RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-213ENST00000550831 IGHDP01880 384 aa11.7□□□□□ -0.54
TMEM116-213ENST00000550831 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-213ENST00000550831 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
TMEM116-213ENST00000550831 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-213ENST00000550831 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
TMEM116-213ENST00000550831 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
TMEM116-213ENST00000550831 LAS1LQ9Y4W2 734 aaKnown RBP11.7□□□□□ -0.54
TMEM116-213ENST00000550831 MCM10Q7L590 875 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 API5Q9BZZ5 524 aaKnown RBP11.69□□□□□ -0.54
TMEM116-213ENST00000550831 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
TMEM116-213ENST00000550831 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 TMEM57Q8N5G2 664 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
TMEM116-213ENST00000550831 CPDO75976 1380 aa11.68□□□□□ -0.54
TMEM116-213ENST00000550831 PDE4AP27815 886 aa11.68□□□□□ -0.54
TMEM116-213ENST00000550831 AMOTQ4VCS5 1084 aa11.68□□□□□ -0.54
TMEM116-213ENST00000550831 PTPRCP08575 1304 aa11.67□□□□□ -0.54
TMEM116-213ENST00000550831 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
TMEM116-213ENST00000550831 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
TMEM116-213ENST00000550831 VIRMAQ69YN4 1812 aaKnown RBP11.67□□□□□ -0.54
TMEM116-213ENST00000550831 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
TMEM116-213ENST00000550831 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
TMEM116-213ENST00000550831 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
TMEM116-213ENST00000550831 N4BP2Q86UW6 1770 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-213ENST00000550831 ZBTB7BO15156 539 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-213ENST00000550831 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
TMEM116-213ENST00000550831 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-213ENST00000550831 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
TMEM116-213ENST00000550831 IL17REQ8NFR9 667 aa11.66□□□□□ -0.54
TMEM116-213ENST00000550831 ERBB3P21860 1342 aa11.66□□□□□ -0.54
TMEM116-213ENST00000550831 HOXB7P09629 217 aa11.65□□□□□ -0.54
TMEM116-213ENST00000550831 AKAP4Q5JQC9 854 aa11.65□□□□□ -0.54
TMEM116-213ENST00000550831 INTS3Q68E01 1043 aaKnown RBP11.65□□□□□ -0.54
TMEM116-213ENST00000550831 SMC5Q8IY18 1101 aa11.65□□□□□ -0.54
TMEM116-213ENST00000550831 ANKRD24Q8TF21 1146 aa11.65□□□□□ -0.54
TMEM116-213ENST00000550831 C8orf37Q96NL8 207 aa11.65□□□□□ -0.54
TMEM116-213ENST00000550831 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
TMEM116-213ENST00000550831 SOS2Q07890 1332 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-213ENST00000550831 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.55
TMEM116-213ENST00000550831 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-213ENST00000550831 PLEKHO1Q53GL0 409 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-213ENST00000550831 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
TMEM116-213ENST00000550831 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-213ENST00000550831 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
TMEM116-213ENST00000550831 QTRT2Q9H974 415 aaKnown RBP11.64□□□□□ -0.55
TMEM116-213ENST00000550831 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
TMEM116-213ENST00000550831 LTV1Q96GA3 475 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-213ENST00000550831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM116-213ENST00000550831 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
TMEM116-213ENST00000550831 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-213ENST00000550831 NGLY1Q96IV0 654 aa11.62□□□□□ -0.55
TMEM116-213ENST00000550831 PKD1L3Q7Z443 1732 aa11.62□□□□□ -0.55
TMEM116-213ENST00000550831 C8orf34Q49A92 452 aa11.61□□□□□ -0.55
TMEM116-213ENST00000550831 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
TMEM116-213ENST00000550831 ABCA3Q99758 1704 aa11.61□□□□□ -0.55
TMEM116-213ENST00000550831 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
TMEM116-213ENST00000550831 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 DDX17Q92841 729 aaKnown RBP11.6□□□□□ -0.55
TMEM116-213ENST00000550831 PDZRN3Q9UPQ7 1066 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-213ENST00000550831 SCN11AQ9UI33 1791 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
TMEM116-213ENST00000550831 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-213ENST00000550831 RNMTO43148 476 aaKnown RBP11.59□□□□□ -0.55
TMEM116-213ENST00000550831 ADAMTS2O95450 1211 aa11.59□□□□□ -0.55
TMEM116-213ENST00000550831 ZNF530Q6P9A1 599 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-213ENST00000550831 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
TMEM116-213ENST00000550831 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
TMEM116-213ENST00000550831 MRC1P22897 1456 aa11.59□□□□□ -0.55
TMEM116-213ENST00000550831 ANP32AP39687 249 aaKnown RBP11.58□□□□□ -0.56
TMEM116-213ENST00000550831 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
TMEM116-213ENST00000550831 SKAP1Q86WV1 359 aa11.58□□□□□ -0.56
TMEM116-213ENST00000550831 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
TMEM116-213ENST00000550831 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
TMEM116-213ENST00000550831 TRPC5Q9UL62 973 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-213ENST00000550831 ATRNO75882 1429 aa11.58□□□□□ -0.56
TMEM116-213ENST00000550831 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
TMEM116-213ENST00000550831 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
TMEM116-213ENST00000550831 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
TMEM116-213ENST00000550831 NUCB1Q02818 461 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
TMEM116-213ENST00000550831 STK31Q9BXU1 1019 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 LGR6Q9HBX8 967 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 USP21Q9UK80 565 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 ATP10DQ9P241 1426 aa11.57□□□□□ -0.56
TMEM116-213ENST00000550831 RGS3P49796 1198 aa11.56□□□□□ -0.56
TMEM116-213ENST00000550831 FNBP4Q8N3X1 1017 aaPredicted RBP11.56□□□□□ -0.56
TMEM116-213ENST00000550831 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
TMEM116-213ENST00000550831 TEFQ10587 303 aa11.55□□□□□ -0.56
TMEM116-213ENST00000550831 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
TMEM116-213ENST00000550831 MEGF6O75095 1541 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms