RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 PLEKHF1Q96S99 279 aa15.84■□□□□ 0.13
ACTN1-214ENST00000555075 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
ACTN1-214ENST00000555075 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
ACTN1-214ENST00000555075 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
ACTN1-214ENST00000555075 MCM10Q7L590 875 aa15.83■□□□□ 0.12
ACTN1-214ENST00000555075 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.12
ACTN1-214ENST00000555075 RRP7AQ9Y3A4 280 aaKnown RBP15.83■□□□□ 0.12
ACTN1-214ENST00000555075 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-214ENST00000555075 CCER2I3L3R5 266 aa15.82■□□□□ 0.12
ACTN1-214ENST00000555075 STK32BQ9NY57 414 aa15.82■□□□□ 0.12
ACTN1-214ENST00000555075 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
ACTN1-214ENST00000555075 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
ACTN1-214ENST00000555075 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
ACTN1-214ENST00000555075 APAF1O14727 1248 aa15.8■□□□□ 0.12
ACTN1-214ENST00000555075 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
ACTN1-214ENST00000555075 DCTN1Q14203 1278 aa15.8■□□□□ 0.12
ACTN1-214ENST00000555075 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
ACTN1-214ENST00000555075 BTAF1O14981 1849 aa15.8■□□□□ 0.12
ACTN1-214ENST00000555075 ATP6V1AP38606 617 aa15.79■□□□□ 0.12
ACTN1-214ENST00000555075 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
ACTN1-214ENST00000555075 LOC102724428A0A0B4J2F2 783 aa15.78■□□□□ 0.12
ACTN1-214ENST00000555075 SIK1P57059 783 aa15.78■□□□□ 0.12
ACTN1-214ENST00000555075 CALD1Q05682 793 aaKnown RBP15.78■□□□□ 0.12
ACTN1-214ENST00000555075 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-214ENST00000555075 MIER1Q8N108 512 aa15.78■□□□□ 0.12
ACTN1-214ENST00000555075 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-214ENST00000555075 LAS1LQ9Y4W2 734 aaKnown RBP15.78■□□□□ 0.12
ACTN1-214ENST00000555075 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.12
ACTN1-214ENST00000555075 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
ACTN1-214ENST00000555075 MSH5O43196 834 aa15.76■□□□□ 0.11
ACTN1-214ENST00000555075 KCNQ4P56696 695 aa15.76■□□□□ 0.11
ACTN1-214ENST00000555075 PROM2Q8N271 834 aa15.76■□□□□ 0.11
ACTN1-214ENST00000555075 AK7Q96M32 723 aa15.76■□□□□ 0.11
ACTN1-214ENST00000555075 TFCP2L1Q9NZI6 479 aa15.76■□□□□ 0.11
ACTN1-214ENST00000555075 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-214ENST00000555075 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
ACTN1-214ENST00000555075 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
ACTN1-214ENST00000555075 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
ACTN1-214ENST00000555075 ITGB4P16144 1822 aa15.75■□□□□ 0.11
ACTN1-214ENST00000555075 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
ACTN1-214ENST00000555075 SENP3-EIF4A1A0A087X0R7 540 aa15.74■□□□□ 0.11
ACTN1-214ENST00000555075 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
ACTN1-214ENST00000555075 TSPYL4Q9UJ04 414 aa15.74■□□□□ 0.11
ACTN1-214ENST00000555075 CASZ1Q86V15 1759 aa15.74■□□□□ 0.11
ACTN1-214ENST00000555075 CEMIPQ8WUJ3 1361 aa15.74■□□□□ 0.11
ACTN1-214ENST00000555075 SPON1Q9HCB6 807 aa15.73■□□□□ 0.11
ACTN1-214ENST00000555075 MRC1P22897 1456 aa15.72■□□□□ 0.11
ACTN1-214ENST00000555075 SLC15A2Q16348 729 aa15.72■□□□□ 0.11
ACTN1-214ENST00000555075 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-214ENST00000555075 LRRC4BQ9NT99 713 aa15.72■□□□□ 0.11
ACTN1-214ENST00000555075 MIS18AQ9NYP9 233 aa15.72■□□□□ 0.11
ACTN1-214ENST00000555075 STARD3NLO95772 234 aa15.71■□□□□ 0.11
ACTN1-214ENST00000555075 PPP1R1BQ9UD71 204 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-214ENST00000555075 GNPATO15228 680 aa15.7■□□□□ 0.1
ACTN1-214ENST00000555075 NGEFQ8N5V2 710 aa15.7■□□□□ 0.1
ACTN1-214ENST00000555075 PDGFDQ9GZP0 370 aaPredicted RBP15.7■□□□□ 0.1
ACTN1-214ENST00000555075 PAPPAQ13219 1627 aa15.69■□□□□ 0.1
ACTN1-214ENST00000555075 PHF14O94880 888 aa15.69■□□□□ 0.1
ACTN1-214ENST00000555075 GNAI1P63096 354 aa15.69■□□□□ 0.1
ACTN1-214ENST00000555075 VSIG10Q8N0Z9 540 aa15.69■□□□□ 0.1
ACTN1-214ENST00000555075 FLAD1Q8NFF5 587 aa15.69■□□□□ 0.1
ACTN1-214ENST00000555075 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-214ENST00000555075 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
ACTN1-214ENST00000555075 ZBTB7AO95365 584 aa15.68■□□□□ 0.1
ACTN1-214ENST00000555075 SNRPA1P09661 255 aaKnown RBP15.68■□□□□ 0.1
ACTN1-214ENST00000555075 ITPK1Q13572 414 aa15.68■□□□□ 0.1
ACTN1-214ENST00000555075 DNAJC10Q8IXB1 793 aa15.68■□□□□ 0.1
ACTN1-214ENST00000555075 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
ACTN1-214ENST00000555075 BABAM1Q9NWV8 329 aa15.68■□□□□ 0.1
ACTN1-214ENST00000555075 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
ACTN1-214ENST00000555075 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
ACTN1-214ENST00000555075 HEG1Q9ULI3 1381 aa15.67■□□□□ 0.1
ACTN1-214ENST00000555075 KCNQ3O43525 872 aa15.67■□□□□ 0.1
ACTN1-214ENST00000555075 ARXQ96QS3 562 aa15.67■□□□□ 0.1
ACTN1-214ENST00000555075 ZNF330Q9Y3S2 320 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-214ENST00000555075 LY75O60449 1722 aa15.67■□□□□ 0.1
ACTN1-214ENST00000555075 DLG5Q8TDM6 1919 aa15.66■□□□□ 0.1
ACTN1-214ENST00000555075 ZNF827Q17R98 1081 aa15.66■□□□□ 0.1
ACTN1-214ENST00000555075 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
ACTN1-214ENST00000555075 AKT1S1Q96B36 256 aa15.66■□□□□ 0.1
ACTN1-214ENST00000555075 CRKLP46109 303 aaKnown RBP15.65■□□□□ 0.1
ACTN1-214ENST00000555075 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
ACTN1-214ENST00000555075 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
ACTN1-214ENST00000555075 WWC1Q8IX03 1113 aa15.65■□□□□ 0.1
ACTN1-214ENST00000555075 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
ACTN1-214ENST00000555075 CCDC87Q9NVE4 849 aa15.65■□□□□ 0.1
ACTN1-214ENST00000555075 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
ACTN1-214ENST00000555075 VIRMAQ69YN4 1812 aaKnown RBP15.65■□□□□ 0.1
ACTN1-214ENST00000555075 CANXP27824 592 aaKnown RBP15.64■□□□□ 0.09
ACTN1-214ENST00000555075 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
ACTN1-214ENST00000555075 SLC4A9Q96Q91 983 aa15.64■□□□□ 0.09
ACTN1-214ENST00000555075 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-214ENST00000555075 CNTNAP4Q9C0A0 1308 aa15.64■□□□□ 0.09
ACTN1-214ENST00000555075 C5P01031 1676 aa15.63■□□□□ 0.09
ACTN1-214ENST00000555075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
ACTN1-214ENST00000555075 SSFA2P28290 1259 aa15.63■□□□□ 0.09
ACTN1-214ENST00000555075 RFC4P35249 363 aa15.63■□□□□ 0.09
ACTN1-214ENST00000555075 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
ACTN1-214ENST00000555075 CHL1O00533 1208 aa15.62■□□□□ 0.09
ACTN1-214ENST00000555075 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms