RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SLC52A2Q9HAB3 445 aa30.92■■■□□ 2.54
NEK9-203ENST00000553945 C5P01031 1676 aa30.92■■■□□ 2.54
NEK9-203ENST00000553945 AKT1S1Q96B36 256 aa30.91■■■□□ 2.54
NEK9-203ENST00000553945 PNNQ9H307 717 aaKnown RBP30.91■■■□□ 2.54
NEK9-203ENST00000553945 MRC1P22897 1456 aa30.9■■■□□ 2.54
NEK9-203ENST00000553945 TAF1LQ8IZX4 1826 aa30.9■■■□□ 2.54
NEK9-203ENST00000553945 RBM42Q9BTD8 480 aaKnown RBP30.89■■■□□ 2.54
NEK9-203ENST00000553945 IL17REQ8NFR9 667 aa30.88■■■□□ 2.53
NEK9-203ENST00000553945 PLEKHF1Q96S99 279 aa30.88■■■□□ 2.53
NEK9-203ENST00000553945 CASZ1Q86V15 1759 aa30.87■■■□□ 2.53
NEK9-203ENST00000553945 ANP32CO43423 234 aa30.87■■■□□ 2.53
NEK9-203ENST00000553945 WDR43Q15061 677 aaKnown RBP eCLIP30.87■■■□□ 2.53
NEK9-203ENST00000553945 PDGFDQ9GZP0 370 aaPredicted RBP30.87■■■□□ 2.53
NEK9-203ENST00000553945 HMGB2P26583 209 aaKnown RBP30.86■■■□□ 2.53
NEK9-203ENST00000553945 ATP6V1AP38606 617 aa30.86■■■□□ 2.53
NEK9-203ENST00000553945 TFCP2L1Q9NZI6 479 aa30.86■■■□□ 2.53
NEK9-203ENST00000553945 MAPK8IP3Q9UPT6 1336 aa30.86■■■□□ 2.53
NEK9-203ENST00000553945 TEFQ10587 303 aa30.85■■■□□ 2.53
NEK9-203ENST00000553945 RTF1Q92541 710 aaKnown RBP30.85■■■□□ 2.53
NEK9-203ENST00000553945 PTCD1O75127 700 aaKnown RBP30.84■■■□□ 2.53
NEK9-203ENST00000553945 TUBGCP6Q96RT7 1819 aa30.84■■■□□ 2.53
NEK9-203ENST00000553945 ITPK1Q13572 414 aa30.83■■■□□ 2.53
NEK9-203ENST00000553945 C4BP0C0L5 1744 aa30.83■■■□□ 2.53
NEK9-203ENST00000553945 QSER1Q2KHR3 1735 aa30.83■■■□□ 2.53
NEK9-203ENST00000553945 LINC00116Q8NCU8 138 aa30.82■■■□□ 2.52
NEK9-203ENST00000553945 LRP5O75197 1615 aa30.82■■■□□ 2.52
NEK9-203ENST00000553945 SLC39A6Q13433 755 aa30.81■■■□□ 2.52
NEK9-203ENST00000553945 SLC4A9Q96Q91 983 aa30.81■■■□□ 2.52
NEK9-203ENST00000553945 ZNF831Q5JPB2 1677 aa30.81■■■□□ 2.52
NEK9-203ENST00000553945 DLG5Q8TDM6 1919 aa30.81■■■□□ 2.52
NEK9-203ENST00000553945 CEMIPQ8WUJ3 1361 aa30.8■■■□□ 2.52
NEK9-203ENST00000553945 SIPA1L3O60292 1781 aaPredicted RBP30.8■■■□□ 2.52
NEK9-203ENST00000553945 NFE2L2Q16236 605 aa30.8■■■□□ 2.52
NEK9-203ENST00000553945 MCM10Q7L590 875 aa30.8■■■□□ 2.52
NEK9-203ENST00000553945 ZBTB7AO95365 584 aa30.79■■■□□ 2.52
NEK9-203ENST00000553945 AK7Q96M32 723 aa30.79■■■□□ 2.52
NEK9-203ENST00000553945 PNPLA7Q6ZV29 1317 aa30.78■■■□□ 2.52
NEK9-203ENST00000553945 HTATSF1O43719 755 aaKnown RBP30.78■■■□□ 2.52
NEK9-203ENST00000553945 DCTN1Q14203 1278 aa30.78■■■□□ 2.52
NEK9-203ENST00000553945 CCDC146Q8IYE0 955 aa30.78■■■□□ 2.52
NEK9-203ENST00000553945 ADAMTS8Q9UP79 889 aa30.78■■■□□ 2.52
NEK9-203ENST00000553945 SPON1Q9HCB6 807 aa30.77■■■□□ 2.52
NEK9-203ENST00000553945 CCDC184Q52MB2 194 aa30.75■■■□□ 2.51
NEK9-203ENST00000553945 MSH5O43196 834 aa30.74■■■□□ 2.51
NEK9-203ENST00000553945 TTC5Q8N0Z6 440 aa30.74■■■□□ 2.51
NEK9-203ENST00000553945 ATF5Q9Y2D1 282 aaPredicted RBP30.74■■■□□ 2.51
NEK9-203ENST00000553945 KCPQ6ZWJ8 1503 aa30.73■■■□□ 2.51
NEK9-203ENST00000553945 COL5A3P25940 1745 aaPredicted RBP30.73■■■□□ 2.51
NEK9-203ENST00000553945 TJP1Q07157 1748 aa30.73■■■□□ 2.51
NEK9-203ENST00000553945 RUNDC1Q96C34 613 aa30.72■■■□□ 2.51
NEK9-203ENST00000553945 UBR3Q6ZT12 1888 aa30.72■■■□□ 2.51
NEK9-203ENST00000553945 UBR2Q8IWV8 1755 aa30.71■■■□□ 2.51
NEK9-203ENST00000553945 BTBD11A6QL63 1104 aa30.71■■■□□ 2.51
NEK9-203ENST00000553945 COL23A1Q86Y22 540 aaPredicted RBP30.71■■■□□ 2.51
NEK9-203ENST00000553945 MTFR1LQ9H019 292 aa30.71■■■□□ 2.51
NEK9-203ENST00000553945 GNPATO15228 680 aa30.7■■■□□ 2.51
NEK9-203ENST00000553945 ZNF790Q6PG37 636 aa30.7■■■□□ 2.51
NEK9-203ENST00000553945 PHF14O94880 888 aa30.69■■■□□ 2.5
NEK9-203ENST00000553945 TMPOP42166 694 aaKnown RBP30.69■■■□□ 2.5
NEK9-203ENST00000553945 RIPK4P57078 832 aa30.69■■■□□ 2.5
NEK9-203ENST00000553945 SMIM5Q71RC9 77 aa30.69■■■□□ 2.5
NEK9-203ENST00000553945 AMIGO3Q86WK7 504 aa30.69■■■□□ 2.5
NEK9-203ENST00000553945 FLAD1Q8NFF5 587 aa30.69■■■□□ 2.5
NEK9-203ENST00000553945 CICQ96RK0 1608 aaPredicted RBP30.69■■■□□ 2.5
NEK9-203ENST00000553945 SLC16A10Q8TF71 515 aa30.68■■■□□ 2.5
NEK9-203ENST00000553945 MRS2Q9HD23 443 aa30.68■■■□□ 2.5
NEK9-203ENST00000553945 DNAJC10Q8IXB1 793 aa30.67■■■□□ 2.5
NEK9-203ENST00000553945 THUMPD2Q9BTF0 503 aaKnown RBP30.67■■■□□ 2.5
NEK9-203ENST00000553945 RRP7AQ9Y3A4 280 aaKnown RBP30.67■■■□□ 2.5
NEK9-203ENST00000553945 CNTNAP4Q9C0A0 1308 aa30.67■■■□□ 2.5
NEK9-203ENST00000553945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.66■■■□□ 2.5
NEK9-203ENST00000553945 RC3H1Q5TC82 1133 aaKnown RBP30.66■■■□□ 2.5
NEK9-203ENST00000553945 KCNQ3O43525 872 aa30.65■■■□□ 2.5
NEK9-203ENST00000553945 SSFA2P28290 1259 aa30.65■■■□□ 2.5
NEK9-203ENST00000553945 TAF7Q15545 349 aaPredicted RBP30.65■■■□□ 2.5
NEK9-203ENST00000553945 NEUROD2Q15784 382 aa30.65■■■□□ 2.5
NEK9-203ENST00000553945 ZNF496Q96IT1 587 aaPredicted RBP30.65■■■□□ 2.5
NEK9-203ENST00000553945 CRKLP46109 303 aaKnown RBP30.64■■■□□ 2.5
NEK9-203ENST00000553945 VSIG10Q8N0Z9 540 aa30.64■■■□□ 2.5
NEK9-203ENST00000553945 PPP1R1BQ9UD71 204 aaPredicted RBP30.64■■■□□ 2.5
NEK9-203ENST00000553945 RTCBQ9Y3I0 505 aaKnown RBP30.64■■■□□ 2.5
NEK9-203ENST00000553945 FMNL2Q96PY5 1086 aa30.63■■■□□ 2.49
NEK9-203ENST00000553945 MYH14Q7Z406 1995 aaKnown RBP30.63■■■□□ 2.49
NEK9-203ENST00000553945 PTGER2P43116 358 aa30.62■■■□□ 2.49
NEK9-203ENST00000553945 LMOD3Q0VAK6 560 aa30.62■■■□□ 2.49
NEK9-203ENST00000553945 HEG1Q9ULI3 1381 aa30.62■■■□□ 2.49
NEK9-203ENST00000553945 MIS18AQ9NYP9 233 aa30.61■■■□□ 2.49
NEK9-203ENST00000553945 RPS6KA4O75676 772 aa30.6■■■□□ 2.49
NEK9-203ENST00000553945 CYP19A1P11511 503 aaPredicted RBP30.6■■■□□ 2.49
NEK9-203ENST00000553945 PNISRQ8TF01 805 aaKnown RBP30.59■■■□□ 2.49
NEK9-203ENST00000553945 CCDC87Q9NVE4 849 aa30.59■■■□□ 2.49
NEK9-203ENST00000553945 TRAPPC3LQ5T215 181 aa30.58■■■□□ 2.49
NEK9-203ENST00000553945 INTS5Q6P9B9 1019 aaKnown RBP30.58■■■□□ 2.49
NEK9-203ENST00000553945 SGIP1Q9BQI5 828 aa30.58■■■□□ 2.49
NEK9-203ENST00000553945 MSL1Q68DK7 614 aa30.57■■■□□ 2.48
NEK9-203ENST00000553945 COL24A1Q17RW2 1714 aa30.56■■■□□ 2.48
NEK9-203ENST00000553945 APAF1O14727 1248 aa30.56■■■□□ 2.48
NEK9-203ENST00000553945 STARD3NLO95772 234 aa30.56■■■□□ 2.48
NEK9-203ENST00000553945 TEX13AQ9BXU3 409 aaPredicted RBP30.56■■■□□ 2.48
NEK9-203ENST00000553945 ADRA2BP18089 450 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms