RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
PCNX4-207ENST00000553898 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
PCNX4-207ENST00000553898 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
PCNX4-207ENST00000553898 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
PCNX4-207ENST00000553898 STK32BQ9NY57 414 aa12.96□□□□□ -0.33
PCNX4-207ENST00000553898 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
PCNX4-207ENST00000553898 RIPK4P57078 832 aa12.95□□□□□ -0.34
PCNX4-207ENST00000553898 MCM10Q7L590 875 aa12.95□□□□□ -0.34
PCNX4-207ENST00000553898 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
PCNX4-207ENST00000553898 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
PCNX4-207ENST00000553898 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
PCNX4-207ENST00000553898 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
PCNX4-207ENST00000553898 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
PCNX4-207ENST00000553898 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
PCNX4-207ENST00000553898 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
PCNX4-207ENST00000553898 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
PCNX4-207ENST00000553898 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
PCNX4-207ENST00000553898 SIK1P57059 783 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
PCNX4-207ENST00000553898 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 AK7Q96M32 723 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
PCNX4-207ENST00000553898 LRP5O75197 1615 aa12.91□□□□□ -0.34
PCNX4-207ENST00000553898 KCNQ4P56696 695 aa12.91□□□□□ -0.34
PCNX4-207ENST00000553898 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
PCNX4-207ENST00000553898 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
PCNX4-207ENST00000553898 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
PCNX4-207ENST00000553898 LY75O60449 1722 aa12.91□□□□□ -0.34
PCNX4-207ENST00000553898 APAF1O14727 1248 aa12.9□□□□□ -0.34
PCNX4-207ENST00000553898 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
PCNX4-207ENST00000553898 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
PCNX4-207ENST00000553898 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
PCNX4-207ENST00000553898 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
PCNX4-207ENST00000553898 MRC1P22897 1456 aa12.9□□□□□ -0.34
PCNX4-207ENST00000553898 CCER2I3L3R5 266 aa12.89□□□□□ -0.35
PCNX4-207ENST00000553898 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-207ENST00000553898 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
PCNX4-207ENST00000553898 PROM2Q8N271 834 aa12.89□□□□□ -0.35
PCNX4-207ENST00000553898 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
PCNX4-207ENST00000553898 C5P01031 1676 aa12.89□□□□□ -0.35
PCNX4-207ENST00000553898 SLC15A2Q16348 729 aa12.88□□□□□ -0.35
PCNX4-207ENST00000553898 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
PCNX4-207ENST00000553898 FMNL2Q96PY5 1086 aa12.88□□□□□ -0.35
PCNX4-207ENST00000553898 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
PCNX4-207ENST00000553898 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
PCNX4-207ENST00000553898 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
PCNX4-207ENST00000553898 CASZ1Q86V15 1759 aa12.88□□□□□ -0.35
PCNX4-207ENST00000553898 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
PCNX4-207ENST00000553898 GNPATO15228 680 aa12.86□□□□□ -0.35
PCNX4-207ENST00000553898 STARD3NLO95772 234 aa12.86□□□□□ -0.35
PCNX4-207ENST00000553898 MIER1Q8N108 512 aa12.86□□□□□ -0.35
PCNX4-207ENST00000553898 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-207ENST00000553898 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-207ENST00000553898 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
PCNX4-207ENST00000553898 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
PCNX4-207ENST00000553898 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
PCNX4-207ENST00000553898 PHF14O94880 888 aa12.85□□□□□ -0.35
PCNX4-207ENST00000553898 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
PCNX4-207ENST00000553898 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
PCNX4-207ENST00000553898 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
PCNX4-207ENST00000553898 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
PCNX4-207ENST00000553898 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
PCNX4-207ENST00000553898 LINC00116Q8NCU8 138 aa12.84□□□□□ -0.35
PCNX4-207ENST00000553898 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
PCNX4-207ENST00000553898 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
PCNX4-207ENST00000553898 C4BP0C0L5 1744 aa12.84□□□□□ -0.35
PCNX4-207ENST00000553898 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.35
PCNX4-207ENST00000553898 ITPK1Q13572 414 aa12.83□□□□□ -0.36
PCNX4-207ENST00000553898 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
PCNX4-207ENST00000553898 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-207ENST00000553898 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
PCNX4-207ENST00000553898 HEG1Q9ULI3 1381 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
PCNX4-207ENST00000553898 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
PCNX4-207ENST00000553898 GNAI1P63096 354 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 ARXQ96QS3 562 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
PCNX4-207ENST00000553898 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
PCNX4-207ENST00000553898 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
PCNX4-207ENST00000553898 BABAM1Q9NWV8 329 aa12.81□□□□□ -0.36
PCNX4-207ENST00000553898 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
PCNX4-207ENST00000553898 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
PCNX4-207ENST00000553898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
PCNX4-207ENST00000553898 KCNQ3O43525 872 aa12.8□□□□□ -0.36
PCNX4-207ENST00000553898 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
PCNX4-207ENST00000553898 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
PCNX4-207ENST00000553898 SSFA2P28290 1259 aa12.8□□□□□ -0.36
PCNX4-207ENST00000553898 RFC4P35249 363 aa12.8□□□□□ -0.36
PCNX4-207ENST00000553898 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
PCNX4-207ENST00000553898 RC3H1Q5TC82 1133 aaKnown RBP12.8□□□□□ -0.36
PCNX4-207ENST00000553898 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
PCNX4-207ENST00000553898 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms