RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 IL17REQ8NFR9 667 aa19.72■□□□□ 0.75
GPN3-206ENST00000549963 ATG3Q9NT62 314 aa19.72■□□□□ 0.75
GPN3-206ENST00000549963 LMOD3Q0VAK6 560 aa19.71■□□□□ 0.75
GPN3-206ENST00000549963 CCDC146Q8IYE0 955 aa19.71■□□□□ 0.75
GPN3-206ENST00000549963 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
GPN3-206ENST00000549963 NUP188Q5SRE5 1749 aa19.71■□□□□ 0.75
GPN3-206ENST00000549963 RIPK4P57078 832 aa19.7■□□□□ 0.74
GPN3-206ENST00000549963 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
GPN3-206ENST00000549963 DLG5Q8TDM6 1919 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 ATP6V1AP38606 617 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 SIK1P57059 783 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 R3HDM1Q15032 1099 aaKnown RBP19.69■□□□□ 0.74
GPN3-206ENST00000549963 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 TTC5Q8N0Z6 440 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 PNISRQ8TF01 805 aaKnown RBP19.69■□□□□ 0.74
GPN3-206ENST00000549963 LRRC4BQ9NT99 713 aa19.69■□□□□ 0.74
GPN3-206ENST00000549963 TMPOP42166 694 aaKnown RBP19.68■□□□□ 0.74
GPN3-206ENST00000549963 MCM10Q7L590 875 aa19.68■□□□□ 0.74
GPN3-206ENST00000549963 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
GPN3-206ENST00000549963 KCNQ4P56696 695 aa19.67■□□□□ 0.74
GPN3-206ENST00000549963 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
GPN3-206ENST00000549963 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
GPN3-206ENST00000549963 CEMIPQ8WUJ3 1361 aa19.67■□□□□ 0.74
GPN3-206ENST00000549963 PSDA5PKW4 1024 aaPredicted RBP19.66■□□□□ 0.74
GPN3-206ENST00000549963 BTBD11A6QL63 1104 aa19.66■□□□□ 0.74
GPN3-206ENST00000549963 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
GPN3-206ENST00000549963 DCTN1Q14203 1278 aa19.65■□□□□ 0.74
GPN3-206ENST00000549963 TAF7Q15545 349 aaPredicted RBP19.65■□□□□ 0.74
GPN3-206ENST00000549963 MRC1P22897 1456 aa19.65■□□□□ 0.74
GPN3-206ENST00000549963 SLC39A6Q13433 755 aa19.64■□□□□ 0.73
GPN3-206ENST00000549963 TFCP2L1Q9NZI6 479 aa19.64■□□□□ 0.73
GPN3-206ENST00000549963 ZNF790Q6PG37 636 aa19.63■□□□□ 0.73
GPN3-206ENST00000549963 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
GPN3-206ENST00000549963 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
GPN3-206ENST00000549963 FAM9BQ8IZU0 186 aa19.62■□□□□ 0.73
GPN3-206ENST00000549963 AK7Q96M32 723 aa19.62■□□□□ 0.73
GPN3-206ENST00000549963 ANO8Q9HCE9 1232 aaPredicted RBP19.62■□□□□ 0.73
GPN3-206ENST00000549963 TAF1LQ8IZX4 1826 aa19.61■□□□□ 0.73
GPN3-206ENST00000549963 APAF1O14727 1248 aa19.61■□□□□ 0.73
GPN3-206ENST00000549963 AKT1S1Q96B36 256 aa19.61■□□□□ 0.73
GPN3-206ENST00000549963 C5P01031 1676 aa19.61■□□□□ 0.73
GPN3-206ENST00000549963 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
GPN3-206ENST00000549963 ZNF831Q5JPB2 1677 aa19.6■□□□□ 0.73
GPN3-206ENST00000549963 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
GPN3-206ENST00000549963 FLAD1Q8NFF5 587 aa19.6■□□□□ 0.73
GPN3-206ENST00000549963 FMNL2Q96PY5 1086 aa19.6■□□□□ 0.73
GPN3-206ENST00000549963 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
GPN3-206ENST00000549963 CALD1Q05682 793 aaKnown RBP19.58■□□□□ 0.72
GPN3-206ENST00000549963 ITPK1Q13572 414 aa19.58■□□□□ 0.72
GPN3-206ENST00000549963 ZNF827Q17R98 1081 aa19.58■□□□□ 0.72
GPN3-206ENST00000549963 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.72
GPN3-206ENST00000549963 PAPPAQ13219 1627 aa19.58■□□□□ 0.72
GPN3-206ENST00000549963 MSH5O43196 834 aa19.57■□□□□ 0.72
GPN3-206ENST00000549963 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
GPN3-206ENST00000549963 SLC4A9Q96Q91 983 aa19.57■□□□□ 0.72
GPN3-206ENST00000549963 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
GPN3-206ENST00000549963 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
GPN3-206ENST00000549963 STARD3NLO95772 234 aa19.56■□□□□ 0.72
GPN3-206ENST00000549963 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
GPN3-206ENST00000549963 SLC16A10Q8TF71 515 aa19.55■□□□□ 0.72
GPN3-206ENST00000549963 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
GPN3-206ENST00000549963 MIS18AQ9NYP9 233 aa19.55■□□□□ 0.72
GPN3-206ENST00000549963 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
GPN3-206ENST00000549963 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
GPN3-206ENST00000549963 GNPATO15228 680 aa19.54■□□□□ 0.72
GPN3-206ENST00000549963 TSPYL4Q9UJ04 414 aa19.54■□□□□ 0.72
GPN3-206ENST00000549963 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
GPN3-206ENST00000549963 UBR2Q8IWV8 1755 aa19.54■□□□□ 0.72
GPN3-206ENST00000549963 HEG1Q9ULI3 1381 aa19.54■□□□□ 0.72
GPN3-206ENST00000549963 QSER1Q2KHR3 1735 aa19.54■□□□□ 0.72
GPN3-206ENST00000549963 CNTNAP4Q9C0A0 1308 aa19.53■□□□□ 0.72
GPN3-206ENST00000549963 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
GPN3-206ENST00000549963 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
GPN3-206ENST00000549963 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
GPN3-206ENST00000549963 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
GPN3-206ENST00000549963 KCPQ6ZWJ8 1503 aa19.52■□□□□ 0.72
GPN3-206ENST00000549963 KCNQ3O43525 872 aa19.52■□□□□ 0.72
GPN3-206ENST00000549963 SSFA2P28290 1259 aa19.52■□□□□ 0.72
GPN3-206ENST00000549963 CRKLP46109 303 aaKnown RBP19.52■□□□□ 0.72
GPN3-206ENST00000549963 TRAPPC3LQ5T215 181 aa19.52■□□□□ 0.72
GPN3-206ENST00000549963 MIER1Q8N108 512 aa19.52■□□□□ 0.72
GPN3-206ENST00000549963 SPON1Q9HCB6 807 aa19.52■□□□□ 0.72
GPN3-206ENST00000549963 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
GPN3-206ENST00000549963 RPS6KA4O75676 772 aa19.51■□□□□ 0.71
GPN3-206ENST00000549963 PHF14O94880 888 aa19.51■□□□□ 0.71
GPN3-206ENST00000549963 CYP19A1P11511 503 aaPredicted RBP19.51■□□□□ 0.71
GPN3-206ENST00000549963 CCDC27Q2M243 656 aa19.51■□□□□ 0.71
GPN3-206ENST00000549963 NPM2Q86SE8 214 aaKnown RBP19.51■□□□□ 0.71
GPN3-206ENST00000549963 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
GPN3-206ENST00000549963 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
GPN3-206ENST00000549963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
GPN3-206ENST00000549963 ADRA2BP18089 450 aa19.5■□□□□ 0.71
GPN3-206ENST00000549963 MTFR1LQ9H019 292 aa19.5■□□□□ 0.71
GPN3-206ENST00000549963 TJP1Q07157 1748 aa19.49■□□□□ 0.71
GPN3-206ENST00000549963 GNAI1P63096 354 aa19.49■□□□□ 0.71
GPN3-206ENST00000549963 COL23A1Q86Y22 540 aaPredicted RBP19.49■□□□□ 0.71
GPN3-206ENST00000549963 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
GPN3-206ENST00000549963 CICQ96RK0 1608 aaPredicted RBP19.49■□□□□ 0.71
GPN3-206ENST00000549963 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms