RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.37
PSEN1-208ENST00000553719 PIGBQ92521 554 aa23.64■■□□□ 1.37
PSEN1-208ENST00000553719 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
PSEN1-208ENST00000553719 TEFQ10587 303 aa23.63■■□□□ 1.37
PSEN1-208ENST00000553719 ILDR2Q71H61 639 aa23.63■■□□□ 1.37
PSEN1-208ENST00000553719 WDR63Q8IWG1 891 aa23.63■■□□□ 1.37
PSEN1-208ENST00000553719 BCL11BQ9C0K0 894 aaPredicted RBP23.63■■□□□ 1.37
PSEN1-208ENST00000553719 TMOD3Q9NYL9 352 aa23.63■■□□□ 1.37
PSEN1-208ENST00000553719 KAT6BQ8WYB5 2073 aa23.63■■□□□ 1.37
PSEN1-208ENST00000553719 IL16Q14005 1332 aa23.62■■□□□ 1.37
PSEN1-208ENST00000553719 ZNF853P0CG23 659 aa23.62■■□□□ 1.37
PSEN1-208ENST00000553719 TAF7Q15545 349 aaPredicted RBP23.61■■□□□ 1.37
PSEN1-208ENST00000553719 KCPQ6ZWJ8 1503 aa23.6■■□□□ 1.37
PSEN1-208ENST00000553719 BABAM1Q9NWV8 329 aa23.6■■□□□ 1.37
PSEN1-208ENST00000553719 CHL1O00533 1208 aa23.59■■□□□ 1.37
PSEN1-208ENST00000553719 TRIM37O94972 964 aa23.59■■□□□ 1.37
PSEN1-208ENST00000553719 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
PSEN1-208ENST00000553719 SYTL4Q96C24 671 aaPredicted RBP23.59■■□□□ 1.37
PSEN1-208ENST00000553719 CFAP44Q96MT7 982 aa23.59■■□□□ 1.37
PSEN1-208ENST00000553719 SPINK5Q9NQ38 1064 aaPredicted RBP23.59■■□□□ 1.37
PSEN1-208ENST00000553719 IFT57Q9NWB7 429 aa23.59■■□□□ 1.37
PSEN1-208ENST00000553719 RGPD3A6NKT7 1758 aaPredicted RBP23.59■■□□□ 1.37
PSEN1-208ENST00000553719 RGPD4Q7Z3J3 1758 aa23.59■■□□□ 1.37
PSEN1-208ENST00000553719 LY75O60449 1722 aa23.59■■□□□ 1.37
PSEN1-208ENST00000553719 CICQ96RK0 1608 aaPredicted RBP23.58■■□□□ 1.36
PSEN1-208ENST00000553719 ATG3Q9NT62 314 aa23.56■■□□□ 1.36
PSEN1-208ENST00000553719 ZNF831Q5JPB2 1677 aa23.56■■□□□ 1.36
PSEN1-208ENST00000553719 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
PSEN1-208ENST00000553719 GNAI1P63096 354 aa23.55■■□□□ 1.36
PSEN1-208ENST00000553719 ASAP1Q9ULH1 1129 aa23.55■■□□□ 1.36
PSEN1-208ENST00000553719 GOLGA2Q08379 1002 aa23.54■■□□□ 1.36
PSEN1-208ENST00000553719 SLC39A6Q13433 755 aa23.54■■□□□ 1.36
PSEN1-208ENST00000553719 ZNF790Q6PG37 636 aa23.54■■□□□ 1.36
PSEN1-208ENST00000553719 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
PSEN1-208ENST00000553719 PALLDQ8WX93 1383 aa23.53■■□□□ 1.36
PSEN1-208ENST00000553719 HEG1Q9ULI3 1381 aa23.53■■□□□ 1.36
PSEN1-208ENST00000553719 KCNQ3O43525 872 aa23.53■■□□□ 1.36
PSEN1-208ENST00000553719 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
PSEN1-208ENST00000553719 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
PSEN1-208ENST00000553719 TSPYL4Q9UJ04 414 aa23.52■■□□□ 1.36
PSEN1-208ENST00000553719 SLFN5Q08AF3 891 aa23.51■■□□□ 1.35
PSEN1-208ENST00000553719 CDCA7LQ96GN5 454 aa23.51■■□□□ 1.35
PSEN1-208ENST00000553719 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
PSEN1-208ENST00000553719 TJP1Q07157 1748 aa23.5■■□□□ 1.35
PSEN1-208ENST00000553719 E9PSI1 815 aa23.5■■□□□ 1.35
PSEN1-208ENST00000553719 SMARCC1Q92922 1105 aaPredicted RBP23.5■■□□□ 1.35
PSEN1-208ENST00000553719 C5P01031 1676 aa23.49■■□□□ 1.35
PSEN1-208ENST00000553719 PLSCR1O15162 318 aa23.49■■□□□ 1.35
PSEN1-208ENST00000553719 EIF4A1P60842 406 aaKnown RBP23.49■■□□□ 1.35
PSEN1-208ENST00000553719 TSR2Q969E8 191 aaKnown RBP23.49■■□□□ 1.35
PSEN1-208ENST00000553719 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
PSEN1-208ENST00000553719 SLC4A9Q96Q91 983 aa23.49■■□□□ 1.35
PSEN1-208ENST00000553719 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
PSEN1-208ENST00000553719 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
PSEN1-208ENST00000553719 ZNF496Q96IT1 587 aaPredicted RBP23.48■■□□□ 1.35
PSEN1-208ENST00000553719 RREB1Q92766 1687 aa23.48■■□□□ 1.35
PSEN1-208ENST00000553719 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
PSEN1-208ENST00000553719 UPF1Q92900 1129 aaKnown RBP eCLIP23.47■■□□□ 1.35
PSEN1-208ENST00000553719 MYH16Q9H6N6 1097 aa23.47■■□□□ 1.35
PSEN1-208ENST00000553719 COL5A3P25940 1745 aaPredicted RBP23.47■■□□□ 1.35
PSEN1-208ENST00000553719 LAMB4A4D0S4 1761 aa23.46■■□□□ 1.35
PSEN1-208ENST00000553719 APBA3O96018 575 aa23.46■■□□□ 1.35
PSEN1-208ENST00000553719 DUSP27Q5VZP5 1158 aa23.46■■□□□ 1.35
PSEN1-208ENST00000553719 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
PSEN1-208ENST00000553719 TAF1LQ8IZX4 1826 aa23.45■■□□□ 1.34
PSEN1-208ENST00000553719 LOC102724428A0A0B4J2F2 783 aa23.44■■□□□ 1.34
PSEN1-208ENST00000553719 SIK1P57059 783 aa23.44■■□□□ 1.34
PSEN1-208ENST00000553719 VSIG10Q8N0Z9 540 aa23.44■■□□□ 1.34
PSEN1-208ENST00000553719 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
PSEN1-208ENST00000553719 KRT24Q2M2I5 525 aa23.43■■□□□ 1.34
PSEN1-208ENST00000553719 PROM2Q8N271 834 aa23.43■■□□□ 1.34
PSEN1-208ENST00000553719 CAMKK2Q96RR4 588 aa23.43■■□□□ 1.34
PSEN1-208ENST00000553719 GIGYF1O75420 1035 aaPredicted RBP23.41■■□□□ 1.34
PSEN1-208ENST00000553719 NUP188Q5SRE5 1749 aa23.4■■□□□ 1.34
PSEN1-208ENST00000553719 ITPK1Q13572 414 aa23.4■■□□□ 1.34
PSEN1-208ENST00000553719 TXNRD1Q16881 649 aa23.4■■□□□ 1.34
PSEN1-208ENST00000553719 C8orf58Q8NAV2 365 aa23.4■■□□□ 1.34
PSEN1-208ENST00000553719 RBM42Q9BTD8 480 aaKnown RBP23.4■■□□□ 1.34
PSEN1-208ENST00000553719 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
PSEN1-208ENST00000553719 PRAMEF22A3QJZ6 481 aa23.39■■□□□ 1.33
PSEN1-208ENST00000553719 HOXB7P09629 217 aa23.39■■□□□ 1.33
PSEN1-208ENST00000553719 SNRPA1P09661 255 aaKnown RBP23.39■■□□□ 1.33
PSEN1-208ENST00000553719 BAG6P46379 1132 aa23.39■■□□□ 1.33
PSEN1-208ENST00000553719 EN1Q05925 392 aaPredicted RBP23.39■■□□□ 1.33
PSEN1-208ENST00000553719 EXOSC9Q06265 439 aaKnown RBP23.39■■□□□ 1.33
PSEN1-208ENST00000553719 SF3B2Q13435 895 aaKnown RBP23.39■■□□□ 1.33
PSEN1-208ENST00000553719 SLC27A3Q5K4L6 730 aa23.39■■□□□ 1.33
PSEN1-208ENST00000553719 DEFB132Q7Z7B7 95 aa23.38■■□□□ 1.33
PSEN1-208ENST00000553719 TSPYL6Q8N831 410 aa23.38■■□□□ 1.33
PSEN1-208ENST00000553719 CCNL1Q9UK58 526 aaPredicted RBP23.38■■□□□ 1.33
PSEN1-208ENST00000553719 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
PSEN1-208ENST00000553719 ATP6V1AP38606 617 aa23.37■■□□□ 1.33
PSEN1-208ENST00000553719 DNAJC10Q8IXB1 793 aa23.37■■□□□ 1.33
PSEN1-208ENST00000553719 C4BP0C0L5 1744 aa23.36■■□□□ 1.33
PSEN1-208ENST00000553719 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
PSEN1-208ENST00000553719 MYH14Q7Z406 1995 aaKnown RBP23.36■■□□□ 1.33
PSEN1-208ENST00000553719 KCNQ4P56696 695 aa23.35■■□□□ 1.33
PSEN1-208ENST00000553719 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
PSEN1-208ENST00000553719 TEX13AQ9BXU3 409 aaPredicted RBP23.34■■□□□ 1.33
PSEN1-208ENST00000553719 USP16Q9Y5T5 823 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms