RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-223ENST00000552352 MTERF4Q7Z6M4 381 aaKnown RBP9.84□□□□□ -0.83
RPH3A-223ENST00000552352 SIRT2Q8IXJ6 389 aa9.84□□□□□ -0.83
RPH3A-223ENST00000552352 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
RPH3A-223ENST00000552352 ABCC4O15439 1325 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 FLT4P35916 1363 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
RPH3A-223ENST00000552352 KDRP35968 1356 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 UQCRHLA0A096LP55 91 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 UQCRHP07919 91 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 KCNA6P17658 529 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
RPH3A-223ENST00000552352 GNAI1P63096 354 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 FAM13BQ9NYF5 915 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 DLG5Q8TDM6 1919 aa9.83□□□□□ -0.84
RPH3A-223ENST00000552352 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
RPH3A-223ENST00000552352 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
RPH3A-223ENST00000552352 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
RPH3A-223ENST00000552352 NPHP4O75161 1426 aaPredicted RBP9.82□□□□□ -0.84
RPH3A-223ENST00000552352 DYNC1I1O14576 645 aa9.82□□□□□ -0.84
RPH3A-223ENST00000552352 XPCQ01831 940 aaPredicted RBP9.82□□□□□ -0.84
RPH3A-223ENST00000552352 EIF4A2Q14240 407 aaKnown RBP9.82□□□□□ -0.84
RPH3A-223ENST00000552352 CCDC39Q9UFE4 941 aa9.82□□□□□ -0.84
RPH3A-223ENST00000552352 GPT2Q8TD30 523 aa9.82□□□□□ -0.84
RPH3A-223ENST00000552352 USP26Q9BXU7 913 aa9.82□□□□□ -0.84
RPH3A-223ENST00000552352 VAMP4O75379 141 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 PKP1Q13835 747 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 RRS1Q15050 365 aaKnown RBP9.81□□□□□ -0.84
RPH3A-223ENST00000552352 TTC22Q5TAA0 569 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 INTS3Q68E01 1043 aaKnown RBP9.81□□□□□ -0.84
RPH3A-223ENST00000552352 LRSAM1Q6UWE0 723 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 PHACTR3Q96KR7 559 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 PRDM4Q9UKN5 801 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 ST18O60284 1047 aa9.81□□□□□ -0.84
RPH3A-223ENST00000552352 PRPF40AO75400 957 aaKnown RBP9.81□□□□□ -0.84
RPH3A-223ENST00000552352 SASS6Q6UVJ0 657 aa9.8□□□□□ -0.84
RPH3A-223ENST00000552352 FBLN1P23142 703 aa9.8□□□□□ -0.84
RPH3A-223ENST00000552352 MST1RQ04912 1400 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 LRRC37A3O60309 1634 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
RPH3A-223ENST00000552352 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
RPH3A-223ENST00000552352 RBM27Q9P2N5 1060 aaKnown RBP9.79□□□□□ -0.84
RPH3A-223ENST00000552352 ZDHHC9Q9Y397 364 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 MAP3K19Q56UN5 1328 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 IGSF1Q8N6C5 1336 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 KIAA0232Q92628 1395 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 HMOX1P09601 288 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
RPH3A-223ENST00000552352 API5Q9BZZ5 524 aaKnown RBP9.79□□□□□ -0.84
RPH3A-223ENST00000552352 DCTPP1Q9H773 170 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 TMEM63CQ9P1W3 806 aa9.79□□□□□ -0.84
RPH3A-223ENST00000552352 MBD3O95983 291 aa9.78□□□□□ -0.84
RPH3A-223ENST00000552352 ZGPATQ8N5A5 531 aaKnown RBP9.78□□□□□ -0.84
RPH3A-223ENST00000552352 NFAT5O94916 1531 aa9.78□□□□□ -0.84
RPH3A-223ENST00000552352 SYCE3A1L190 88 aa9.78□□□□□ -0.84
RPH3A-223ENST00000552352 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
RPH3A-223ENST00000552352 TSPYL6Q8N831 410 aa9.78□□□□□ -0.84
RPH3A-223ENST00000552352 KIF1AQ12756 1690 aa9.77□□□□□ -0.84
RPH3A-223ENST00000552352 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
RPH3A-223ENST00000552352 REC8O95072 547 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
RPH3A-223ENST00000552352 MBIPQ9NS73 344 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 SLIT3O75094 1523 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 CRB1P82279 1406 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 SDSP20132 328 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 KIAA2012Q0VF49 1180 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 SULT6B1Q6IMI4 303 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 PHF8Q9UPP1 1060 aa9.76□□□□□ -0.85
RPH3A-223ENST00000552352 ATP10DQ9P241 1426 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 CHL1O00533 1208 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 HSP90AB2PQ58FF8 381 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 NSFL1CQ9UNZ2 370 aaKnown RBP9.75□□□□□ -0.85
RPH3A-223ENST00000552352 DCCP43146 1447 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 SOS1Q07889 1333 aaPredicted RBP9.75□□□□□ -0.85
RPH3A-223ENST00000552352 C16orf71Q8IYS4 520 aaPredicted RBP9.75□□□□□ -0.85
RPH3A-223ENST00000552352 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
RPH3A-223ENST00000552352 NCAPD2Q15021 1401 aa9.75□□□□□ -0.85
RPH3A-223ENST00000552352 TSPY26PQ9H489 355 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 BABAM1Q9NWV8 329 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 TRPM3Q9HCF6 1732 aaPredicted RBP9.74□□□□□ -0.85
RPH3A-223ENST00000552352 NUTM2FA1L443 756 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 ERC2O15083 957 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 MCM2P49736 904 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 AEBP1Q8IUX7 1158 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 MYRIPQ8NFW9 859 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 SYAP1Q96A49 352 aaPredicted RBP9.74□□□□□ -0.85
RPH3A-223ENST00000552352 CCDC94Q9BW85 323 aaPredicted RBP9.74□□□□□ -0.85
RPH3A-223ENST00000552352 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
RPH3A-223ENST00000552352 CAMTA1Q9Y6Y1 1673 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
RPH3A-223ENST00000552352 BRD1O95696 1058 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 PTMAP06454 111 aaKnown RBP9.73□□□□□ -0.85
RPH3A-223ENST00000552352 HOXC9P31274 260 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 RPAP2Q8IXW5 612 aaPredicted RBP9.73□□□□□ -0.85
RPH3A-223ENST00000552352 RNF214Q8ND24 703 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 OTUD7AQ8TE49 926 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms