RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CD2BP2O95400 341 aaKnown RBP6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 CCDC173Q0VFZ6 552 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 RALBP1Q15311 655 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 TAF3Q5VWG9 929 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 TRIM67Q6ZTA4 783 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 GAS2L3Q86XJ1 694 aa6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 EIF3AQ14152 1382 aaKnown RBP6.69□□□□□ -1.34
LSM3P2-201ENST00000551246 TCOF1Q13428 1488 aaKnown RBP6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 GAPVD1Q14C86 1478 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 FYCO1Q9BQS8 1478 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 ARHGEF11O15085 1522 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 WNT7AO00755 349 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 GDF9O60383 454 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 MCM5P33992 734 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 NR1H3Q13133 447 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 RC3H1Q5TC82 1133 aaKnown RBP6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 BPHLQ86WA6 291 aaPredicted RBP6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 PDLIM2Q96JY6 352 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 TBC1D32Q96NH3 1257 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 MYBBP1AQ9BQG0 1328 aaKnown RBP6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 PARD3Q8TEW0 1356 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 KIF15Q9NS87 1388 aa6.68□□□□□ -1.34
LSM3P2-201ENST00000551246 BCORL1Q5H9F3 1711 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 SIAH2O43255 324 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 PTK2Q05397 1052 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 VAC14Q08AM6 782 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 CNGB1Q14028 1251 aaPredicted RBP6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 FAM50AQ14320 339 aaKnown RBP6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 ERFEQ4G0M1 354 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 CLEC17AQ6ZS10 378 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 TRMT44Q8IYL2 757 aaKnown RBP6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 ADAM32Q8TC27 787 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 ARHGAP9Q9BRR9 750 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 CHMP4BQ9H444 224 aaKnown RBP6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 CHMP5Q9NZZ3 219 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 NOL7Q9UMY1 257 aaKnown RBP6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 UHRF1BP1Q6BDS2 1440 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 KIAA1107Q9UPP5 1409 aa6.67□□□□□ -1.34
LSM3P2-201ENST00000551246 THOC2Q8NI27 1593 aaKnown RBP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 GCC2Q8IWJ2 1684 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 MAGEB6P1A0A0J9YX57 407 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 POM121CA8CG34 1229 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 HSP90AB1P08238 724 aaKnown RBP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 VARSP26640 1264 aaKnown RBP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 GTF2F1P35269 517 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 WASHC4Q2M389 1173 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 MRGPRX2Q96LB1 330 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 CARD14Q9BXL6 1004 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 ZHX1Q9UKY1 873 aaPredicted RBP6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 ZNF521Q96K83 1311 aa6.66□□□□□ -1.34
LSM3P2-201ENST00000551246 PCF11O94913 1555 aaKnown RBP6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 E9PCH4 1651 aa6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 CTTNBP2Q8WZ74 1663 aa6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 C20orf194Q5TEA3 1177 aa6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 EHBP1Q8NDI1 1231 aa6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 ADAMTS19Q8TE59 1207 aa6.65□□□□□ -1.34
LSM3P2-201ENST00000551246 IGF1RP08069 1367 aa6.65□□□□□ -1.35
LSM3P2-201ENST00000551246 FGD5Q6ZNL6 1462 aa6.65□□□□□ -1.35
LSM3P2-201ENST00000551246 CLASP1Q7Z460 1538 aa6.65□□□□□ -1.35
LSM3P2-201ENST00000551246 ZNF608Q9ULD9 1512 aaPredicted RBP6.65□□□□□ -1.35
LSM3P2-201ENST00000551246 PTMSP20962 102 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 MMP14P50281 582 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 PRR20EP86478 221 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 PRR20CP86479 221 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 PRR20DP86480 221 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 PRR20BP86481 221 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 PRR20AP86496 221 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 AGERQ15109 404 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 SKOR2Q2VWA4 1001 aaPredicted RBP6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 SASS6Q6UVJ0 657 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 TMC1Q8TDI8 760 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 ARXQ96QS3 562 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 TLL2Q9Y6L7 1015 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 MAPK8IP3Q9UPT6 1336 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 KDM5CP41229 1560 aa6.64□□□□□ -1.35
LSM3P2-201ENST00000551246 UQCRHLA0A096LP55 91 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 PLIN1O60240 522 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 UQCRHP07919 91 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 RBM25P49756 843 aaKnown RBP6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 ZNF445P59923 1031 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 ZBTB33Q86T24 672 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 NLRP13Q86W25 1043 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 MPNDQ8N594 471 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 FAM13BQ9NYF5 915 aa6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
LSM3P2-201ENST00000551246 TNFRSF10AO00220 468 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 FOXC1Q12948 553 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 SMC5Q8IY18 1101 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 MYRIPQ8NFW9 859 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 FAM174AQ8TBP5 190 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 SNX21Q969T3 373 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 TRIM44Q96DX7 344 aaPredicted RBP6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 CDK15Q96Q40 435 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 MPHOSPH9Q99550 1183 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 ALG2Q9H553 416 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 TOR4AQ9NXH8 423 aa6.62□□□□□ -1.35
LSM3P2-201ENST00000551246 MAP4K5Q9Y4K4 846 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms