RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
CDK4-212ENST00000552388 COL24A1Q17RW2 1714 aa17.37■□□□□ 0.37
CDK4-212ENST00000552388 CCER2I3L3R5 266 aa17.36■□□□□ 0.37
CDK4-212ENST00000552388 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
CDK4-212ENST00000552388 PIGBQ92521 554 aa17.36■□□□□ 0.37
CDK4-212ENST00000552388 SGIP1Q9BQI5 828 aa17.36■□□□□ 0.37
CDK4-212ENST00000552388 PDGFDQ9GZP0 370 aaPredicted RBP17.36■□□□□ 0.37
CDK4-212ENST00000552388 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
CDK4-212ENST00000552388 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
CDK4-212ENST00000552388 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
CDK4-212ENST00000552388 HTATSF1O43719 755 aaKnown RBP17.35■□□□□ 0.37
CDK4-212ENST00000552388 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
CDK4-212ENST00000552388 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
CDK4-212ENST00000552388 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
CDK4-212ENST00000552388 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
CDK4-212ENST00000552388 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
CDK4-212ENST00000552388 CABP4P57796 275 aa17.34■□□□□ 0.37
CDK4-212ENST00000552388 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
CDK4-212ENST00000552388 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
CDK4-212ENST00000552388 PPP1R1BQ9UD71 204 aaPredicted RBP17.34■□□□□ 0.37
CDK4-212ENST00000552388 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
CDK4-212ENST00000552388 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.36
CDK4-212ENST00000552388 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
CDK4-212ENST00000552388 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
CDK4-212ENST00000552388 C5P01031 1676 aa17.32■□□□□ 0.36
CDK4-212ENST00000552388 SLC15A2Q16348 729 aa17.31■□□□□ 0.36
CDK4-212ENST00000552388 MIER1Q8N108 512 aa17.31■□□□□ 0.36
CDK4-212ENST00000552388 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
CDK4-212ENST00000552388 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
CDK4-212ENST00000552388 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
CDK4-212ENST00000552388 RIPK4P57078 832 aa17.3■□□□□ 0.36
CDK4-212ENST00000552388 MCM10Q7L590 875 aa17.3■□□□□ 0.36
CDK4-212ENST00000552388 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
CDK4-212ENST00000552388 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
CDK4-212ENST00000552388 TEFQ10587 303 aa17.29■□□□□ 0.36
CDK4-212ENST00000552388 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
CDK4-212ENST00000552388 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
CDK4-212ENST00000552388 ASAP1Q9ULH1 1129 aa17.29■□□□□ 0.36
CDK4-212ENST00000552388 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
CDK4-212ENST00000552388 APAF1O14727 1248 aa17.28■□□□□ 0.36
CDK4-212ENST00000552388 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
CDK4-212ENST00000552388 SLC27A3Q5K4L6 730 aa17.28■□□□□ 0.36
CDK4-212ENST00000552388 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
CDK4-212ENST00000552388 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
CDK4-212ENST00000552388 LMOD3Q0VAK6 560 aa17.27■□□□□ 0.36
CDK4-212ENST00000552388 STK32BQ9NY57 414 aa17.27■□□□□ 0.36
CDK4-212ENST00000552388 CHD4Q14839 1912 aa17.27■□□□□ 0.35
CDK4-212ENST00000552388 TJP1Q07157 1748 aa17.27■□□□□ 0.35
CDK4-212ENST00000552388 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
CDK4-212ENST00000552388 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
CDK4-212ENST00000552388 KCPQ6ZWJ8 1503 aa17.26■□□□□ 0.35
CDK4-212ENST00000552388 SYT17Q9BSW7 474 aa17.25■□□□□ 0.35
CDK4-212ENST00000552388 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
CDK4-212ENST00000552388 CCNL1Q9UK58 526 aaPredicted RBP17.25■□□□□ 0.35
CDK4-212ENST00000552388 TUBGCP6Q96RT7 1819 aa17.25■□□□□ 0.35
CDK4-212ENST00000552388 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
CDK4-212ENST00000552388 SIK1P57059 783 aa17.24■□□□□ 0.35
CDK4-212ENST00000552388 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
CDK4-212ENST00000552388 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
CDK4-212ENST00000552388 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
CDK4-212ENST00000552388 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
CDK4-212ENST00000552388 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
CDK4-212ENST00000552388 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
CDK4-212ENST00000552388 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
CDK4-212ENST00000552388 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
CDK4-212ENST00000552388 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
CDK4-212ENST00000552388 ZNF827Q17R98 1081 aa17.22■□□□□ 0.35
CDK4-212ENST00000552388 ZNF790Q6PG37 636 aa17.22■□□□□ 0.35
CDK4-212ENST00000552388 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
CDK4-212ENST00000552388 SLC4A9Q96Q91 983 aa17.22■□□□□ 0.35
CDK4-212ENST00000552388 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
CDK4-212ENST00000552388 KCNQ4P56696 695 aa17.21■□□□□ 0.35
CDK4-212ENST00000552388 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
CDK4-212ENST00000552388 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
CDK4-212ENST00000552388 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
CDK4-212ENST00000552388 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
CDK4-212ENST00000552388 ATP6V1AP38606 617 aa17.2■□□□□ 0.34
CDK4-212ENST00000552388 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
CDK4-212ENST00000552388 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
CDK4-212ENST00000552388 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
CDK4-212ENST00000552388 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
CDK4-212ENST00000552388 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
CDK4-212ENST00000552388 ITPK1Q13572 414 aa17.19■□□□□ 0.34
CDK4-212ENST00000552388 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
CDK4-212ENST00000552388 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
CDK4-212ENST00000552388 KCNQ3O43525 872 aa17.18■□□□□ 0.34
CDK4-212ENST00000552388 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
CDK4-212ENST00000552388 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
CDK4-212ENST00000552388 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
CDK4-212ENST00000552388 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
CDK4-212ENST00000552388 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
CDK4-212ENST00000552388 LINC00116Q8NCU8 138 aa17.16■□□□□ 0.34
CDK4-212ENST00000552388 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
CDK4-212ENST00000552388 ARXQ96QS3 562 aa17.16■□□□□ 0.34
CDK4-212ENST00000552388 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
CDK4-212ENST00000552388 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
CDK4-212ENST00000552388 SLC16A10Q8TF71 515 aa17.15■□□□□ 0.34
CDK4-212ENST00000552388 CHL1O00533 1208 aa17.14■□□□□ 0.33
CDK4-212ENST00000552388 ZNF853P0CG23 659 aa17.14■□□□□ 0.33
CDK4-212ENST00000552388 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms