACH2Q9BYV9 841 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 NXF1Q9UBU9 619 aaKnown RBP4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 KIF7Q2M1P5 1343 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 MYBBP1AQ9BQG0 1328 aaKnown RBP4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 SPATA31E1Q6ZUB1 1445 aa4.38□□□□□ -1.71
HNRNPC-217ENST00000555176 MBD5Q9P267 1494 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 SPDYE5A6NIY4 337 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 S1PR4O95977 384 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 GCGRP47871 477 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 MLLT1Q03111 559 aaPredicted RBP4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 TMEM259Q4ZIN3 620 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 RIC3Q7Z5B4 369 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 CYP4X1Q8N118 509 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 PKNOX2Q96KN3 472 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 POLR3EQ9NVU0 708 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 RCAN3Q9UKA8 241 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 PCDHB3Q9Y5E6 796 aa4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 LRPPRCP42704 1394 aaKnown RBP4.37□□□□□ -1.71
HNRNPC-217ENST00000555176 ABCA9Q8IUA7 1624 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 MYO3AQ8NEV4 1616 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 EIF2AK4Q9P2K8 1649 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 CROCC2H7BZ55 1655 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 LRRIQ1Q96JM4 1722 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 STRCP1A6NGW2 1772 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 C3orf80F5H4A9 247 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 SPTLC1O15269 473 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 Q3C1V9 767 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 PRPF38BQ5VTL8 546 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 CENPQQ7L2Z9 268 aaPredicted RBP4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 NLRP13Q86W25 1043 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 WWC1Q8IX03 1113 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 TMEM151AQ8N4L1 468 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 JMYQ8N9B5 988 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 SPIRE2Q8WWL2 714 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 C8orf37Q96NL8 207 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 UPF2Q9HAU5 1272 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 DHX29Q7Z478 1369 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 DAPK1P53355 1430 aa4.36□□□□□ -1.71
HNRNPC-217ENST00000555176 LAMC1P11047 1609 aa4.35□□□□□ -1.71
HNRNPC-217ENST00000555176 COL16A1Q07092 1604 aaPredicted RBP4.35□□□□□ -1.71
HNRNPC-217ENST00000555176 CHD4Q14839 1912 aa4.35□□□□□ -1.71
HNRNPC-217ENST00000555176 DLL1O00548 723 aa4.35□□□□□ -1.71
HNRNPC-217ENST00000555176 RAD21O60216 631 aa4.35□□□□□ -1.71
HNRNPC-217ENST00000555176 CFHP08603 1231 aa4.35□□□□□ -1.71
HNRNPC-217ENST00000555176 NFKBIBQ15653 356 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms