RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
USP15-208ENST00000548524 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
USP15-208ENST00000548524 ZBTB7AO95365 584 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP15-208ENST00000548524 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 PIGBQ92521 554 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
USP15-208ENST00000548524 DOT1LQ8TEK3 1739 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 HMOX1P09601 288 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
USP15-208ENST00000548524 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
USP15-208ENST00000548524 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 BTAF1O14981 1849 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 LRP5O75197 1615 aa12.8□□□□□ -0.36
USP15-208ENST00000548524 U2SURPO15042 1029 aaKnown RBP12.79□□□□□ -0.36
USP15-208ENST00000548524 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
USP15-208ENST00000548524 KDRP35968 1356 aa12.79□□□□□ -0.36
USP15-208ENST00000548524 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
USP15-208ENST00000548524 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
USP15-208ENST00000548524 CABP4P57796 275 aa12.78□□□□□ -0.36
USP15-208ENST00000548524 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
USP15-208ENST00000548524 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
USP15-208ENST00000548524 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
USP15-208ENST00000548524 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
USP15-208ENST00000548524 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
USP15-208ENST00000548524 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
USP15-208ENST00000548524 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
USP15-208ENST00000548524 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
USP15-208ENST00000548524 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
USP15-208ENST00000548524 SIK1P57059 783 aa12.75□□□□□ -0.37
USP15-208ENST00000548524 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
USP15-208ENST00000548524 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
USP15-208ENST00000548524 PAPPAQ13219 1627 aa12.74□□□□□ -0.37
USP15-208ENST00000548524 PNPLA7Q6ZV29 1317 aa12.74□□□□□ -0.37
USP15-208ENST00000548524 POTEHQ6S545 545 aa12.74□□□□□ -0.37
USP15-208ENST00000548524 SLC16A10Q8TF71 515 aa12.74□□□□□ -0.37
USP15-208ENST00000548524 AK7Q96M32 723 aa12.74□□□□□ -0.37
USP15-208ENST00000548524 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
USP15-208ENST00000548524 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
USP15-208ENST00000548524 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
USP15-208ENST00000548524 PTGER2P43116 358 aa12.73□□□□□ -0.37
USP15-208ENST00000548524 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
USP15-208ENST00000548524 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
USP15-208ENST00000548524 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
USP15-208ENST00000548524 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
USP15-208ENST00000548524 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
USP15-208ENST00000548524 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
USP15-208ENST00000548524 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP15-208ENST00000548524 DDX10Q13206 875 aaKnown RBP12.72□□□□□ -0.37
USP15-208ENST00000548524 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
USP15-208ENST00000548524 FLAD1Q8NFF5 587 aa12.72□□□□□ -0.37
USP15-208ENST00000548524 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
USP15-208ENST00000548524 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.37
USP15-208ENST00000548524 POLD1P28340 1107 aa12.71□□□□□ -0.37
USP15-208ENST00000548524 COL23A1Q86Y22 540 aaPredicted RBP12.71□□□□□ -0.37
USP15-208ENST00000548524 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
USP15-208ENST00000548524 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.37
USP15-208ENST00000548524 ARXQ96QS3 562 aa12.71□□□□□ -0.37
USP15-208ENST00000548524 LGR6Q9HBX8 967 aa12.71□□□□□ -0.37
USP15-208ENST00000548524 PHF14O94880 888 aa12.7□□□□□ -0.38
USP15-208ENST00000548524 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
USP15-208ENST00000548524 ITPK1Q13572 414 aa12.7□□□□□ -0.38
USP15-208ENST00000548524 LY75O60449 1722 aa12.7□□□□□ -0.38
USP15-208ENST00000548524 PTCD1O75127 700 aaKnown RBP12.69□□□□□ -0.38
USP15-208ENST00000548524 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
USP15-208ENST00000548524 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
USP15-208ENST00000548524 SLC52A2Q9HAB3 445 aa12.69□□□□□ -0.38
USP15-208ENST00000548524 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
USP15-208ENST00000548524 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.68□□□□□ -0.38
USP15-208ENST00000548524 GNPATO15228 680 aa12.68□□□□□ -0.38
USP15-208ENST00000548524 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
USP15-208ENST00000548524 FHDC1Q9C0D6 1143 aaPredicted RBP12.68□□□□□ -0.38
USP15-208ENST00000548524 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
USP15-208ENST00000548524 SSFA2P28290 1259 aa12.67□□□□□ -0.38
USP15-208ENST00000548524 RALBP1Q15311 655 aa12.67□□□□□ -0.38
USP15-208ENST00000548524 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
USP15-208ENST00000548524 SLC4A9Q96Q91 983 aa12.67□□□□□ -0.38
USP15-208ENST00000548524 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
USP15-208ENST00000548524 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
USP15-208ENST00000548524 FCHSD2O94868 740 aa12.66□□□□□ -0.38
USP15-208ENST00000548524 NEFMP07197 916 aa12.66□□□□□ -0.38
USP15-208ENST00000548524 TEFQ10587 303 aa12.66□□□□□ -0.38
USP15-208ENST00000548524 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
USP15-208ENST00000548524 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
USP15-208ENST00000548524 ITGB4P16144 1822 aa12.66□□□□□ -0.38
USP15-208ENST00000548524 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
USP15-208ENST00000548524 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
USP15-208ENST00000548524 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
USP15-208ENST00000548524 SYT17Q9BSW7 474 aa12.65□□□□□ -0.38
USP15-208ENST00000548524 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
USP15-208ENST00000548524 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
USP15-208ENST00000548524 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
USP15-208ENST00000548524 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
USP15-208ENST00000548524 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
USP15-208ENST00000548524 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms