RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 CYP27B1O15528 508 aa14.79□□□□□ -0.04
SLC48A1-209ENST00000552003 HOXC9P31274 260 aa14.79□□□□□ -0.04
SLC48A1-209ENST00000552003 MAP3K19Q56UN5 1328 aa14.79□□□□□ -0.04
SLC48A1-209ENST00000552003 TNRC18O15417 2968 aaPredicted RBP14.77□□□□□ -0.04
SLC48A1-209ENST00000552003 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.04
SLC48A1-209ENST00000552003 LOC102724428A0A0B4J2F2 783 aa14.77□□□□□ -0.05
SLC48A1-209ENST00000552003 SIK1P57059 783 aa14.77□□□□□ -0.05
SLC48A1-209ENST00000552003 RASSF7Q02833 373 aa14.77□□□□□ -0.05
SLC48A1-209ENST00000552003 VEGFAP15692 232 aaPredicted RBP14.76□□□□□ -0.05
SLC48A1-209ENST00000552003 RGS19P49795 217 aa14.76□□□□□ -0.05
SLC48A1-209ENST00000552003 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
SLC48A1-209ENST00000552003 PIM2Q9P1W9 311 aa14.76□□□□□ -0.05
SLC48A1-209ENST00000552003 GLTPD2A6NH11 291 aa14.75□□□□□ -0.05
SLC48A1-209ENST00000552003 GYS1P13807 737 aa14.75□□□□□ -0.05
SLC48A1-209ENST00000552003 CHRNA5P30532 468 aa14.75□□□□□ -0.05
SLC48A1-209ENST00000552003 LBX1P52954 281 aa14.75□□□□□ -0.05
SLC48A1-209ENST00000552003 PDE4DIPQ5VU43 2346 aa14.75□□□□□ -0.05
SLC48A1-209ENST00000552003 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 TMF1P82094 1093 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 DALRD3Q5D0E6 543 aaKnown RBP14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 NLGN1Q8N2Q7 840 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 SLC12A5Q9H2X9 1139 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 CREBZFQ9NS37 354 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 CCDC87Q9NVE4 849 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
SLC48A1-209ENST00000552003 VIRMAQ69YN4 1812 aaKnown RBP14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 POTEJP0CG39 1038 aa14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 CTCFP49711 727 aaPredicted RBP14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 MLLT1Q03111 559 aaPredicted RBP14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 SLC4A9Q96Q91 983 aa14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
SLC48A1-209ENST00000552003 CGNL1Q0VF96 1302 aa14.72□□□□□ -0.05
SLC48A1-209ENST00000552003 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
SLC48A1-209ENST00000552003 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
SLC48A1-209ENST00000552003 WBP1LQ9NX94 342 aa14.72□□□□□ -0.05
SLC48A1-209ENST00000552003 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
SLC48A1-209ENST00000552003 ATP6V1AP38606 617 aa14.71□□□□□ -0.05
SLC48A1-209ENST00000552003 RAPGEF4Q8WZA2 1011 aa14.71□□□□□ -0.05
SLC48A1-209ENST00000552003 TIAM2Q8IVF5 1701 aa14.71□□□□□ -0.05
SLC48A1-209ENST00000552003 A0A1W2PP64 1363 aa14.71□□□□□ -0.06
SLC48A1-209ENST00000552003 MYH14Q7Z406 1995 aaKnown RBP14.71□□□□□ -0.06
SLC48A1-209ENST00000552003 HSPA8P11142 646 aaKnown RBP14.7□□□□□ -0.06
SLC48A1-209ENST00000552003 TATP17735 454 aaPredicted RBP14.7□□□□□ -0.06
SLC48A1-209ENST00000552003 AMPHP49418 695 aa14.7□□□□□ -0.06
SLC48A1-209ENST00000552003 VEGFBP49765 207 aa14.7□□□□□ -0.06
SLC48A1-209ENST00000552003 DDR1Q08345 913 aa14.7□□□□□ -0.06
SLC48A1-209ENST00000552003 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
SLC48A1-209ENST00000552003 ZC3H4Q9UPT8 1303 aaKnown RBP14.69□□□□□ -0.06
SLC48A1-209ENST00000552003 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
SLC48A1-209ENST00000552003 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
SLC48A1-209ENST00000552003 PARP3Q9Y6F1 533 aa14.69□□□□□ -0.06
SLC48A1-209ENST00000552003 RRS1Q15050 365 aaKnown RBP14.68□□□□□ -0.06
SLC48A1-209ENST00000552003 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
SLC48A1-209ENST00000552003 KDRP35968 1356 aa14.68□□□□□ -0.06
SLC48A1-209ENST00000552003 CCDC85CA6NKD9 419 aa14.67□□□□□ -0.06
SLC48A1-209ENST00000552003 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
SLC48A1-209ENST00000552003 COL5A3P25940 1745 aaPredicted RBP14.66□□□□□ -0.06
SLC48A1-209ENST00000552003 LMNB1P20700 586 aa14.66□□□□□ -0.06
SLC48A1-209ENST00000552003 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
SLC48A1-209ENST00000552003 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
SLC48A1-209ENST00000552003 NFKBIEO00221 500 aa14.65□□□□□ -0.06
SLC48A1-209ENST00000552003 FKBP8Q14318 412 aa14.65□□□□□ -0.06
SLC48A1-209ENST00000552003 HSP90AB2PQ58FF8 381 aa14.65□□□□□ -0.06
SLC48A1-209ENST00000552003 HDGFL2Q7Z4V5 671 aaPredicted RBP14.65□□□□□ -0.06
SLC48A1-209ENST00000552003 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
SLC48A1-209ENST00000552003 SRP68Q9UHB9 627 aaKnown RBP14.65□□□□□ -0.06
SLC48A1-209ENST00000552003 RTL1A6NKG5 1358 aa14.63□□□□□ -0.07
SLC48A1-209ENST00000552003 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
SLC48A1-209ENST00000552003 RPS6KA4O75676 772 aa14.63□□□□□ -0.07
SLC48A1-209ENST00000552003 RFC4P35249 363 aa14.62□□□□□ -0.07
SLC48A1-209ENST00000552003 RC3H1Q5TC82 1133 aaKnown RBP14.62□□□□□ -0.07
SLC48A1-209ENST00000552003 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
SLC48A1-209ENST00000552003 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
SLC48A1-209ENST00000552003 COG3Q96JB2 828 aa14.62□□□□□ -0.07
SLC48A1-209ENST00000552003 TMOD3Q9NYL9 352 aa14.62□□□□□ -0.07
SLC48A1-209ENST00000552003 POLRMTO00411 1230 aaKnown RBP14.61□□□□□ -0.07
SLC48A1-209ENST00000552003 ZNF831Q5JPB2 1677 aa14.61□□□□□ -0.07
SLC48A1-209ENST00000552003 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
SLC48A1-209ENST00000552003 DICER1Q9UPY3 1922 aaKnown RBP14.6□□□□□ -0.07
SLC48A1-209ENST00000552003 DLEC1Q9Y238 1755 aa14.6□□□□□ -0.07
SLC48A1-209ENST00000552003 AFDNP55196 1824 aaKnown RBP14.6□□□□□ -0.07
SLC48A1-209ENST00000552003 ITGBL1O95965 494 aaPredicted RBP14.6□□□□□ -0.07
SLC48A1-209ENST00000552003 TM4SF1P30408 202 aa14.6□□□□□ -0.07
SLC48A1-209ENST00000552003 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
SLC48A1-209ENST00000552003 NCAPD2Q15021 1401 aa14.59□□□□□ -0.07
SLC48A1-209ENST00000552003 TERF2IPQ9NYB0 399 aa14.59□□□□□ -0.07
SLC48A1-209ENST00000552003 ROCK2O75116 1388 aaKnown RBP14.59□□□□□ -0.07
SLC48A1-209ENST00000552003 INSRP06213 1382 aa14.59□□□□□ -0.07
SLC48A1-209ENST00000552003 USP42Q9H9J4 1324 aaKnown RBP14.58□□□□□ -0.08
SLC48A1-209ENST00000552003 TMEM88BA6NKF7 163 aa14.57□□□□□ -0.08
SLC48A1-209ENST00000552003 DDNO94850 711 aaPredicted RBP14.57□□□□□ -0.08
SLC48A1-209ENST00000552003 SMG6Q86US8 1419 aaKnown RBP14.57□□□□□ -0.08
SLC48A1-209ENST00000552003 PHKG2P15735 406 aa14.56□□□□□ -0.08
SLC48A1-209ENST00000552003 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
SLC48A1-209ENST00000552003 NRXN2Q9P2S2 1712 aa14.55□□□□□ -0.08
SLC48A1-209ENST00000552003 FER1L6Q2WGJ9 1857 aa14.55□□□□□ -0.08
SLC48A1-209ENST00000552003 RASSF10A6NK89 507 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms