RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 FOXO3O43524 673 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 VAMP4O75379 141 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 COG3Q96JB2 828 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 MST1RQ04912 1400 aa13.19□□□□□ -0.3
SMARCC2-208ENST00000550150 PTMSP20962 102 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 CASC1Q6TDU7 716 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 LRRC37A3O60309 1634 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 ST18O60284 1047 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 TPM2P07951 284 aa13.18□□□□□ -0.3
SMARCC2-208ENST00000550150 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 RABEP1Q15276 862 aa13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 NUCB2P80303 420 aa13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 CHMP4BQ9H444 224 aaKnown RBP13.17□□□□□ -0.3
SMARCC2-208ENST00000550150 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 FCHSD2O94868 740 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 NEK4P51957 841 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 DTNBO60941 627 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 IL13P35225 146 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 GNAI1P63096 354 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 LTN1O94822 1766 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
SMARCC2-208ENST00000550150 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 UQCRHLA0A096LP55 91 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 UQCRHP07919 91 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 SDSP20132 328 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
SMARCC2-208ENST00000550150 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.31
SMARCC2-208ENST00000550150 NECTIN2Q92692 538 aa13.15□□□□□ -0.31
SMARCC2-208ENST00000550150 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.31
SMARCC2-208ENST00000550150 TTC22Q5TAA0 569 aa13.14□□□□□ -0.31
SMARCC2-208ENST00000550150 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
SMARCC2-208ENST00000550150 IL16Q14005 1332 aa13.14□□□□□ -0.31
SMARCC2-208ENST00000550150 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
SMARCC2-208ENST00000550150 NLRP6P59044 892 aa13.14□□□□□ -0.31
SMARCC2-208ENST00000550150 ABTB2Q8N961 1025 aa13.14□□□□□ -0.31
SMARCC2-208ENST00000550150 GPT2Q8TD30 523 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 NFAT5O94916 1531 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 OFD1O75665 1012 aa13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
SMARCC2-208ENST00000550150 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 MCM10Q7L590 875 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 UPF3BQ9BZI7 483 aaKnown RBP13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 ZNF830Q96NB3 372 aaPredicted RBP13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 MEIS3Q99687 375 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
SMARCC2-208ENST00000550150 F6X3S4 739 aa13.11□□□□□ -0.31
SMARCC2-208ENST00000550150 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
SMARCC2-208ENST00000550150 PSME1Q06323 249 aa13.11□□□□□ -0.31
SMARCC2-208ENST00000550150 RGPD5Q99666 1765 aa13.1□□□□□ -0.31
SMARCC2-208ENST00000550150 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
SMARCC2-208ENST00000550150 TSC1Q92574 1164 aa13.1□□□□□ -0.31
SMARCC2-208ENST00000550150 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
SMARCC2-208ENST00000550150 REC8O95072 547 aa13.09□□□□□ -0.31
SMARCC2-208ENST00000550150 KIF1AQ12756 1690 aa13.09□□□□□ -0.31
SMARCC2-208ENST00000550150 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.31
SMARCC2-208ENST00000550150 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 DCTPP1Q9H773 170 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 PXDNQ92626 1479 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 MAP4K4O95819 1239 aaPredicted RBP13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 ZNF445P59923 1031 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 DCCP43146 1447 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
SMARCC2-208ENST00000550150 ERC2O15083 957 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 ATF3P18847 181 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 C17orf53Q8N3J3 647 aaPredicted RBP13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 KRT28Q7Z3Y7 464 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 CABLES1Q8TDN4 633 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
SMARCC2-208ENST00000550150 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms