RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PROM2Q8N271 834 aa12.69□□□□□ -0.38
RAB5B-205ENST00000549034 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
RAB5B-205ENST00000549034 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
RAB5B-205ENST00000549034 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
RAB5B-205ENST00000549034 BTAF1O14981 1849 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 RIPK4P57078 832 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 SMARCC1Q92922 1105 aaPredicted RBP12.68□□□□□ -0.38
RAB5B-205ENST00000549034 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
RAB5B-205ENST00000549034 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
RAB5B-205ENST00000549034 KCNQ4P56696 695 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 TEFQ10587 303 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 MCM10Q7L590 875 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
RAB5B-205ENST00000549034 EP400Q96L91 3159 aa12.67□□□□□ -0.38
RAB5B-205ENST00000549034 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-205ENST00000549034 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
RAB5B-205ENST00000549034 MIER1Q8N108 512 aa12.66□□□□□ -0.38
RAB5B-205ENST00000549034 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
RAB5B-205ENST00000549034 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
RAB5B-205ENST00000549034 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
RAB5B-205ENST00000549034 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
RAB5B-205ENST00000549034 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
RAB5B-205ENST00000549034 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
RAB5B-205ENST00000549034 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-205ENST00000549034 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
RAB5B-205ENST00000549034 APAF1O14727 1248 aa12.64□□□□□ -0.39
RAB5B-205ENST00000549034 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
RAB5B-205ENST00000549034 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
RAB5B-205ENST00000549034 BTBD11A6QL63 1104 aa12.63□□□□□ -0.39
RAB5B-205ENST00000549034 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
RAB5B-205ENST00000549034 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
RAB5B-205ENST00000549034 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
RAB5B-205ENST00000549034 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-205ENST00000549034 PALLDQ8WX93 1383 aa12.63□□□□□ -0.39
RAB5B-205ENST00000549034 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
RAB5B-205ENST00000549034 SIK1P57059 783 aa12.62□□□□□ -0.39
RAB5B-205ENST00000549034 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
RAB5B-205ENST00000549034 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-205ENST00000549034 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
RAB5B-205ENST00000549034 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
RAB5B-205ENST00000549034 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
RAB5B-205ENST00000549034 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
RAB5B-205ENST00000549034 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
RAB5B-205ENST00000549034 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
RAB5B-205ENST00000549034 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
RAB5B-205ENST00000549034 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
RAB5B-205ENST00000549034 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
RAB5B-205ENST00000549034 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
RAB5B-205ENST00000549034 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-205ENST00000549034 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
RAB5B-205ENST00000549034 KCNQ3O43525 872 aa12.59□□□□□ -0.39
RAB5B-205ENST00000549034 SLC15A2Q16348 729 aa12.59□□□□□ -0.39
RAB5B-205ENST00000549034 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
RAB5B-205ENST00000549034 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
RAB5B-205ENST00000549034 LY75O60449 1722 aa12.59□□□□□ -0.39
RAB5B-205ENST00000549034 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.39
RAB5B-205ENST00000549034 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.39
RAB5B-205ENST00000549034 ITPK1Q13572 414 aa12.58□□□□□ -0.4
RAB5B-205ENST00000549034 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
RAB5B-205ENST00000549034 TFCP2L1Q9NZI6 479 aa12.58□□□□□ -0.4
RAB5B-205ENST00000549034 RREB1Q92766 1687 aa12.57□□□□□ -0.4
RAB5B-205ENST00000549034 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
RAB5B-205ENST00000549034 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
RAB5B-205ENST00000549034 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
RAB5B-205ENST00000549034 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
RAB5B-205ENST00000549034 ZNF827Q17R98 1081 aa12.56□□□□□ -0.4
RAB5B-205ENST00000549034 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
RAB5B-205ENST00000549034 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
RAB5B-205ENST00000549034 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
RAB5B-205ENST00000549034 AK7Q96M32 723 aa12.56□□□□□ -0.4
RAB5B-205ENST00000549034 FMNL2Q96PY5 1086 aa12.56□□□□□ -0.4
RAB5B-205ENST00000549034 MRC1P22897 1456 aa12.55□□□□□ -0.4
RAB5B-205ENST00000549034 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
RAB5B-205ENST00000549034 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
RAB5B-205ENST00000549034 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
RAB5B-205ENST00000549034 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
RAB5B-205ENST00000549034 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
RAB5B-205ENST00000549034 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
RAB5B-205ENST00000549034 CHL1O00533 1208 aa12.53□□□□□ -0.4
RAB5B-205ENST00000549034 PHF14O94880 888 aa12.53□□□□□ -0.4
RAB5B-205ENST00000549034 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
RAB5B-205ENST00000549034 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
RAB5B-205ENST00000549034 RC3H1Q5TC82 1133 aaKnown RBP12.53□□□□□ -0.4
RAB5B-205ENST00000549034 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
RAB5B-205ENST00000549034 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
RAB5B-205ENST00000549034 BABAM1Q9NWV8 329 aa12.53□□□□□ -0.4
RAB5B-205ENST00000549034 GNPATO15228 680 aa12.52□□□□□ -0.41
RAB5B-205ENST00000549034 STARD3NLO95772 234 aa12.52□□□□□ -0.41
RAB5B-205ENST00000549034 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-205ENST00000549034 CRKLP46109 303 aaKnown RBP12.52□□□□□ -0.41
RAB5B-205ENST00000549034 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.41
RAB5B-205ENST00000549034 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
RAB5B-205ENST00000549034 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms