RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SPDYE5A6NIY4 337 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 CFAP99D6REC4 459 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 HRCP23327 699 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 SH3BP2P78314 561 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 IDI1Q13907 227 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 BCANQ96GW7 911 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 ABCC3O15438 1527 aa7.63□□□□□ -1.19
ATXN3-229ENST00000554672 SLIT1O75093 1534 aa7.63□□□□□ -1.19
ATXN3-229ENST00000554672 ARHGAP31Q2M1Z3 1444 aa7.63□□□□□ -1.19
ATXN3-229ENST00000554672 KCNH2Q12809 1159 aa7.63□□□□□ -1.19
ATXN3-229ENST00000554672 RIC3Q7Z5B4 369 aa7.63□□□□□ -1.19
ATXN3-229ENST00000554672 TIAM1Q13009 1591 aa7.63□□□□□ -1.19
ATXN3-229ENST00000554672 DIXDC1Q155Q3 683 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 CABLES1Q8TDN4 633 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 BAP1Q92560 729 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 UNC93B1Q9H1C4 597 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 LIMD1Q9UGP4 676 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 CAMSAP2Q08AD1 1489 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
ATXN3-229ENST00000554672 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
ATXN3-229ENST00000554672 MYSM1Q5VVJ2 828 aa7.61□□□□□ -1.19
ATXN3-229ENST00000554672 EHBP1L1Q8N3D4 1523 aa7.61□□□□□ -1.19
ATXN3-229ENST00000554672 ALDH1A1P00352 501 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-229ENST00000554672 EHBP1Q8NDI1 1231 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 C19orf44Q9H6X5 657 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 RRP7BPQ9NSQ0 103 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 FGD6Q6ZV73 1430 aa7.6□□□□□ -1.19
ATXN3-229ENST00000554672 KANK1Q14678 1352 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 PRDM15P57071 1507 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-229ENST00000554672 ATF3P18847 181 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 QPCTQ16769 361 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 PRPF38BQ5VTL8 546 aaKnown RBP7.59□□□□□ -1.19
ATXN3-229ENST00000554672 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 ZBTB3Q9H5J0 574 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 ATP13A2Q9NQ11 1180 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 NCOA3Q9Y6Q9 1424 aa7.59□□□□□ -1.19
ATXN3-229ENST00000554672 ARHGEF5Q12774 1597 aa7.59□□□□□ -1.2
ATXN3-229ENST00000554672 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 C11orf95C9JLR9 678 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 PER1O15534 1290 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-229ENST00000554672 MAP10Q9P2G4 905 aa7.58□□□□□ -1.2
ATXN3-229ENST00000554672 NKTRP30414 1462 aaKnown RBP7.57□□□□□ -1.2
ATXN3-229ENST00000554672 LILRB3O75022 631 aa7.57□□□□□ -1.2
ATXN3-229ENST00000554672 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-229ENST00000554672 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
ATXN3-229ENST00000554672 ZNF511Q8NB15 262 aa7.57□□□□□ -1.2
ATXN3-229ENST00000554672 QTRT2Q9H974 415 aaKnown RBP7.57□□□□□ -1.2
ATXN3-229ENST00000554672 MYOM3Q5VTT5 1437 aa7.57□□□□□ -1.2
ATXN3-229ENST00000554672 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
ATXN3-229ENST00000554672 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
ATXN3-229ENST00000554672 UBR1Q8IWV7 1749 aa7.56□□□□□ -1.2
ATXN3-229ENST00000554672 SNRPBP14678 240 aaKnown RBP7.56□□□□□ -1.2
ATXN3-229ENST00000554672 CTHP32929 405 aa7.56□□□□□ -1.2
ATXN3-229ENST00000554672 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
ATXN3-229ENST00000554672 RTL5Q5HYW3 569 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-229ENST00000554672 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATXN3-229ENST00000554672 TET3O43151 1660 aa7.56□□□□□ -1.2
ATXN3-229ENST00000554672 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
ATXN3-229ENST00000554672 DUOX2Q9NRD8 1548 aa7.56□□□□□ -1.2
ATXN3-229ENST00000554672 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-229ENST00000554672 AFF2P51816 1311 aa7.55□□□□□ -1.2
ATXN3-229ENST00000554672 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-229ENST00000554672 NUTM2DQ5VT03 806 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-229ENST00000554672 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
ATXN3-229ENST00000554672 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
ATXN3-229ENST00000554672 TLL2Q9Y6L7 1015 aa7.55□□□□□ -1.2
ATXN3-229ENST00000554672 EFCAB6Q5THR3 1501 aa7.55□□□□□ -1.2
ATXN3-229ENST00000554672 LRP6O75581 1613 aa7.55□□□□□ -1.2
ATXN3-229ENST00000554672 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
ATXN3-229ENST00000554672 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
ATXN3-229ENST00000554672 ERBINQ96RT1 1412 aa7.54□□□□□ -1.2
ATXN3-229ENST00000554672 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
ATXN3-229ENST00000554672 FOXJ1Q92949 421 aa7.54□□□□□ -1.2
ATXN3-229ENST00000554672 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
ATXN3-229ENST00000554672 NOS1P29475 1434 aa7.53□□□□□ -1.2
ATXN3-229ENST00000554672 MROH1Q8NDA8 1641 aa7.53□□□□□ -1.2
ATXN3-229ENST00000554672 EIF2AK4Q9P2K8 1649 aaKnown RBP7.53□□□□□ -1.2
ATXN3-229ENST00000554672 VARSP26640 1264 aaKnown RBP7.53□□□□□ -1.2
ATXN3-229ENST00000554672 TRIM47Q96LD4 638 aa7.53□□□□□ -1.2
ATXN3-229ENST00000554672 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
ATXN3-229ENST00000554672 AMOTL2Q9Y2J4 779 aa7.53□□□□□ -1.2
ATXN3-229ENST00000554672 ABCC5O15440 1437 aa7.52□□□□□ -1.2
ATXN3-229ENST00000554672 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.2
ATXN3-229ENST00000554672 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 MPNDQ8N594 471 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms