RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 TSPYL6Q8N831 410 aa10.15□□□□□ -0.78
RAB3IP-215ENST00000551641 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
RAB3IP-215ENST00000551641 GCC1Q96CN9 775 aa10.15□□□□□ -0.78
RAB3IP-215ENST00000551641 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.79
RAB3IP-215ENST00000551641 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.79
RAB3IP-215ENST00000551641 JCADQ9P266 1359 aa10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 RBM25P49756 843 aaKnown RBP10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 SLKQ9H2G2 1235 aaPredicted RBP10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 IGSF1Q8N6C5 1336 aa10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 DLG5Q8TDM6 1919 aa10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 SLIT3O75094 1523 aa10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 RTF1Q92541 710 aaKnown RBP10.14□□□□□ -0.79
RAB3IP-215ENST00000551641 CAMTA1Q9Y6Y1 1673 aa10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 MFAP1P55081 439 aaKnown RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 COL16A1Q07092 1604 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 RGPD2P0DJD1 1756 aa10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 TWISTNBQ3B726 338 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 FAM182BQ5T319 152 aa10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 AHDC1Q5TGY3 1603 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 RNF216Q9NWF9 866 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 PHRF1Q9P1Y6 1649 aaKnown RBP10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 USP21Q9UK80 565 aa10.13□□□□□ -0.79
RAB3IP-215ENST00000551641 RTL1A6NKG5 1358 aa10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 MAPK8IP2Q13387 824 aaPredicted RBP10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 SIRT2Q8IXJ6 389 aa10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 C8orf58Q8NAV2 365 aa10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 SNX21Q969T3 373 aa10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 API5Q9BZZ5 524 aaKnown RBP10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 LNPKQ9C0E8 428 aa10.12□□□□□ -0.79
RAB3IP-215ENST00000551641 RGPD1P0DJD0 1748 aa10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 C1orf141Q5JVX7 400 aa10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 LGR6Q9HBX8 967 aa10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 SYTL4Q96C24 671 aaPredicted RBP10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 DDIT3P35638 169 aa10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 CHMP5Q9NZZ3 219 aa10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
RAB3IP-215ENST00000551641 CPDO75976 1380 aa10.1□□□□□ -0.79
RAB3IP-215ENST00000551641 AFF2P51816 1311 aa10.1□□□□□ -0.79
RAB3IP-215ENST00000551641 NECTIN2Q92692 538 aa10.1□□□□□ -0.79
RAB3IP-215ENST00000551641 RGS12O14924 1447 aa10.1□□□□□ -0.79
RAB3IP-215ENST00000551641 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 IL2RBP14784 551 aa10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 KRT24Q2M2I5 525 aa10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 GAS2L2Q8NHY3 880 aa10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 LRP6O75581 1613 aa10.09□□□□□ -0.79
RAB3IP-215ENST00000551641 CHL1O00533 1208 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 HSCBQ8IWL3 235 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 MCM4P33991 863 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 UNC5CLQ8IV45 518 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 ACSBG1Q96GR2 724 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 KIF2CQ99661 725 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 CARD10Q9BWT7 1032 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 MEGF6O75095 1541 aa10.08□□□□□ -0.8
RAB3IP-215ENST00000551641 ATP10DQ9P241 1426 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 TEFQ10587 303 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 IL17REQ8NFR9 667 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 DCTPP1Q9H773 170 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 CRB1P82279 1406 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 SPATA31A6Q5VVP1 1343 aa10.07□□□□□ -0.8
RAB3IP-215ENST00000551641 CYP27B1O15528 508 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 SLC39A6Q13433 755 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 QTRT2Q9H974 415 aaKnown RBP10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 ABCA3Q99758 1704 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 KDRP35968 1356 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 EXOC5O00471 708 aa10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
RAB3IP-215ENST00000551641 PTPRCP08575 1304 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 KCNQ3O43525 872 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 CRYBG1Q9Y4K1 1723 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 EIF5BO60841 1220 aaKnown RBP10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 DDB1Q16531 1140 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 AMOTQ4VCS5 1084 aa10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 L1TD1Q5T7N2 865 aaKnown RBP10.05□□□□□ -0.8
RAB3IP-215ENST00000551641 MAP3K5Q99683 1374 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 COL18A1P39060 1754 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 PLEKHM2Q8IWE5 1019 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 IFNL2Q8IZJ0 200 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 USP54Q70EL1 1684 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 CDC45O75419 566 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 GSPT1P15170 499 aaKnown RBP10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 PHKG2P15735 406 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms