RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TMF1P82094 1093 aa24.02■■□□□ 1.44
NEK9-204ENST00000554258 LOC102724428A0A0B4J2F2 783 aa24.01■■□□□ 1.43
NEK9-204ENST00000554258 AMPHP49418 695 aa24.01■■□□□ 1.43
NEK9-204ENST00000554258 CTCFP49711 727 aaPredicted RBP24.01■■□□□ 1.43
NEK9-204ENST00000554258 SIK1P57059 783 aa24.01■■□□□ 1.43
NEK9-204ENST00000554258 AIDAQ96BJ3 306 aa24.01■■□□□ 1.43
NEK9-204ENST00000554258 ZC3H4Q9UPT8 1303 aaKnown RBP24.01■■□□□ 1.43
NEK9-204ENST00000554258 CD163L1Q9NR16 1453 aa24■■□□□ 1.43
NEK9-204ENST00000554258 MLLT1Q03111 559 aaPredicted RBP24■■□□□ 1.43
NEK9-204ENST00000554258 USHBP1Q8N6Y0 703 aa24■■□□□ 1.43
NEK9-204ENST00000554258 ABHD8Q96I13 439 aa24■■□□□ 1.43
NEK9-204ENST00000554258 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
NEK9-204ENST00000554258 TATP17735 454 aaPredicted RBP23.99■■□□□ 1.43
NEK9-204ENST00000554258 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
NEK9-204ENST00000554258 PARP3Q9Y6F1 533 aa23.99■■□□□ 1.43
NEK9-204ENST00000554258 MAP3K19Q56UN5 1328 aa23.99■■□□□ 1.43
NEK9-204ENST00000554258 NBPF6Q5VWK0 638 aa23.98■■□□□ 1.43
NEK9-204ENST00000554258 PIGBQ92521 554 aa23.98■■□□□ 1.43
NEK9-204ENST00000554258 NBPF4Q96M43 638 aa23.98■■□□□ 1.43
NEK9-204ENST00000554258 CREBZFQ9NS37 354 aa23.98■■□□□ 1.43
NEK9-204ENST00000554258 GLTPD2A6NH11 291 aa23.97■■□□□ 1.43
NEK9-204ENST00000554258 TMC1Q8TDI8 760 aa23.96■■□□□ 1.43
NEK9-204ENST00000554258 ITPK1Q13572 414 aa23.95■■□□□ 1.42
NEK9-204ENST00000554258 TRAPPC3LQ5T215 181 aa23.95■■□□□ 1.42
NEK9-204ENST00000554258 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
NEK9-204ENST00000554258 CYP27B1O15528 508 aa23.93■■□□□ 1.42
NEK9-204ENST00000554258 LBX1P52954 281 aa23.93■■□□□ 1.42
NEK9-204ENST00000554258 RTCBQ9Y3I0 505 aaKnown RBP23.93■■□□□ 1.42
NEK9-204ENST00000554258 CCDC88AQ3V6T2 1871 aa23.93■■□□□ 1.42
NEK9-204ENST00000554258 RASSF7Q02833 373 aa23.92■■□□□ 1.42
NEK9-204ENST00000554258 TIAM2Q8IVF5 1701 aa23.92■■□□□ 1.42
NEK9-204ENST00000554258 SMG6Q86US8 1419 aaKnown RBP23.91■■□□□ 1.42
NEK9-204ENST00000554258 CNTNAP1P78357 1384 aa23.91■■□□□ 1.42
NEK9-204ENST00000554258 PDE4DIPQ5VU43 2346 aa23.9■■□□□ 1.42
NEK9-204ENST00000554258 GYS1P13807 737 aa23.9■■□□□ 1.42
NEK9-204ENST00000554258 KDM6AO15550 1401 aaPredicted RBP23.9■■□□□ 1.42
NEK9-204ENST00000554258 LMNB1P20700 586 aa23.89■■□□□ 1.41
NEK9-204ENST00000554258 FBLN1P23142 703 aa23.89■■□□□ 1.41
NEK9-204ENST00000554258 RFC4P35249 363 aa23.88■■□□□ 1.41
NEK9-204ENST00000554258 COG3Q96JB2 828 aa23.88■■□□□ 1.41
NEK9-204ENST00000554258 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
NEK9-204ENST00000554258 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
NEK9-204ENST00000554258 RTL1A6NKG5 1358 aa23.88■■□□□ 1.41
NEK9-204ENST00000554258 CCDC85CA6NKD9 419 aa23.87■■□□□ 1.41
NEK9-204ENST00000554258 CHRNA5P30532 468 aa23.87■■□□□ 1.41
NEK9-204ENST00000554258 RGS19P49795 217 aa23.87■■□□□ 1.41
NEK9-204ENST00000554258 ARHGEF1Q92888 912 aaKnown RBP23.87■■□□□ 1.41
NEK9-204ENST00000554258 ASAP1Q9ULH1 1129 aa23.87■■□□□ 1.41
NEK9-204ENST00000554258 A0A1W2PP64 1363 aa23.87■■□□□ 1.41
NEK9-204ENST00000554258 ADRA2BP18089 450 aa23.86■■□□□ 1.41
NEK9-204ENST00000554258 TMOD3Q9NYL9 352 aa23.86■■□□□ 1.41
NEK9-204ENST00000554258 VIRMAQ69YN4 1812 aaKnown RBP23.85■■□□□ 1.41
NEK9-204ENST00000554258 POTECB2RU33 542 aa23.84■■□□□ 1.41
NEK9-204ENST00000554258 CHADLQ6NUI6 762 aa23.84■■□□□ 1.41
NEK9-204ENST00000554258 WBP1LQ9NX94 342 aa23.84■■□□□ 1.41
NEK9-204ENST00000554258 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
NEK9-204ENST00000554258 VEGFBP49765 207 aa23.82■■□□□ 1.4
NEK9-204ENST00000554258 TNRC18O15417 2968 aaPredicted RBP23.82■■□□□ 1.4
NEK9-204ENST00000554258 RRS1Q15050 365 aaKnown RBP23.81■■□□□ 1.4
NEK9-204ENST00000554258 NKX1-1Q15270 411 aaPredicted RBP23.81■■□□□ 1.4
NEK9-204ENST00000554258 DPY19L2Q6NUT2 758 aa23.81■■□□□ 1.4
NEK9-204ENST00000554258 HSPA8P11142 646 aaKnown RBP23.8■■□□□ 1.4
NEK9-204ENST00000554258 COL5A3P25940 1745 aaPredicted RBP23.79■■□□□ 1.4
NEK9-204ENST00000554258 ATG3Q9NT62 314 aa23.78■■□□□ 1.4
NEK9-204ENST00000554258 RPS6KA4O75676 772 aa23.77■■□□□ 1.4
NEK9-204ENST00000554258 DDR1Q08345 913 aa23.77■■□□□ 1.4
NEK9-204ENST00000554258 RC3H1Q5TC82 1133 aaKnown RBP23.77■■□□□ 1.4
NEK9-204ENST00000554258 MYH14Q7Z406 1995 aaKnown RBP23.76■■□□□ 1.39
NEK9-204ENST00000554258 ZNF831Q5JPB2 1677 aa23.76■■□□□ 1.39
NEK9-204ENST00000554258 KDRP35968 1356 aa23.76■■□□□ 1.39
NEK9-204ENST00000554258 SPG7Q9UQ90 795 aa23.75■■□□□ 1.39
NEK9-204ENST00000554258 CNTNAP4Q9C0A0 1308 aa23.75■■□□□ 1.39
NEK9-204ENST00000554258 POTEIP0CG38 1075 aa23.74■■□□□ 1.39
NEK9-204ENST00000554258 POTEJP0CG39 1038 aa23.74■■□□□ 1.39
NEK9-204ENST00000554258 FKBP8Q14318 412 aa23.74■■□□□ 1.39
NEK9-204ENST00000554258 RBM42Q9BTD8 480 aaKnown RBP23.74■■□□□ 1.39
NEK9-204ENST00000554258 DICER1Q9UPY3 1922 aaKnown RBP23.74■■□□□ 1.39
NEK9-204ENST00000554258 HSP90AB2PQ58FF8 381 aa23.73■■□□□ 1.39
NEK9-204ENST00000554258 INSRP06213 1382 aa23.73■■□□□ 1.39
NEK9-204ENST00000554258 TMEM88BA6NKF7 163 aa23.72■■□□□ 1.39
NEK9-204ENST00000554258 CFAP44Q96MT7 982 aa23.72■■□□□ 1.39
NEK9-204ENST00000554258 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
NEK9-204ENST00000554258 PASKQ96RG2 1323 aa23.72■■□□□ 1.39
NEK9-204ENST00000554258 DLEC1Q9Y238 1755 aa23.72■■□□□ 1.39
NEK9-204ENST00000554258 SLC4A9Q96Q91 983 aa23.71■■□□□ 1.39
NEK9-204ENST00000554258 MAP2K1Q02750 393 aaPredicted RBP23.7■■□□□ 1.38
NEK9-204ENST00000554258 L3MBTL2Q969R5 705 aa23.7■■□□□ 1.38
NEK9-204ENST00000554258 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
NEK9-204ENST00000554258 NFKBIEO00221 500 aa23.69■■□□□ 1.38
NEK9-204ENST00000554258 POLRMTO00411 1230 aaKnown RBP23.68■■□□□ 1.38
NEK9-204ENST00000554258 TTLL6Q8N841 843 aa23.68■■□□□ 1.38
NEK9-204ENST00000554258 ERFEQ4G0M1 354 aa23.67■■□□□ 1.38
NEK9-204ENST00000554258 FLT4P35916 1363 aa23.66■■□□□ 1.38
NEK9-204ENST00000554258 AFDNP55196 1824 aaKnown RBP23.66■■□□□ 1.38
NEK9-204ENST00000554258 LDHDQ86WU2 507 aa23.66■■□□□ 1.38
NEK9-204ENST00000554258 PHKG2P15735 406 aa23.64■■□□□ 1.37
NEK9-204ENST00000554258 DEFB115Q30KQ5 88 aa23.64■■□□□ 1.37
NEK9-204ENST00000554258 IFNL2Q8IZJ0 200 aa23.64■■□□□ 1.37
NEK9-204ENST00000554258 CLSPNQ9HAW4 1339 aa23.63■■□□□ 1.37
NEK9-204ENST00000554258 RASSF10A6NK89 507 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms