RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
KRT18-205ENST00000548496 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
KRT18-205ENST00000548496 SLC39A6Q13433 755 aa15.99■□□□□ 0.15
KRT18-205ENST00000548496 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
KRT18-205ENST00000548496 SLC52A2Q9HAB3 445 aa15.99■□□□□ 0.15
KRT18-205ENST00000548496 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
KRT18-205ENST00000548496 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
KRT18-205ENST00000548496 PLSCR1O15162 318 aa15.98■□□□□ 0.15
KRT18-205ENST00000548496 CCER2I3L3R5 266 aa15.97■□□□□ 0.15
KRT18-205ENST00000548496 MIS18AQ9NYP9 233 aa15.97■□□□□ 0.15
KRT18-205ENST00000548496 TEFQ10587 303 aa15.96■□□□□ 0.15
KRT18-205ENST00000548496 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
KRT18-205ENST00000548496 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.15
KRT18-205ENST00000548496 KCNQ3O43525 872 aa15.95■□□□□ 0.14
KRT18-205ENST00000548496 PTCD1O75127 700 aaKnown RBP15.95■□□□□ 0.14
KRT18-205ENST00000548496 TRIM35Q9UPQ4 493 aa15.95■□□□□ 0.14
KRT18-205ENST00000548496 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
KRT18-205ENST00000548496 ADAMTS7Q9UKP4 1686 aa15.95■□□□□ 0.14
KRT18-205ENST00000548496 HTATSF1O43719 755 aaKnown RBP15.94■□□□□ 0.14
KRT18-205ENST00000548496 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
KRT18-205ENST00000548496 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
KRT18-205ENST00000548496 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
KRT18-205ENST00000548496 LY75O60449 1722 aa15.93■□□□□ 0.14
KRT18-205ENST00000548496 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
KRT18-205ENST00000548496 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
KRT18-205ENST00000548496 BTBD11A6QL63 1104 aa15.92■□□□□ 0.14
KRT18-205ENST00000548496 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
KRT18-205ENST00000548496 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
KRT18-205ENST00000548496 RREB1Q92766 1687 aa15.92■□□□□ 0.14
KRT18-205ENST00000548496 LOC102724428A0A0B4J2F2 783 aa15.91■□□□□ 0.14
KRT18-205ENST00000548496 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
KRT18-205ENST00000548496 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
KRT18-205ENST00000548496 SIK1P57059 783 aa15.91■□□□□ 0.14
KRT18-205ENST00000548496 MRC1P22897 1456 aa15.91■□□□□ 0.14
KRT18-205ENST00000548496 ITPK1Q13572 414 aa15.9■□□□□ 0.14
KRT18-205ENST00000548496 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
KRT18-205ENST00000548496 SMIM5Q71RC9 77 aa15.9■□□□□ 0.14
KRT18-205ENST00000548496 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
KRT18-205ENST00000548496 RGPD3A6NKT7 1758 aaPredicted RBP15.89■□□□□ 0.13
KRT18-205ENST00000548496 RGPD4Q7Z3J3 1758 aa15.89■□□□□ 0.13
KRT18-205ENST00000548496 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
KRT18-205ENST00000548496 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
KRT18-205ENST00000548496 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
KRT18-205ENST00000548496 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
KRT18-205ENST00000548496 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
KRT18-205ENST00000548496 ZNF496Q96IT1 587 aaPredicted RBP15.88■□□□□ 0.13
KRT18-205ENST00000548496 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
KRT18-205ENST00000548496 ZNF827Q17R98 1081 aa15.87■□□□□ 0.13
KRT18-205ENST00000548496 SLC27A3Q5K4L6 730 aa15.87■□□□□ 0.13
KRT18-205ENST00000548496 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
KRT18-205ENST00000548496 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
KRT18-205ENST00000548496 PRAMEF22A3QJZ6 481 aa15.86■□□□□ 0.13
KRT18-205ENST00000548496 NBPF14Q5TI25 921 aa15.86■□□□□ 0.13
KRT18-205ENST00000548496 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
KRT18-205ENST00000548496 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
KRT18-205ENST00000548496 PDGFDQ9GZP0 370 aaPredicted RBP15.85■□□□□ 0.13
KRT18-205ENST00000548496 STK32BQ9NY57 414 aa15.85■□□□□ 0.13
KRT18-205ENST00000548496 TSPYL4Q9UJ04 414 aa15.85■□□□□ 0.13
KRT18-205ENST00000548496 C5P01031 1676 aa15.85■□□□□ 0.13
KRT18-205ENST00000548496 SLC15A2Q16348 729 aa15.84■□□□□ 0.13
KRT18-205ENST00000548496 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
KRT18-205ENST00000548496 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
KRT18-205ENST00000548496 UBR2Q8IWV8 1755 aa15.83■□□□□ 0.12
KRT18-205ENST00000548496 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
KRT18-205ENST00000548496 AMIGO3Q86WK7 504 aa15.83■□□□□ 0.12
KRT18-205ENST00000548496 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
KRT18-205ENST00000548496 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
KRT18-205ENST00000548496 TJP1Q07157 1748 aa15.82■□□□□ 0.12
KRT18-205ENST00000548496 TFCP2L1Q9NZI6 479 aa15.82■□□□□ 0.12
KRT18-205ENST00000548496 CHL1O00533 1208 aa15.81■□□□□ 0.12
KRT18-205ENST00000548496 PHF14O94880 888 aa15.81■□□□□ 0.12
KRT18-205ENST00000548496 C4BP0C0L5 1744 aa15.81■□□□□ 0.12
KRT18-205ENST00000548496 PIP4K2AP48426 406 aaPredicted RBP15.81■□□□□ 0.12
KRT18-205ENST00000548496 EIF4A1P60842 406 aaKnown RBP15.81■□□□□ 0.12
KRT18-205ENST00000548496 TUBGCP6Q96RT7 1819 aa15.81■□□□□ 0.12
KRT18-205ENST00000548496 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
KRT18-205ENST00000548496 USP16Q9Y5T5 823 aa15.81■□□□□ 0.12
KRT18-205ENST00000548496 GNPATO15228 680 aa15.8■□□□□ 0.12
KRT18-205ENST00000548496 MSH5O43196 834 aa15.8■□□□□ 0.12
KRT18-205ENST00000548496 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
KRT18-205ENST00000548496 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
KRT18-205ENST00000548496 AK7Q96M32 723 aa15.8■□□□□ 0.12
KRT18-205ENST00000548496 MBIPQ9NS73 344 aa15.8■□□□□ 0.12
KRT18-205ENST00000548496 A1BGP04217 495 aa15.79■□□□□ 0.12
KRT18-205ENST00000548496 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
KRT18-205ENST00000548496 CYP19A1P11511 503 aaPredicted RBP15.79■□□□□ 0.12
KRT18-205ENST00000548496 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
KRT18-205ENST00000548496 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
KRT18-205ENST00000548496 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
KRT18-205ENST00000548496 COL5A3P25940 1745 aaPredicted RBP15.79■□□□□ 0.12
KRT18-205ENST00000548496 ELL2O00472 640 aaPredicted RBP15.78■□□□□ 0.12
KRT18-205ENST00000548496 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
KRT18-205ENST00000548496 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
KRT18-205ENST00000548496 GNAI1P63096 354 aa15.78■□□□□ 0.12
KRT18-205ENST00000548496 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
KRT18-205ENST00000548496 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
KRT18-205ENST00000548496 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
KRT18-205ENST00000548496 NECTIN2Q92692 538 aa15.78■□□□□ 0.12
KRT18-205ENST00000548496 PNPLA7Q6ZV29 1317 aa15.77■□□□□ 0.12
KRT18-205ENST00000548496 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms