RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 ZNF777Q9ULD5 760 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-207ENST00000549400 IFT172Q9UG01 1749 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 IQGAP1P46940 1657 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 HECW2Q9P2P5 1572 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 INSRP06213 1382 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 ZC3H4Q9UPT8 1303 aaKnown RBP5.07□□□□□ -1.6
PTPRB-207ENST00000549400 ANP32CO43423 234 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 ACTN4O43707 911 aaKnown RBP5.07□□□□□ -1.6
PTPRB-207ENST00000549400 NR1I2O75469 434 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 AVPP01185 164 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 CTC1Q2NKJ3 1217 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 ANP32BQ92688 251 aaKnown RBP5.07□□□□□ -1.6
PTPRB-207ENST00000549400 DNAJC2Q99543 621 aaKnown RBP5.07□□□□□ -1.6
PTPRB-207ENST00000549400 CLTCL1P53675 1640 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 MAP3K4Q9Y6R4 1608 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 REREQ9P2R6 1566 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 ADGRB3O60242 1522 aa5.07□□□□□ -1.6
PTPRB-207ENST00000549400 MYO3AQ8NEV4 1616 aa5.06□□□□□ -1.6
PTPRB-207ENST00000549400 TTC24A2A3L6 582 aaPredicted RBP5.06□□□□□ -1.6
PTPRB-207ENST00000549400 TERTO14746 1132 aaKnown RBP5.06□□□□□ -1.6
PTPRB-207ENST00000549400 CD2BP2O95400 341 aaKnown RBP5.06□□□□□ -1.6
PTPRB-207ENST00000549400 GTF2E1P29083 439 aaPredicted RBP5.06□□□□□ -1.6
PTPRB-207ENST00000549400 SGSM3Q96HU1 749 aa5.06□□□□□ -1.6
PTPRB-207ENST00000549400 PRKRIP1Q9H875 184 aaPredicted RBP5.06□□□□□ -1.6
PTPRB-207ENST00000549400 AMOTL2Q9Y2J4 779 aa5.06□□□□□ -1.6
PTPRB-207ENST00000549400 ARHGAP31Q2M1Z3 1444 aa5.06□□□□□ -1.6
PTPRB-207ENST00000549400 ZC3H13Q5T200 1668 aaKnown RBP5.05□□□□□ -1.6
PTPRB-207ENST00000549400 PPRC1Q5VV67 1664 aaKnown RBP5.05□□□□□ -1.6
PTPRB-207ENST00000549400 PIK3C2BO00750 1634 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 ABCA6Q8N139 1617 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 SPAG9O60271 1321 aaKnown RBP5.05□□□□□ -1.6
PTPRB-207ENST00000549400 CENPJQ9HC77 1338 aaPredicted RBP5.05□□□□□ -1.6
PTPRB-207ENST00000549400 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 BRD1O95696 1058 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 CFHP08603 1231 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 DNAJB2P25686 324 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 HSP90AB4PQ58FF6 505 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 FAM43AQ8N2R8 423 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 NPDC1Q9NQX5 325 aaPredicted RBP5.05□□□□□ -1.6
PTPRB-207ENST00000549400 TOR4AQ9NXH8 423 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 RICTORQ6R327 1708 aa5.05□□□□□ -1.6
PTPRB-207ENST00000549400 SBNO2Q9Y2G9 1366 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 SYNMO15061 1565 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 DIP2CQ9Y2E4 1556 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 SETBP1Q9Y6X0 1596 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 WASHC2CQ9Y4E1 1318 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 UNCXA6NJT0 531 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 HSP90AA1P07900 732 aaKnown RBP5.04□□□□□ -1.6
PTPRB-207ENST00000549400 SMCPP49901 116 aaPredicted RBP5.04□□□□□ -1.6
PTPRB-207ENST00000549400 AXDND1Q5T1B0 1012 aaPredicted RBP5.04□□□□□ -1.6
PTPRB-207ENST00000549400 WWC1Q8IX03 1113 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 TMTC2Q8N394 836 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 GPATCH11Q8N954 259 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 NOS1P29475 1434 aa5.04□□□□□ -1.6
PTPRB-207ENST00000549400 LRPPRCP42704 1394 aaKnown RBP5.04□□□□□ -1.6
PTPRB-207ENST00000549400 ABCC3O15438 1527 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 SNRPBP14678 240 aaKnown RBP5.03□□□□□ -1.6
PTPRB-207ENST00000549400 RPIAP49247 311 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 SCUBE3Q8IX30 993 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 RBM46Q8TBY0 533 aaKnown RBP5.03□□□□□ -1.6
PTPRB-207ENST00000549400 SPATA32Q96LK8 384 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 TESK2Q96S53 571 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 SPSB2Q99619 263 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 HIRIP3Q9BW71 556 aaPredicted RBP5.03□□□□□ -1.6
PTPRB-207ENST00000549400 SLC52A1Q9NWF4 448 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 PRDM4Q9UKN5 801 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 CD109Q6YHK3 1445 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 PARD3Q8TEW0 1356 aa5.03□□□□□ -1.6
PTPRB-207ENST00000549400 SCAF11Q99590 1463 aaKnown RBP5.02□□□□□ -1.61
PTPRB-207ENST00000549400 TRAK2O60296 914 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 FAM193AP78312 1265 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 AFAP1Q8N556 730 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 SLC16A10Q8TF71 515 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 ZNF622Q969S3 477 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPRB-207ENST00000549400 SENP2Q9HC62 589 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 ATP13A2Q9NQ11 1180 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 NPATQ14207 1427 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 ADGRB1O14514 1584 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 DIP2BQ9P265 1576 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 NPC1L1Q9UHC9 1359 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 AGLP35573 1532 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 MROH2AA6NES4 1674 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 MYOM1P52179 1685 aa5.02□□□□□ -1.61
PTPRB-207ENST00000549400 CAMSAP1Q5T5Y3 1602 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 ZBED9Q6R2W3 1325 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 ZFYVE9O95405 1425 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 A6NJR5 290 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 ZBTB24O43167 697 aaPredicted RBP5.01□□□□□ -1.61
PTPRB-207ENST00000549400 MMP14P50281 582 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 PUS10Q3MIT2 529 aaKnown RBP5.01□□□□□ -1.61
PTPRB-207ENST00000549400 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 NME8Q8N427 588 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 FBXO41Q8TF61 875 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 SIRT1Q96EB6 747 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 CARD11Q9BXL7 1154 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 TMEM134Q9H6X4 195 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 SUGT1Q9Y2Z0 365 aa5.01□□□□□ -1.61
PTPRB-207ENST00000549400 LAS1LQ9Y4W2 734 aaKnown RBP5.01□□□□□ -1.61
PTPRB-207ENST00000549400 BRD4O60885 1362 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms