RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 THUMPD2Q9BTF0 503 aaKnown RBP25.26■■□□□ 1.63
PSEN1-207ENST00000553599 ZBED9Q6R2W3 1325 aa25.26■■□□□ 1.63
PSEN1-207ENST00000553599 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
PSEN1-207ENST00000553599 GNAI1P63096 354 aa25.24■■□□□ 1.63
PSEN1-207ENST00000553599 PIGBQ92521 554 aa25.24■■□□□ 1.63
PSEN1-207ENST00000553599 IFT57Q9NWB7 429 aa25.24■■□□□ 1.63
PSEN1-207ENST00000553599 KAT6BQ8WYB5 2073 aa25.24■■□□□ 1.63
PSEN1-207ENST00000553599 KCNQ2O43526 872 aa25.23■■□□□ 1.63
PSEN1-207ENST00000553599 CFAP44Q96MT7 982 aa25.23■■□□□ 1.63
PSEN1-207ENST00000553599 BTBD11A6QL63 1104 aa25.21■■□□□ 1.63
PSEN1-207ENST00000553599 TRIM37O94972 964 aa25.21■■□□□ 1.63
PSEN1-207ENST00000553599 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
PSEN1-207ENST00000553599 CHL1O00533 1208 aa25.2■■□□□ 1.62
PSEN1-207ENST00000553599 ZNF853P0CG23 659 aa25.2■■□□□ 1.62
PSEN1-207ENST00000553599 CCDC125Q86Z20 511 aa25.2■■□□□ 1.62
PSEN1-207ENST00000553599 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
PSEN1-207ENST00000553599 EP400Q96L91 3159 aa25.19■■□□□ 1.62
PSEN1-207ENST00000553599 BTAF1O14981 1849 aa25.18■■□□□ 1.62
PSEN1-207ENST00000553599 PAPPAQ13219 1627 aa25.18■■□□□ 1.62
PSEN1-207ENST00000553599 E9PSI1 815 aa25.17■■□□□ 1.62
PSEN1-207ENST00000553599 ZNF790Q6PG37 636 aa25.17■■□□□ 1.62
PSEN1-207ENST00000553599 TTC5Q8N0Z6 440 aa25.17■■□□□ 1.62
PSEN1-207ENST00000553599 MYH16Q9H6N6 1097 aa25.17■■□□□ 1.62
PSEN1-207ENST00000553599 TSPYL4Q9UJ04 414 aa25.17■■□□□ 1.62
PSEN1-207ENST00000553599 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
PSEN1-207ENST00000553599 ATG3Q9NT62 314 aa25.15■■□□□ 1.62
PSEN1-207ENST00000553599 LAS1LQ9Y4W2 734 aaKnown RBP25.15■■□□□ 1.62
PSEN1-207ENST00000553599 SF3B2Q13435 895 aaKnown RBP25.14■■□□□ 1.62
PSEN1-207ENST00000553599 PTF1AQ7RTS3 328 aa25.14■■□□□ 1.62
PSEN1-207ENST00000553599 ASAP1Q9ULH1 1129 aa25.14■■□□□ 1.62
PSEN1-207ENST00000553599 TNS1Q9HBL0 1735 aaKnown RBP25.14■■□□□ 1.61
PSEN1-207ENST00000553599 PLSCR1O15162 318 aa25.13■■□□□ 1.61
PSEN1-207ENST00000553599 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
PSEN1-207ENST00000553599 SLFN5Q08AF3 891 aa25.12■■□□□ 1.61
PSEN1-207ENST00000553599 YTHDC1Q96MU7 727 aaKnown RBP25.12■■□□□ 1.61
PSEN1-207ENST00000553599 MIS18AQ9NYP9 233 aa25.12■■□□□ 1.61
PSEN1-207ENST00000553599 PALLDQ8WX93 1383 aa25.12■■□□□ 1.61
PSEN1-207ENST00000553599 UBR2Q8IWV8 1755 aa25.12■■□□□ 1.61
PSEN1-207ENST00000553599 HMGB2P26583 209 aaKnown RBP25.11■■□□□ 1.61
PSEN1-207ENST00000553599 SLC39A6Q13433 755 aa25.11■■□□□ 1.61
PSEN1-207ENST00000553599 ILDR2Q71H61 639 aa25.11■■□□□ 1.61
PSEN1-207ENST00000553599 FMNL2Q96PY5 1086 aa25.11■■□□□ 1.61
PSEN1-207ENST00000553599 APBA3O96018 575 aa25.1■■□□□ 1.61
PSEN1-207ENST00000553599 VSIG10Q8N0Z9 540 aa25.1■■□□□ 1.61
PSEN1-207ENST00000553599 RGPD3A6NKT7 1758 aaPredicted RBP25.1■■□□□ 1.61
PSEN1-207ENST00000553599 RGPD4Q7Z3J3 1758 aa25.1■■□□□ 1.61
PSEN1-207ENST00000553599 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
PSEN1-207ENST00000553599 EIF4A1P60842 406 aaKnown RBP25.09■■□□□ 1.61
PSEN1-207ENST00000553599 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
PSEN1-207ENST00000553599 SPINK5Q9NQ38 1064 aaPredicted RBP25.09■■□□□ 1.61
PSEN1-207ENST00000553599 ZNF831Q5JPB2 1677 aa25.09■■□□□ 1.61
PSEN1-207ENST00000553599 FANCIQ9NVI1 1328 aa25.09■■□□□ 1.61
PSEN1-207ENST00000553599 LY75O60449 1722 aa25.08■■□□□ 1.61
PSEN1-207ENST00000553599 KCNQ3O43525 872 aa25.07■■□□□ 1.6
PSEN1-207ENST00000553599 BAG6P46379 1132 aa25.07■■□□□ 1.6
PSEN1-207ENST00000553599 ZNF496Q96IT1 587 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-207ENST00000553599 SOS1Q07889 1333 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-207ENST00000553599 HEG1Q9ULI3 1381 aa25.06■■□□□ 1.6
PSEN1-207ENST00000553599 LOC102724428A0A0B4J2F2 783 aa25.06■■□□□ 1.6
PSEN1-207ENST00000553599 SIK1P57059 783 aa25.06■■□□□ 1.6
PSEN1-207ENST00000553599 TSR2Q969E8 191 aaKnown RBP25.06■■□□□ 1.6
PSEN1-207ENST00000553599 CDCA7LQ96GN5 454 aa25.06■■□□□ 1.6
PSEN1-207ENST00000553599 CICQ96RK0 1608 aaPredicted RBP25.05■■□□□ 1.6
PSEN1-207ENST00000553599 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
PSEN1-207ENST00000553599 HOXB7P09629 217 aa25.05■■□□□ 1.6
PSEN1-207ENST00000553599 SLC27A3Q5K4L6 730 aa25.05■■□□□ 1.6
PSEN1-207ENST00000553599 RBM42Q9BTD8 480 aaKnown RBP25.05■■□□□ 1.6
PSEN1-207ENST00000553599 TEX13AQ9BXU3 409 aaPredicted RBP25.05■■□□□ 1.6
PSEN1-207ENST00000553599 SNRPA1P09661 255 aaKnown RBP25.04■■□□□ 1.6
PSEN1-207ENST00000553599 UPF1Q92900 1129 aaKnown RBP eCLIP25.04■■□□□ 1.6
PSEN1-207ENST00000553599 CHMP4AQ9BY43 222 aa25.04■■□□□ 1.6
PSEN1-207ENST00000553599 DUSP27Q5VZP5 1158 aa25.03■■□□□ 1.6
PSEN1-207ENST00000553599 GIGYF1O75420 1035 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-207ENST00000553599 ATP6V1AP38606 617 aa25.01■■□□□ 1.59
PSEN1-207ENST00000553599 CCNL1Q9UK58 526 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-207ENST00000553599 TXNRD1Q16881 649 aa25■■□□□ 1.59
PSEN1-207ENST00000553599 CAMKK2Q96RR4 588 aa25■■□□□ 1.59
PSEN1-207ENST00000553599 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
PSEN1-207ENST00000553599 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
PSEN1-207ENST00000553599 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
PSEN1-207ENST00000553599 STARD3NLO95772 234 aa24.97■■□□□ 1.59
PSEN1-207ENST00000553599 C8orf58Q8NAV2 365 aa24.97■■□□□ 1.59
PSEN1-207ENST00000553599 TJP1Q07157 1748 aa24.97■■□□□ 1.59
PSEN1-207ENST00000553599 EN1Q05925 392 aaPredicted RBP24.96■■□□□ 1.59
PSEN1-207ENST00000553599 TWISTNBQ3B726 338 aaPredicted RBP24.96■■□□□ 1.59
PSEN1-207ENST00000553599 PROM2Q8N271 834 aa24.96■■□□□ 1.59
PSEN1-207ENST00000553599 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
PSEN1-207ENST00000553599 LAMB4A4D0S4 1761 aa24.95■■□□□ 1.59
PSEN1-207ENST00000553599 DNAJC10Q8IXB1 793 aa24.95■■□□□ 1.58
PSEN1-207ENST00000553599 C5P01031 1676 aa24.94■■□□□ 1.58
PSEN1-207ENST00000553599 ITPK1Q13572 414 aa24.94■■□□□ 1.58
PSEN1-207ENST00000553599 KRT24Q2M2I5 525 aa24.94■■□□□ 1.58
PSEN1-207ENST00000553599 ERBB4Q15303 1308 aa24.93■■□□□ 1.58
PSEN1-207ENST00000553599 EZH2Q15910 746 aaKnown RBP24.93■■□□□ 1.58
PSEN1-207ENST00000553599 DEFB132Q7Z7B7 95 aa24.93■■□□□ 1.58
PSEN1-207ENST00000553599 TSPYL6Q8N831 410 aa24.93■■□□□ 1.58
PSEN1-207ENST00000553599 LRRC4BQ9NT99 713 aa24.93■■□□□ 1.58
PSEN1-207ENST00000553599 RREB1Q92766 1687 aa24.93■■□□□ 1.58
PSEN1-207ENST00000553599 COL5A3P25940 1745 aaPredicted RBP24.92■■□□□ 1.58
PSEN1-207ENST00000553599 TAF1LQ8IZX4 1826 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms