RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 MCM10Q7L590 875 aa15.95■□□□□ 0.14
RIPK3-204ENST00000554756 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
RIPK3-204ENST00000554756 RRP7AQ9Y3A4 280 aaKnown RBP15.95■□□□□ 0.14
RIPK3-204ENST00000554756 EP400Q96L91 3159 aa15.94■□□□□ 0.14
RIPK3-204ENST00000554756 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
RIPK3-204ENST00000554756 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
RIPK3-204ENST00000554756 PALLDQ8WX93 1383 aa15.93■□□□□ 0.14
RIPK3-204ENST00000554756 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
RIPK3-204ENST00000554756 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
RIPK3-204ENST00000554756 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
RIPK3-204ENST00000554756 RIPK4P57078 832 aa15.92■□□□□ 0.14
RIPK3-204ENST00000554756 TEFQ10587 303 aa15.92■□□□□ 0.14
RIPK3-204ENST00000554756 SMARCC1Q92922 1105 aaPredicted RBP15.92■□□□□ 0.14
RIPK3-204ENST00000554756 LRRC4BQ9NT99 713 aa15.92■□□□□ 0.14
RIPK3-204ENST00000554756 ITGB4P16144 1822 aa15.91■□□□□ 0.14
RIPK3-204ENST00000554756 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
RIPK3-204ENST00000554756 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
RIPK3-204ENST00000554756 THUMPD2Q9BTF0 503 aaKnown RBP15.91■□□□□ 0.14
RIPK3-204ENST00000554756 CCNL1Q9UK58 526 aaPredicted RBP15.91■□□□□ 0.14
RIPK3-204ENST00000554756 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
RIPK3-204ENST00000554756 APAF1O14727 1248 aa15.9■□□□□ 0.14
RIPK3-204ENST00000554756 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
RIPK3-204ENST00000554756 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
RIPK3-204ENST00000554756 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
RIPK3-204ENST00000554756 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
RIPK3-204ENST00000554756 SLC27A3Q5K4L6 730 aa15.89■□□□□ 0.13
RIPK3-204ENST00000554756 MRC1P22897 1456 aa15.88■□□□□ 0.13
RIPK3-204ENST00000554756 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
RIPK3-204ENST00000554756 SIK1P57059 783 aa15.88■□□□□ 0.13
RIPK3-204ENST00000554756 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
RIPK3-204ENST00000554756 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
RIPK3-204ENST00000554756 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
RIPK3-204ENST00000554756 RREB1Q92766 1687 aa15.87■□□□□ 0.13
RIPK3-204ENST00000554756 RGPD3A6NKT7 1758 aaPredicted RBP15.87■□□□□ 0.13
RIPK3-204ENST00000554756 RGPD4Q7Z3J3 1758 aa15.87■□□□□ 0.13
RIPK3-204ENST00000554756 PSDA5PKW4 1024 aaPredicted RBP15.87■□□□□ 0.13
RIPK3-204ENST00000554756 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
RIPK3-204ENST00000554756 BTBD11A6QL63 1104 aa15.86■□□□□ 0.13
RIPK3-204ENST00000554756 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
RIPK3-204ENST00000554756 LMOD3Q0VAK6 560 aa15.86■□□□□ 0.13
RIPK3-204ENST00000554756 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
RIPK3-204ENST00000554756 NUP188Q5SRE5 1749 aa15.86■□□□□ 0.13
RIPK3-204ENST00000554756 KCNQ3O43525 872 aa15.85■□□□□ 0.13
RIPK3-204ENST00000554756 ITPK1Q13572 414 aa15.85■□□□□ 0.13
RIPK3-204ENST00000554756 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
RIPK3-204ENST00000554756 MIS18AQ9NYP9 233 aa15.85■□□□□ 0.13
RIPK3-204ENST00000554756 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
RIPK3-204ENST00000554756 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
RIPK3-204ENST00000554756 TTC5Q8N0Z6 440 aa15.85■□□□□ 0.13
RIPK3-204ENST00000554756 ZNF827Q17R98 1081 aa15.84■□□□□ 0.13
RIPK3-204ENST00000554756 LY75O60449 1722 aa15.84■□□□□ 0.13
RIPK3-204ENST00000554756 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
RIPK3-204ENST00000554756 LINC00116Q8NCU8 138 aa15.83■□□□□ 0.12
RIPK3-204ENST00000554756 SLC15A2Q16348 729 aa15.82■□□□□ 0.12
RIPK3-204ENST00000554756 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
RIPK3-204ENST00000554756 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
RIPK3-204ENST00000554756 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
RIPK3-204ENST00000554756 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
RIPK3-204ENST00000554756 LAS1LQ9Y4W2 734 aaKnown RBP15.81■□□□□ 0.12
RIPK3-204ENST00000554756 VIRMAQ69YN4 1812 aaKnown RBP15.81■□□□□ 0.12
RIPK3-204ENST00000554756 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
RIPK3-204ENST00000554756 KCPQ6ZWJ8 1503 aa15.8■□□□□ 0.12
RIPK3-204ENST00000554756 PAPPAQ13219 1627 aa15.8■□□□□ 0.12
RIPK3-204ENST00000554756 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
RIPK3-204ENST00000554756 SMIM5Q71RC9 77 aa15.79■□□□□ 0.12
RIPK3-204ENST00000554756 AK7Q96M32 723 aa15.79■□□□□ 0.12
RIPK3-204ENST00000554756 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
RIPK3-204ENST00000554756 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
RIPK3-204ENST00000554756 SIPA1L3O60292 1781 aaPredicted RBP15.78■□□□□ 0.12
RIPK3-204ENST00000554756 PDGFDQ9GZP0 370 aaPredicted RBP15.78■□□□□ 0.12
RIPK3-204ENST00000554756 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
RIPK3-204ENST00000554756 HMGB2P26583 209 aaKnown RBP15.77■□□□□ 0.11
RIPK3-204ENST00000554756 RNF123Q5XPI4 1314 aa15.77■□□□□ 0.11
RIPK3-204ENST00000554756 C5P01031 1676 aa15.76■□□□□ 0.11
RIPK3-204ENST00000554756 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
RIPK3-204ENST00000554756 GNPATO15228 680 aa15.76■□□□□ 0.11
RIPK3-204ENST00000554756 PHF14O94880 888 aa15.76■□□□□ 0.11
RIPK3-204ENST00000554756 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
RIPK3-204ENST00000554756 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
RIPK3-204ENST00000554756 MSH5O43196 834 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 CYP19A1P11511 503 aaPredicted RBP15.75■□□□□ 0.11
RIPK3-204ENST00000554756 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
RIPK3-204ENST00000554756 PNPLA7Q6ZV29 1317 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 AMIGO3Q86WK7 504 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 WWC1Q8IX03 1113 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 C4BP0C0L5 1744 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 CNTNAP4Q9C0A0 1308 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 CHL1O00533 1208 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
RIPK3-204ENST00000554756 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
RIPK3-204ENST00000554756 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
RIPK3-204ENST00000554756 RC3H1Q5TC82 1133 aaKnown RBP15.74■□□□□ 0.11
RIPK3-204ENST00000554756 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
RIPK3-204ENST00000554756 COL23A1Q86Y22 540 aaPredicted RBP15.74■□□□□ 0.11
RIPK3-204ENST00000554756 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
RIPK3-204ENST00000554756 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
RIPK3-204ENST00000554756 TJP1Q07157 1748 aa15.74■□□□□ 0.11
RIPK3-204ENST00000554756 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
RIPK3-204ENST00000554756 TEX13AQ9BXU3 409 aaPredicted RBP15.73■□□□□ 0.11
RIPK3-204ENST00000554756 CCDC87Q9NVE4 849 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms