RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 PTPRMP28827 1452 aa8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 WIPF1O43516 503 aa8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 WFS1O76024 890 aa8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 CTHP32929 405 aa8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 SENP2Q9HC62 589 aa8.92□□□□□ -0.98
EFCAB2-215ENST00000549220 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 RNF17Q9BXT8 1623 aaKnown RBP8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 TERTO14746 1132 aaKnown RBP8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 KIF3BO15066 747 aa8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 NR3C2P08235 984 aa8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 NNTQ13423 1086 aa8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 SH3BP5LQ7L8J4 393 aa8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 ZC3H13Q5T200 1668 aaKnown RBP8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 CAMSAP1Q5T5Y3 1602 aa8.91□□□□□ -0.98
EFCAB2-215ENST00000549220 KIF15Q9NS87 1388 aa8.9□□□□□ -0.98
EFCAB2-215ENST00000549220 POLR3EQ9NVU0 708 aa8.9□□□□□ -0.98
EFCAB2-215ENST00000549220 WASF2Q9Y6W5 498 aa8.9□□□□□ -0.98
EFCAB2-215ENST00000549220 DHX29Q7Z478 1369 aaKnown RBP8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 ANKRD30AQ9BXX3 1397 aa8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 ADH1CP00326 375 aa8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 CEBPAP49715 358 aaPredicted RBP8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 CTDSPL2Q05D32 466 aa8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 FAM117AQ9C073 453 aa8.89□□□□□ -0.99
EFCAB2-215ENST00000549220 PTPRKQ15262 1439 aa8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 MROH1Q8NDA8 1641 aa8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
EFCAB2-215ENST00000549220 MYO5BQ9ULV0 1848 aa8.87□□□□□ -0.99
EFCAB2-215ENST00000549220 KDM5DQ9BY66 1539 aa8.87□□□□□ -0.99
EFCAB2-215ENST00000549220 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
EFCAB2-215ENST00000549220 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
EFCAB2-215ENST00000549220 OCSTAMPQ9BR26 566 aa8.87□□□□□ -0.99
EFCAB2-215ENST00000549220 ADGRL2O95490 1459 aa8.87□□□□□ -0.99
EFCAB2-215ENST00000549220 SKIV2LQ15477 1246 aaKnown RBP8.86□□□□□ -0.99
EFCAB2-215ENST00000549220 SH3D19Q5HYK7 790 aa8.86□□□□□ -0.99
EFCAB2-215ENST00000549220 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
EFCAB2-215ENST00000549220 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
EFCAB2-215ENST00000549220 MYO3AQ8NEV4 1616 aa8.86□□□□□ -0.99
EFCAB2-215ENST00000549220 NCOA1Q15788 1441 aa8.86□□□□□ -0.99
EFCAB2-215ENST00000549220 NUTM2BA6NNL0 878 aaPredicted RBP8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 NUTM2EB1AL46 878 aaPredicted RBP8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 NUTM2DQ5VT03 806 aaPredicted RBP8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 NUTM2AQ8IVF1 878 aaPredicted RBP8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 PRDM15P57071 1507 aaPredicted RBP8.85□□□□□ -0.99
EFCAB2-215ENST00000549220 WASHC2CQ9Y4E1 1318 aa8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 UNC13BO14795 1591 aa8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 WDR4P57081 412 aaKnown RBP8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 BPHLQ86WA6 291 aaPredicted RBP8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 LRRN4Q8WUT4 740 aa8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 ITPKCQ96DU7 683 aa8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 CNTLNQ9NXG0 1405 aa8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 ABCC3O15438 1527 aa8.84□□□□□ -0.99
EFCAB2-215ENST00000549220 ANKRD50Q9ULJ7 1429 aa8.83□□□□□ -1
EFCAB2-215ENST00000549220 NR5A1Q13285 461 aa8.83□□□□□ -1
EFCAB2-215ENST00000549220 MAP4K5Q9Y4K4 846 aa8.83□□□□□ -1
EFCAB2-215ENST00000549220 E9PCH4 1651 aa8.83□□□□□ -1
EFCAB2-215ENST00000549220 TET3O43151 1660 aa8.83□□□□□ -1
EFCAB2-215ENST00000549220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
EFCAB2-215ENST00000549220 ZNF142P52746 1687 aaPredicted RBP8.82□□□□□ -1
EFCAB2-215ENST00000549220 TSC1Q92574 1164 aa8.82□□□□□ -1
EFCAB2-215ENST00000549220 NXF1Q9UBU9 619 aaKnown RBP8.82□□□□□ -1
EFCAB2-215ENST00000549220 IQGAP3Q86VI3 1631 aa8.82□□□□□ -1
EFCAB2-215ENST00000549220 ZMYM3Q14202 1370 aa8.82□□□□□ -1
EFCAB2-215ENST00000549220 KANK1Q14678 1352 aa8.82□□□□□ -1
EFCAB2-215ENST00000549220 POLR1AO95602 1720 aaPredicted RBP8.81□□□□□ -1
EFCAB2-215ENST00000549220 SPHKAPQ2M3C7 1700 aa8.81□□□□□ -1
EFCAB2-215ENST00000549220 HELBQ8NG08 1087 aaPredicted RBP8.81□□□□□ -1
EFCAB2-215ENST00000549220 FAM135AQ9P2D6 1515 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 ZIC2O95409 532 aaPredicted RBP8.8□□□□□ -1
EFCAB2-215ENST00000549220 HSPA2P54652 639 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 ERFEQ4G0M1 354 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 ARMC2Q8NEN0 867 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 ROCK1Q13464 1354 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 LMTK3Q96Q04 1460 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 STRCQ7RTU9 1775 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 ERBB4Q15303 1308 aa8.8□□□□□ -1
EFCAB2-215ENST00000549220 CEP170BQ9Y4F5 1589 aaPredicted RBP8.79□□□□□ -1
EFCAB2-215ENST00000549220 SOBPA7XYQ1 873 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 H3BM21 787 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 EPS8L1Q8TE68 723 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
EFCAB2-215ENST00000549220 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
EFCAB2-215ENST00000549220 KIF1BO60333 1816 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 PIK3C2BO00750 1634 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 EFCAB6Q5THR3 1501 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
EFCAB2-215ENST00000549220 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms