RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 LOC102724428A0A0B4J2F2 783 aa24.55■■□□□ 1.52
CPSF2-202ENST00000553427 SIK1P57059 783 aa24.55■■□□□ 1.52
CPSF2-202ENST00000553427 PLEKHF1Q96S99 279 aa24.55■■□□□ 1.52
CPSF2-202ENST00000553427 LGR6Q9HBX8 967 aa24.55■■□□□ 1.52
CPSF2-202ENST00000553427 C5P01031 1676 aa24.55■■□□□ 1.52
CPSF2-202ENST00000553427 CEMIPQ8WUJ3 1361 aa24.54■■□□□ 1.52
CPSF2-202ENST00000553427 ZNF827Q17R98 1081 aa24.54■■□□□ 1.52
CPSF2-202ENST00000553427 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
CPSF2-202ENST00000553427 QSER1Q2KHR3 1735 aa24.54■■□□□ 1.52
CPSF2-202ENST00000553427 VIRMAQ69YN4 1812 aaKnown RBP24.53■■□□□ 1.52
CPSF2-202ENST00000553427 TAF1LQ8IZX4 1826 aa24.52■■□□□ 1.52
CPSF2-202ENST00000553427 NEFMP07197 916 aa24.52■■□□□ 1.52
CPSF2-202ENST00000553427 KCNQ4P56696 695 aa24.52■■□□□ 1.52
CPSF2-202ENST00000553427 HTATSF1O43719 755 aaKnown RBP24.51■■□□□ 1.51
CPSF2-202ENST00000553427 IL17REQ8NFR9 667 aa24.51■■□□□ 1.51
CPSF2-202ENST00000553427 CICQ96RK0 1608 aaPredicted RBP24.5■■□□□ 1.51
CPSF2-202ENST00000553427 C4BP0C0L5 1744 aa24.49■■□□□ 1.51
CPSF2-202ENST00000553427 SIPA1L3O60292 1781 aaPredicted RBP24.48■■□□□ 1.51
CPSF2-202ENST00000553427 MAPK8IP3Q9UPT6 1336 aa24.48■■□□□ 1.51
CPSF2-202ENST00000553427 ANP32CO43423 234 aa24.47■■□□□ 1.51
CPSF2-202ENST00000553427 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
CPSF2-202ENST00000553427 ATP6V1AP38606 617 aa24.46■■□□□ 1.51
CPSF2-202ENST00000553427 TEFQ10587 303 aa24.46■■□□□ 1.51
CPSF2-202ENST00000553427 ITPK1Q13572 414 aa24.46■■□□□ 1.51
CPSF2-202ENST00000553427 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
CPSF2-202ENST00000553427 RTF1Q92541 710 aaKnown RBP24.46■■□□□ 1.51
CPSF2-202ENST00000553427 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
CPSF2-202ENST00000553427 TUBGCP6Q96RT7 1819 aa24.46■■□□□ 1.51
CPSF2-202ENST00000553427 TFCP2L1Q9NZI6 479 aa24.45■■□□□ 1.5
CPSF2-202ENST00000553427 KCPQ6ZWJ8 1503 aa24.45■■□□□ 1.5
CPSF2-202ENST00000553427 PNPLA7Q6ZV29 1317 aa24.44■■□□□ 1.5
CPSF2-202ENST00000553427 LINC00116Q8NCU8 138 aa24.44■■□□□ 1.5
CPSF2-202ENST00000553427 RBM42Q9BTD8 480 aaKnown RBP24.43■■□□□ 1.5
CPSF2-202ENST00000553427 PDGFDQ9GZP0 370 aaPredicted RBP24.43■■□□□ 1.5
CPSF2-202ENST00000553427 UBR2Q8IWV8 1755 aa24.43■■□□□ 1.5
CPSF2-202ENST00000553427 COL5A3P25940 1745 aaPredicted RBP24.43■■□□□ 1.5
CPSF2-202ENST00000553427 PTCD1O75127 700 aaKnown RBP24.41■■□□□ 1.5
CPSF2-202ENST00000553427 FLAD1Q8NFF5 587 aa24.41■■□□□ 1.5
CPSF2-202ENST00000553427 SLC16A10Q8TF71 515 aa24.41■■□□□ 1.5
CPSF2-202ENST00000553427 AK7Q96M32 723 aa24.41■■□□□ 1.5
CPSF2-202ENST00000553427 SPON1Q9HCB6 807 aa24.41■■□□□ 1.5
CPSF2-202ENST00000553427 ADAMTS8Q9UP79 889 aa24.41■■□□□ 1.5
CPSF2-202ENST00000553427 CNTNAP4Q9C0A0 1308 aa24.4■■□□□ 1.5
CPSF2-202ENST00000553427 DLG5Q8TDM6 1919 aa24.4■■□□□ 1.5
CPSF2-202ENST00000553427 MCM10Q7L590 875 aa24.4■■□□□ 1.5
CPSF2-202ENST00000553427 MTFR1LQ9H019 292 aa24.4■■□□□ 1.5
CPSF2-202ENST00000553427 TJP1Q07157 1748 aa24.4■■□□□ 1.5
CPSF2-202ENST00000553427 UBR3Q6ZT12 1888 aa24.39■■□□□ 1.5
CPSF2-202ENST00000553427 SLC39A6Q13433 755 aa24.39■■□□□ 1.49
CPSF2-202ENST00000553427 RC3H1Q5TC82 1133 aaKnown RBP24.39■■□□□ 1.49
CPSF2-202ENST00000553427 VSIG10Q8N0Z9 540 aa24.39■■□□□ 1.49
CPSF2-202ENST00000553427 RUNDC1Q96C34 613 aa24.39■■□□□ 1.49
CPSF2-202ENST00000553427 SSFA2P28290 1259 aa24.38■■□□□ 1.49
CPSF2-202ENST00000553427 ZNF790Q6PG37 636 aa24.38■■□□□ 1.49
CPSF2-202ENST00000553427 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
CPSF2-202ENST00000553427 ZBTB7AO95365 584 aa24.36■■□□□ 1.49
CPSF2-202ENST00000553427 TMPOP42166 694 aaKnown RBP24.36■■□□□ 1.49
CPSF2-202ENST00000553427 DCTN1Q14203 1278 aa24.36■■□□□ 1.49
CPSF2-202ENST00000553427 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
CPSF2-202ENST00000553427 BTBD11A6QL63 1104 aa24.35■■□□□ 1.49
CPSF2-202ENST00000553427 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
CPSF2-202ENST00000553427 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
CPSF2-202ENST00000553427 GNPATO15228 680 aa24.34■■□□□ 1.49
CPSF2-202ENST00000553427 CCDC184Q52MB2 194 aa24.34■■□□□ 1.49
CPSF2-202ENST00000553427 CCDC146Q8IYE0 955 aa24.34■■□□□ 1.49
CPSF2-202ENST00000553427 HEG1Q9ULI3 1381 aa24.33■■□□□ 1.49
CPSF2-202ENST00000553427 PTGER2P43116 358 aa24.33■■□□□ 1.49
CPSF2-202ENST00000553427 RIPK4P57078 832 aa24.33■■□□□ 1.49
CPSF2-202ENST00000553427 TAF7Q15545 349 aaPredicted RBP24.33■■□□□ 1.49
CPSF2-202ENST00000553427 AMIGO3Q86WK7 504 aa24.33■■□□□ 1.49
CPSF2-202ENST00000553427 SGIP1Q9BQI5 828 aa24.33■■□□□ 1.49
CPSF2-202ENST00000553427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.32■■□□□ 1.48
CPSF2-202ENST00000553427 ADRA2BP18089 450 aa24.32■■□□□ 1.48
CPSF2-202ENST00000553427 DNAJC10Q8IXB1 793 aa24.32■■□□□ 1.48
CPSF2-202ENST00000553427 ZNF496Q96IT1 587 aaPredicted RBP24.32■■□□□ 1.48
CPSF2-202ENST00000553427 FMNL2Q96PY5 1086 aa24.32■■□□□ 1.48
CPSF2-202ENST00000553427 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
CPSF2-202ENST00000553427 CRKLP46109 303 aaKnown RBP24.31■■□□□ 1.48
CPSF2-202ENST00000553427 PNISRQ8TF01 805 aaKnown RBP24.31■■□□□ 1.48
CPSF2-202ENST00000553427 RTCBQ9Y3I0 505 aaKnown RBP24.31■■□□□ 1.48
CPSF2-202ENST00000553427 MYH14Q7Z406 1995 aaKnown RBP24.31■■□□□ 1.48
CPSF2-202ENST00000553427 RPS6KA4O75676 772 aa24.3■■□□□ 1.48
CPSF2-202ENST00000553427 CYP19A1P11511 503 aaPredicted RBP24.3■■□□□ 1.48
CPSF2-202ENST00000553427 TEX13AQ9BXU3 409 aaPredicted RBP24.29■■□□□ 1.48
CPSF2-202ENST00000553427 ATF5Q9Y2D1 282 aaPredicted RBP24.29■■□□□ 1.48
CPSF2-202ENST00000553427 INTS5Q6P9B9 1019 aaKnown RBP24.28■■□□□ 1.48
CPSF2-202ENST00000553427 CCDC87Q9NVE4 849 aa24.28■■□□□ 1.48
CPSF2-202ENST00000553427 KDM3BQ7LBC6 1761 aa24.28■■□□□ 1.48
CPSF2-202ENST00000553427 KCNQ3O43525 872 aa24.27■■□□□ 1.48
CPSF2-202ENST00000553427 PHF14O94880 888 aa24.27■■□□□ 1.48
CPSF2-202ENST00000553427 THUMPD2Q9BTF0 503 aaKnown RBP24.27■■□□□ 1.48
CPSF2-202ENST00000553427 MSH5O43196 834 aa24.26■■□□□ 1.47
CPSF2-202ENST00000553427 STARD3NLO95772 234 aa24.26■■□□□ 1.47
CPSF2-202ENST00000553427 BABAM1Q9NWV8 329 aa24.26■■□□□ 1.47
CPSF2-202ENST00000553427 RRP7AQ9Y3A4 280 aaKnown RBP24.26■■□□□ 1.47
CPSF2-202ENST00000553427 TRAPPC3LQ5T215 181 aa24.25■■□□□ 1.47
CPSF2-202ENST00000553427 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
CPSF2-202ENST00000553427 PPP1R1BQ9UD71 204 aaPredicted RBP24.24■■□□□ 1.47
CPSF2-202ENST00000553427 SOS1Q07889 1333 aaPredicted RBP24.24■■□□□ 1.47
CPSF2-202ENST00000553427 POLD1P28340 1107 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms