RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
CHD8-207ENST00000554384 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
CHD8-207ENST00000554384 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
CHD8-207ENST00000554384 WIPF1O43516 503 aa9.31□□□□□ -0.92
CHD8-207ENST00000554384 HINFPQ9BQA5 517 aa9.31□□□□□ -0.92
CHD8-207ENST00000554384 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
CHD8-207ENST00000554384 RAB6BQ9NRW1 208 aa9.31□□□□□ -0.92
CHD8-207ENST00000554384 ZNF358Q9NW07 568 aa9.31□□□□□ -0.92
CHD8-207ENST00000554384 SERTAD1Q9UHV2 236 aa9.31□□□□□ -0.92
CHD8-207ENST00000554384 SSFA2P28290 1259 aa9.3□□□□□ -0.92
CHD8-207ENST00000554384 CLP1Q92989 425 aaKnown RBP9.3□□□□□ -0.92
CHD8-207ENST00000554384 ITPKCQ96DU7 683 aa9.3□□□□□ -0.92
CHD8-207ENST00000554384 RBM19Q9Y4C8 960 aaKnown RBP9.3□□□□□ -0.92
CHD8-207ENST00000554384 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 GDF10P55107 478 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
CHD8-207ENST00000554384 AGBL1Q96MI9 1066 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 KLF16Q9BXK1 252 aaPredicted RBP9.29□□□□□ -0.92
CHD8-207ENST00000554384 ETNK1Q9HBU6 452 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 EMILIN1Q9Y6C2 1016 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 IVNS1ABPQ9Y6Y0 642 aa9.29□□□□□ -0.92
CHD8-207ENST00000554384 BMP1P13497 986 aa9.28□□□□□ -0.92
CHD8-207ENST00000554384 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
CHD8-207ENST00000554384 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CHD8-207ENST00000554384 ZIC2O95409 532 aaPredicted RBP9.27□□□□□ -0.93
CHD8-207ENST00000554384 WDR4P57081 412 aaKnown RBP9.27□□□□□ -0.93
CHD8-207ENST00000554384 OCLNQ16625 522 aa9.27□□□□□ -0.93
CHD8-207ENST00000554384 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.93
CHD8-207ENST00000554384 KIFC2Q96AC6 838 aa9.27□□□□□ -0.93
CHD8-207ENST00000554384 ARHGEF10LQ9HCE6 1279 aa9.27□□□□□ -0.93
CHD8-207ENST00000554384 KCNA1Q09470 495 aa9.26□□□□□ -0.93
CHD8-207ENST00000554384 SWI5Q1ZZU3 235 aa9.26□□□□□ -0.93
CHD8-207ENST00000554384 CAPN12Q6ZSI9 719 aa9.26□□□□□ -0.93
CHD8-207ENST00000554384 CAPN5O15484 640 aaPredicted RBP9.25□□□□□ -0.93
CHD8-207ENST00000554384 INHAP05111 366 aa9.25□□□□□ -0.93
CHD8-207ENST00000554384 TIMP2P16035 220 aa9.25□□□□□ -0.93
CHD8-207ENST00000554384 TBCELQ5QJ74 424 aa9.25□□□□□ -0.93
CHD8-207ENST00000554384 IL2RAP01589 272 aa9.24□□□□□ -0.93
CHD8-207ENST00000554384 CYP2U1Q7Z449 544 aa9.24□□□□□ -0.93
CHD8-207ENST00000554384 ADH1AP07327 375 aa9.23□□□□□ -0.93
CHD8-207ENST00000554384 RELBQ01201 579 aa9.23□□□□□ -0.93
CHD8-207ENST00000554384 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
CHD8-207ENST00000554384 MKNK1Q9BUB5 465 aa9.23□□□□□ -0.93
CHD8-207ENST00000554384 ZNF395Q9H8N7 513 aaPredicted RBP9.23□□□□□ -0.93
CHD8-207ENST00000554384 STK17AQ9UEE5 414 aa9.23□□□□□ -0.93
CHD8-207ENST00000554384 USP3Q9Y6I4 520 aa9.23□□□□□ -0.93
CHD8-207ENST00000554384 A0A1W2PRU2 124 aa9.22□□□□□ -0.93
CHD8-207ENST00000554384 GNRH1P01148 92 aa9.22□□□□□ -0.93
CHD8-207ENST00000554384 WEE1P30291 646 aa9.22□□□□□ -0.93
CHD8-207ENST00000554384 INSM1Q01101 510 aaPredicted RBP9.22□□□□□ -0.93
CHD8-207ENST00000554384 TSPAN10Q9H1Z9 355 aaPredicted RBP9.22□□□□□ -0.93
CHD8-207ENST00000554384 CXXC1Q9P0U4 656 aaPredicted RBP9.22□□□□□ -0.93
CHD8-207ENST00000554384 C21orf2O43822 256 aa9.21□□□□□ -0.94
CHD8-207ENST00000554384 SERPINB4P48594 390 aa9.21□□□□□ -0.94
CHD8-207ENST00000554384 EPHA4P54764 986 aa9.21□□□□□ -0.94
CHD8-207ENST00000554384 FKBP5Q13451 457 aaPredicted RBP9.21□□□□□ -0.94
CHD8-207ENST00000554384 Q6ZVU0 165 aa9.21□□□□□ -0.94
CHD8-207ENST00000554384 SCG3Q8WXD2 468 aaKnown RBP9.21□□□□□ -0.94
CHD8-207ENST00000554384 SEPT3Q9UH03 358 aa9.21□□□□□ -0.94
CHD8-207ENST00000554384 M0R2N6 131 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 MEN1O00255 615 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 PTGIRP43119 386 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 B4GALNT3Q6L9W6 998 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 XAGE2Q96GT9 111 aa9.2□□□□□ -0.94
CHD8-207ENST00000554384 NXF1Q9UBU9 619 aaKnown RBP9.2□□□□□ -0.94
CHD8-207ENST00000554384 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
CHD8-207ENST00000554384 BACH1O14867 736 aa9.19□□□□□ -0.94
CHD8-207ENST00000554384 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
CHD8-207ENST00000554384 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
CHD8-207ENST00000554384 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
CHD8-207ENST00000554384 HRH3Q9Y5N1 445 aa9.19□□□□□ -0.94
CHD8-207ENST00000554384 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
CHD8-207ENST00000554384 VEGFBP49765 207 aa9.18□□□□□ -0.94
CHD8-207ENST00000554384 SMTNP53814 917 aa9.18□□□□□ -0.94
CHD8-207ENST00000554384 ESCO1Q5FWF5 840 aa9.18□□□□□ -0.94
CHD8-207ENST00000554384 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
CHD8-207ENST00000554384 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
CHD8-207ENST00000554384 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
CHD8-207ENST00000554384 GNEQ9Y223 722 aaKnown RBP9.18□□□□□ -0.94
CHD8-207ENST00000554384 A6NJY4 79 aa9.17□□□□□ -0.94
CHD8-207ENST00000554384 FOXK2Q01167 660 aa9.17□□□□□ -0.94
CHD8-207ENST00000554384 CENPCQ03188 943 aa9.17□□□□□ -0.94
CHD8-207ENST00000554384 NAA30Q147X3 362 aaPredicted RBP9.17□□□□□ -0.94
CHD8-207ENST00000554384 ESYT1Q9BSJ8 1104 aa9.17□□□□□ -0.94
CHD8-207ENST00000554384 SCHIP1Q9P0W5 487 aaPredicted RBP9.17□□□□□ -0.94
CHD8-207ENST00000554384 CLN3Q13286 438 aa9.16□□□□□ -0.94
CHD8-207ENST00000554384 TLR1Q15399 786 aa9.16□□□□□ -0.94
CHD8-207ENST00000554384 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
CHD8-207ENST00000554384 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
CHD8-207ENST00000554384 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
CHD8-207ENST00000554384 PATL2C9JE40 543 aaKnown RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 PPP1R12BO60237 982 aaPredicted RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 ABL1P00519 1130 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 GMPRP36959 345 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 MTMR3Q13615 1198 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms