RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 USP54Q70EL1 1684 aa8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 TTC21AQ8NDW8 1320 aa8.53□□□□□ -1.04
LINC-ROR-201ENST00000553704 CLCN1P35523 988 aa8.52□□□□□ -1.04
LINC-ROR-201ENST00000553704 KLHL40Q2TBA0 621 aa8.52□□□□□ -1.04
LINC-ROR-201ENST00000553704 SKOR2Q2VWA4 1001 aaPredicted RBP8.52□□□□□ -1.04
LINC-ROR-201ENST00000553704 AMOTL2Q9Y2J4 779 aa8.52□□□□□ -1.04
LINC-ROR-201ENST00000553704 SLIT1O75093 1534 aa8.52□□□□□ -1.04
LINC-ROR-201ENST00000553704 LTN1O94822 1766 aa8.52□□□□□ -1.04
LINC-ROR-201ENST00000553704 ERC2O15083 957 aa8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 CCT4P50991 539 aaKnown RBP8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 FLIIQ13045 1269 aa8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 OSBPL3Q9H4L5 887 aa8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 PALD1Q9ULE6 856 aa8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 DDX49Q9Y6V7 483 aaKnown RBP8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 ARHGAP23Q9P227 1491 aa8.52□□□□□ -1.05
LINC-ROR-201ENST00000553704 HMMRO75330 724 aa8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 AMPHP49418 695 aa8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 LMBRD1Q9NUN5 540 aa8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 CACNA1FO60840 1977 aa8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 GNAI2P04899 355 aa8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 FKBP5Q13451 457 aaPredicted RBP8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 CASC1Q6TDU7 716 aa8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 NGDNQ8NEJ9 315 aaKnown RBP8.51□□□□□ -1.05
LINC-ROR-201ENST00000553704 ESPNB1AK53 854 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 REC8O95072 547 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 PTMSP20962 102 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 CAVIN1Q6NZI2 390 aaKnown RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 UNC5CLQ8IV45 518 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 IL25Q9H293 177 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 IBTKQ9P2D0 1353 aaPredicted RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 GOLGA6L22H0YM25 854 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 ST18O60284 1047 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 HOXC9P31274 260 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 GPT2Q8TD30 523 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 ESYT1Q9BSJ8 1104 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 FER1L4A9Z1Z3 1794 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 MAP3K5Q99683 1374 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 MX1P20591 662 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 NUCB2P80303 420 aa8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 LTV1Q96GA3 475 aaPredicted RBP8.5□□□□□ -1.05
LINC-ROR-201ENST00000553704 PXDNLA1KZ92 1463 aa8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 KDM3BQ7LBC6 1761 aa8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 NASPP49321 788 aaPredicted RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 NLRP6P59044 892 aa8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 ZSCAN23Q3MJ62 389 aa8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 NOL8Q76FK4 1167 aaKnown RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 LRRCC1Q9C099 1032 aa8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 NSFL1CQ9UNZ2 370 aaKnown RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 MED1Q15648 1581 aaPredicted RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 NAP1L5Q96NT1 182 aaPredicted RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 PHAXQ9H814 394 aaKnown RBP8.49□□□□□ -1.05
LINC-ROR-201ENST00000553704 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 CHMLP26374 656 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 NEK4P51957 841 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 ATP8B2P98198 1209 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 RILPL2Q969X0 211 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 TMX3Q96JJ7 454 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 IL1RAPL2Q9NP60 686 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 CRYBG1Q9Y4K1 1723 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 ZNF445P59923 1031 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 CCDC30Q5VVM6 783 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 USP44Q9H0E7 712 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
LINC-ROR-201ENST00000553704 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 GNAI3P08754 354 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 PPP1R9BQ96SB3 815 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 RBSNQ9H1K0 784 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 NFAT5O94916 1531 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 MAP4K4O95819 1239 aaPredicted RBP8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 KCNA6P17658 529 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 TRIM44Q96DX7 344 aaPredicted RBP8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 UPF3BQ9BZI7 483 aaKnown RBP8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 TBX22Q9Y458 520 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
LINC-ROR-201ENST00000553704 HTATSF1O43719 755 aaKnown RBP8.46□□□□□ -1.05
LINC-ROR-201ENST00000553704 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.05
LINC-ROR-201ENST00000553704 CCDC173Q0VFZ6 552 aa8.46□□□□□ -1.05
LINC-ROR-201ENST00000553704 STAP2Q9UGK3 403 aa8.46□□□□□ -1.05
LINC-ROR-201ENST00000553704 SOS1Q07889 1333 aaPredicted RBP8.46□□□□□ -1.06
LINC-ROR-201ENST00000553704 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
LINC-ROR-201ENST00000553704 PODXL2Q9NZ53 605 aa8.46□□□□□ -1.06
LINC-ROR-201ENST00000553704 LMO7Q8WWI1 1683 aa8.46□□□□□ -1.06
LINC-ROR-201ENST00000553704 UBTFL1P0CB47 393 aaPredicted RBP8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 CUL4AQ13619 759 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 TAF7Q15545 349 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms