RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 FAM161AQ3B820 660 aa26.11■■□□□ 1.77
NPAS3-210ENST00000551492 KAT6BQ8WYB5 2073 aa26.11■■□□□ 1.77
NPAS3-210ENST00000551492 MBIPQ9NS73 344 aa26.11■■□□□ 1.77
NPAS3-210ENST00000551492 NCOA3Q9Y6Q9 1424 aa26.1■■□□□ 1.77
NPAS3-210ENST00000551492 CGNQ9P2M7 1197 aaKnown RBP26.09■■□□□ 1.77
NPAS3-210ENST00000551492 KIF20AO95235 890 aa26.09■■□□□ 1.77
NPAS3-210ENST00000551492 WDR63Q8IWG1 891 aa26.09■■□□□ 1.77
NPAS3-210ENST00000551492 PANK1Q8TE04 598 aa26.09■■□□□ 1.77
NPAS3-210ENST00000551492 ERBB3P21860 1342 aa26.08■■□□□ 1.77
NPAS3-210ENST00000551492 CBX1P83916 185 aa26.08■■□□□ 1.77
NPAS3-210ENST00000551492 C8orf58Q8NAV2 365 aa26.08■■□□□ 1.77
NPAS3-210ENST00000551492 CRBNQ96SW2 442 aa26.08■■□□□ 1.77
NPAS3-210ENST00000551492 LARP1Q6PKG0 1096 aaKnown RBP26.08■■□□□ 1.77
NPAS3-210ENST00000551492 RGS22Q8NE09 1264 aa26.08■■□□□ 1.77
NPAS3-210ENST00000551492 LTBP4Q8N2S1 1624 aa26.08■■□□□ 1.77
NPAS3-210ENST00000551492 TOM1L2Q6ZVM7 507 aa26.07■■□□□ 1.76
NPAS3-210ENST00000551492 CCDC94Q9BW85 323 aaPredicted RBP26.07■■□□□ 1.76
NPAS3-210ENST00000551492 IGSF3O75054 1194 aa26.06■■□□□ 1.76
NPAS3-210ENST00000551492 IL17REQ8NFR9 667 aa26.06■■□□□ 1.76
NPAS3-210ENST00000551492 DLG5Q8TDM6 1919 aa26.06■■□□□ 1.76
NPAS3-210ENST00000551492 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.06■■□□□ 1.76
NPAS3-210ENST00000551492 RTF1Q92541 710 aaKnown RBP26.06■■□□□ 1.76
NPAS3-210ENST00000551492 BTG4Q9NY30 223 aa26.05■■□□□ 1.76
NPAS3-210ENST00000551492 EVA1CP58658 441 aa26.05■■□□□ 1.76
NPAS3-210ENST00000551492 ZNF530Q6P9A1 599 aaPredicted RBP26.05■■□□□ 1.76
NPAS3-210ENST00000551492 SPRYD3Q8NCJ5 442 aa26.05■■□□□ 1.76
NPAS3-210ENST00000551492 CCDC27Q2M243 656 aa26.04■■□□□ 1.76
NPAS3-210ENST00000551492 TRAK2O60296 914 aa26.03■■□□□ 1.76
NPAS3-210ENST00000551492 ZNF428Q96B54 188 aa26.03■■□□□ 1.76
NPAS3-210ENST00000551492 KIF1AQ12756 1690 aa26.03■■□□□ 1.76
NPAS3-210ENST00000551492 ALS2Q96Q42 1657 aa26.03■■□□□ 1.76
NPAS3-210ENST00000551492 KCNQ3O43525 872 aa26.03■■□□□ 1.76
NPAS3-210ENST00000551492 RARSP54136 660 aaKnown RBP26.02■■□□□ 1.76
NPAS3-210ENST00000551492 ANTXR1Q9H6X2 564 aa26.02■■□□□ 1.76
NPAS3-210ENST00000551492 KCNG1Q9UIX4 513 aa26.02■■□□□ 1.76
NPAS3-210ENST00000551492 EP400Q96L91 3159 aa26.02■■□□□ 1.76
NPAS3-210ENST00000551492 IRX3P78415 501 aaPredicted RBP26.02■■□□□ 1.76
NPAS3-210ENST00000551492 SSH1Q8WYL5 1049 aa26.02■■□□□ 1.76
NPAS3-210ENST00000551492 ROBO1Q9Y6N7 1651 aa26.02■■□□□ 1.76
NPAS3-210ENST00000551492 TOM1O60784 492 aa26.01■■□□□ 1.75
NPAS3-210ENST00000551492 MCM4P33991 863 aa26.01■■□□□ 1.75
NPAS3-210ENST00000551492 ARHGEF10O15013 1369 aa26.01■■□□□ 1.75
NPAS3-210ENST00000551492 COG6Q9Y2V7 657 aa26■■□□□ 1.75
NPAS3-210ENST00000551492 RLBP1P12271 317 aa26■■□□□ 1.75
NPAS3-210ENST00000551492 SMC4Q9NTJ3 1288 aa26■■□□□ 1.75
NPAS3-210ENST00000551492 RNF216Q9NWF9 866 aaPredicted RBP26■■□□□ 1.75
NPAS3-210ENST00000551492 TERF1P54274 439 aa25.99■■□□□ 1.75
NPAS3-210ENST00000551492 GAS2L3Q86XJ1 694 aa25.99■■□□□ 1.75
NPAS3-210ENST00000551492 DDX54Q8TDD1 881 aaKnown RBP25.99■■□□□ 1.75
NPAS3-210ENST00000551492 GTPBP4Q9BZE4 634 aaKnown RBP25.99■■□□□ 1.75
NPAS3-210ENST00000551492 LETM1O95202 739 aaPredicted RBP25.99■■□□□ 1.75
NPAS3-210ENST00000551492 GNAT3A8MTJ3 354 aa25.98■■□□□ 1.75
NPAS3-210ENST00000551492 ZBTB9Q96C00 473 aa25.98■■□□□ 1.75
NPAS3-210ENST00000551492 KDRP35968 1356 aa25.98■■□□□ 1.75
NPAS3-210ENST00000551492 MTERF4Q7Z6M4 381 aaKnown RBP25.97■■□□□ 1.75
NPAS3-210ENST00000551492 ZSCAN30Q86W11 494 aa25.97■■□□□ 1.75
NPAS3-210ENST00000551492 JARID2Q92833 1246 aaPredicted RBP25.97■■□□□ 1.75
NPAS3-210ENST00000551492 RAPGEF4Q8WZA2 1011 aa25.97■■□□□ 1.75
NPAS3-210ENST00000551492 A0A0G2JS52 829 aa25.96■■□□□ 1.75
NPAS3-210ENST00000551492 TSPYL4Q9UJ04 414 aa25.96■■□□□ 1.75
NPAS3-210ENST00000551492 SLIT3O75094 1523 aa25.96■■□□□ 1.75
NPAS3-210ENST00000551492 MSNP26038 577 aaKnown RBP25.95■■□□□ 1.74
NPAS3-210ENST00000551492 SLC39A6Q13433 755 aa25.95■■□□□ 1.74
NPAS3-210ENST00000551492 CHMP4CQ96CF2 233 aa25.95■■□□□ 1.74
NPAS3-210ENST00000551492 CAMTA1Q9Y6Y1 1673 aa25.94■■□□□ 1.74
NPAS3-210ENST00000551492 CFAP44Q96MT7 982 aa25.94■■□□□ 1.74
NPAS3-210ENST00000551492 RGPD1P0DJD0 1748 aa25.93■■□□□ 1.74
NPAS3-210ENST00000551492 CCDC9Q9Y3X0 531 aaKnown RBP25.93■■□□□ 1.74
NPAS3-210ENST00000551492 GAS2L2Q8NHY3 880 aa25.93■■□□□ 1.74
NPAS3-210ENST00000551492 PRAMEF22A3QJZ6 481 aa25.92■■□□□ 1.74
NPAS3-210ENST00000551492 IRX5P78411 483 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-210ENST00000551492 TWISTNBQ3B726 338 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-210ENST00000551492 NOB1Q9ULX3 412 aaKnown RBP25.92■■□□□ 1.74
NPAS3-210ENST00000551492 GNAI1P63096 354 aa25.92■■□□□ 1.74
NPAS3-210ENST00000551492 ANXA1P04083 346 aa25.91■■□□□ 1.74
NPAS3-210ENST00000551492 RTL1A6NKG5 1358 aa25.91■■□□□ 1.74
NPAS3-210ENST00000551492 VAMP4O75379 141 aa25.91■■□□□ 1.74
NPAS3-210ENST00000551492 DYNC1I1O14576 645 aa25.9■■□□□ 1.74
NPAS3-210ENST00000551492 ZNF853P0CG23 659 aa25.9■■□□□ 1.74
NPAS3-210ENST00000551492 SEC24BO95487 1268 aa25.9■■□□□ 1.74
NPAS3-210ENST00000551492 EIF2S2P20042 333 aaKnown RBP25.89■■□□□ 1.74
NPAS3-210ENST00000551492 C1orf141Q5JVX7 400 aa25.89■■□□□ 1.74
NPAS3-210ENST00000551492 CNPY4Q8N129 248 aa25.89■■□□□ 1.74
NPAS3-210ENST00000551492 C8orf37Q96NL8 207 aa25.89■■□□□ 1.74
NPAS3-210ENST00000551492 PLEKHO1Q53GL0 409 aaPredicted RBP25.89■■□□□ 1.73
NPAS3-210ENST00000551492 NGEFQ8N5V2 710 aa25.89■■□□□ 1.73
NPAS3-210ENST00000551492 CERKQ8TCT0 537 aa25.89■■□□□ 1.73
NPAS3-210ENST00000551492 IFT57Q9NWB7 429 aa25.89■■□□□ 1.73
NPAS3-210ENST00000551492 CYP27B1O15528 508 aa25.88■■□□□ 1.73
NPAS3-210ENST00000551492 PIP4K2AP48426 406 aaPredicted RBP25.88■■□□□ 1.73
NPAS3-210ENST00000551492 TSC1Q92574 1164 aa25.88■■□□□ 1.73
NPAS3-210ENST00000551492 MEGF6O75095 1541 aa25.88■■□□□ 1.73
NPAS3-210ENST00000551492 ATP2B3Q16720 1220 aa25.88■■□□□ 1.73
NPAS3-210ENST00000551492 PHRF1Q9P1Y6 1649 aaKnown RBP25.88■■□□□ 1.73
NPAS3-210ENST00000551492 LMOD3Q0VAK6 560 aa25.87■■□□□ 1.73
NPAS3-210ENST00000551492 BECN1Q14457 450 aa25.87■■□□□ 1.73
NPAS3-210ENST00000551492 TATP17735 454 aaPredicted RBP25.87■■□□□ 1.73
NPAS3-210ENST00000551492 CHL1O00533 1208 aa25.87■■□□□ 1.73
NPAS3-210ENST00000551492 NFATC2IPQ8NCF5 419 aa25.87■■□□□ 1.73
NPAS3-210ENST00000551492 HSPA1LP34931 641 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms