RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
NUMB-208ENST00000554014 UBR2Q8IWV8 1755 aa12.27□□□□□ -0.45
NUMB-208ENST00000554014 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
NUMB-208ENST00000554014 NKX1-1Q15270 411 aaPredicted RBP12.27□□□□□ -0.45
NUMB-208ENST00000554014 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
NUMB-208ENST00000554014 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
NUMB-208ENST00000554014 NEFMP07197 916 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 GNAT3A8MTJ3 354 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 LGR6Q9HBX8 967 aa12.25□□□□□ -0.45
NUMB-208ENST00000554014 LY75O60449 1722 aa12.24□□□□□ -0.45
NUMB-208ENST00000554014 RIPK4P57078 832 aa12.24□□□□□ -0.45
NUMB-208ENST00000554014 MCM10Q7L590 875 aa12.24□□□□□ -0.45
NUMB-208ENST00000554014 IL17REQ8NFR9 667 aa12.24□□□□□ -0.45
NUMB-208ENST00000554014 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
NUMB-208ENST00000554014 RNMTO43148 476 aaKnown RBP12.23□□□□□ -0.45
NUMB-208ENST00000554014 ILDR2Q71H61 639 aa12.23□□□□□ -0.45
NUMB-208ENST00000554014 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
NUMB-208ENST00000554014 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
NUMB-208ENST00000554014 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
NUMB-208ENST00000554014 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
NUMB-208ENST00000554014 KCNQ2O43526 872 aa12.22□□□□□ -0.45
NUMB-208ENST00000554014 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
NUMB-208ENST00000554014 ACSBG1Q96GR2 724 aa12.22□□□□□ -0.45
NUMB-208ENST00000554014 C5P01031 1676 aa12.21□□□□□ -0.45
NUMB-208ENST00000554014 HTATSF1O43719 755 aaKnown RBP12.21□□□□□ -0.45
NUMB-208ENST00000554014 FAM196AQ6ZSG2 479 aa12.21□□□□□ -0.45
NUMB-208ENST00000554014 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
NUMB-208ENST00000554014 CICQ96RK0 1608 aaPredicted RBP12.21□□□□□ -0.46
NUMB-208ENST00000554014 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 KCPQ6ZWJ8 1503 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 TJP1Q07157 1748 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
NUMB-208ENST00000554014 CCDC27Q2M243 656 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 ZNF831Q5JPB2 1677 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 RREB1Q92766 1687 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 WWC1Q8IX03 1113 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
NUMB-208ENST00000554014 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
NUMB-208ENST00000554014 LAMB4A4D0S4 1761 aa12.19□□□□□ -0.46
NUMB-208ENST00000554014 TRIM37O94972 964 aa12.19□□□□□ -0.46
NUMB-208ENST00000554014 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
NUMB-208ENST00000554014 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
NUMB-208ENST00000554014 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
NUMB-208ENST00000554014 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
NUMB-208ENST00000554014 PIGBQ92521 554 aa12.18□□□□□ -0.46
NUMB-208ENST00000554014 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
NUMB-208ENST00000554014 CABP4P57796 275 aa12.17□□□□□ -0.46
NUMB-208ENST00000554014 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
NUMB-208ENST00000554014 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
NUMB-208ENST00000554014 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
NUMB-208ENST00000554014 TEFQ10587 303 aa12.16□□□□□ -0.46
NUMB-208ENST00000554014 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
NUMB-208ENST00000554014 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
NUMB-208ENST00000554014 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
NUMB-208ENST00000554014 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
NUMB-208ENST00000554014 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.46
NUMB-208ENST00000554014 TUBGCP6Q96RT7 1819 aa12.15□□□□□ -0.47
NUMB-208ENST00000554014 KCNQ3O43525 872 aa12.14□□□□□ -0.47
NUMB-208ENST00000554014 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
NUMB-208ENST00000554014 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
NUMB-208ENST00000554014 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
NUMB-208ENST00000554014 PALLDQ8WX93 1383 aa12.14□□□□□ -0.47
NUMB-208ENST00000554014 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
NUMB-208ENST00000554014 IL16Q14005 1332 aa12.13□□□□□ -0.47
NUMB-208ENST00000554014 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
NUMB-208ENST00000554014 CHL1O00533 1208 aa12.13□□□□□ -0.47
NUMB-208ENST00000554014 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
NUMB-208ENST00000554014 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
NUMB-208ENST00000554014 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
NUMB-208ENST00000554014 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
NUMB-208ENST00000554014 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
NUMB-208ENST00000554014 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
NUMB-208ENST00000554014 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
NUMB-208ENST00000554014 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
NUMB-208ENST00000554014 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
NUMB-208ENST00000554014 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
NUMB-208ENST00000554014 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
NUMB-208ENST00000554014 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
NUMB-208ENST00000554014 SLC4A9Q96Q91 983 aa12.11□□□□□ -0.47
NUMB-208ENST00000554014 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
NUMB-208ENST00000554014 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
NUMB-208ENST00000554014 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
NUMB-208ENST00000554014 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
NUMB-208ENST00000554014 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
NUMB-208ENST00000554014 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
NUMB-208ENST00000554014 APBA3O96018 575 aa12.1□□□□□ -0.47
NUMB-208ENST00000554014 GNAI1P63096 354 aa12.1□□□□□ -0.47
NUMB-208ENST00000554014 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
NUMB-208ENST00000554014 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
NUMB-208ENST00000554014 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
NUMB-208ENST00000554014 BABAM1Q9NWV8 329 aa12.1□□□□□ -0.47
NUMB-208ENST00000554014 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms