RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 COL3A1P02461 1466 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-207ENST00000548220 PPP1R37O75864 691 aa8.3□□□□□ -1.08
PTPRR-207ENST00000548220 FCHSD2O94868 740 aa8.3□□□□□ -1.08
PTPRR-207ENST00000548220 HOXC9P31274 260 aa8.3□□□□□ -1.08
PTPRR-207ENST00000548220 ADGRD1Q6QNK2 874 aa8.3□□□□□ -1.08
PTPRR-207ENST00000548220 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
PTPRR-207ENST00000548220 LMO7Q8WWI1 1683 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 SPRYD3Q8NCJ5 442 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 PRDM11Q9NQV5 511 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 KDRP35968 1356 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 NCAPD2Q15021 1401 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
PTPRR-207ENST00000548220 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-207ENST00000548220 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-207ENST00000548220 TK2O00142 265 aa8.28□□□□□ -1.08
PTPRR-207ENST00000548220 IL13P35225 146 aa8.28□□□□□ -1.08
PTPRR-207ENST00000548220 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-207ENST00000548220 FOXK1P85037 733 aa8.28□□□□□ -1.08
PTPRR-207ENST00000548220 NUTM2GQ5VZR2 741 aa8.28□□□□□ -1.08
PTPRR-207ENST00000548220 NUTM2AQ8IVF1 878 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-207ENST00000548220 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-207ENST00000548220 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
PTPRR-207ENST00000548220 KIAA0232Q92628 1395 aa8.28□□□□□ -1.08
PTPRR-207ENST00000548220 RGPD5Q99666 1765 aa8.27□□□□□ -1.09
PTPRR-207ENST00000548220 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.27□□□□□ -1.09
PTPRR-207ENST00000548220 CAMTA1Q9Y6Y1 1673 aa8.27□□□□□ -1.09
PTPRR-207ENST00000548220 TBC1D12O60347 775 aa8.27□□□□□ -1.09
PTPRR-207ENST00000548220 RRS1Q15050 365 aaKnown RBP8.27□□□□□ -1.09
PTPRR-207ENST00000548220 WDR43Q15061 677 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTPRR-207ENST00000548220 HSP90AB2PQ58FF8 381 aa8.27□□□□□ -1.09
PTPRR-207ENST00000548220 WDR17Q8IZU2 1322 aa8.26□□□□□ -1.09
PTPRR-207ENST00000548220 IGSF1Q8N6C5 1336 aa8.26□□□□□ -1.09
PTPRR-207ENST00000548220 FAM83GA6ND36 823 aa8.26□□□□□ -1.09
PTPRR-207ENST00000548220 EIF4A2Q14240 407 aaKnown RBP8.26□□□□□ -1.09
PTPRR-207ENST00000548220 PPP4R3BQ5MIZ7 849 aa8.26□□□□□ -1.09
PTPRR-207ENST00000548220 CABLES1Q8TDN4 633 aa8.26□□□□□ -1.09
PTPRR-207ENST00000548220 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-207ENST00000548220 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
PTPRR-207ENST00000548220 SLIT2O94813 1529 aa8.26□□□□□ -1.09
PTPRR-207ENST00000548220 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-207ENST00000548220 ZC3H6P61129 1189 aaKnown RBP8.25□□□□□ -1.09
PTPRR-207ENST00000548220 PLPP6Q8IY26 295 aa8.25□□□□□ -1.09
PTPRR-207ENST00000548220 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
PTPRR-207ENST00000548220 CDCA7Q9BWT1 371 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-207ENST00000548220 CARD10Q9BWT7 1032 aa8.25□□□□□ -1.09
PTPRR-207ENST00000548220 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
PTPRR-207ENST00000548220 RGS17Q9UGC6 210 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-207ENST00000548220 COL5A2P05997 1499 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-207ENST00000548220 NEFMP07197 916 aa8.24□□□□□ -1.09
PTPRR-207ENST00000548220 CENPBP07199 599 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-207ENST00000548220 ADAMTS8Q9UP79 889 aa8.24□□□□□ -1.09
PTPRR-207ENST00000548220 CRB1P82279 1406 aa8.24□□□□□ -1.09
PTPRR-207ENST00000548220 PLCH1Q4KWH8 1693 aa8.24□□□□□ -1.09
PTPRR-207ENST00000548220 ADAMTS2O95450 1211 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-207ENST00000548220 FBLN1P23142 703 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 EVA1CP58658 441 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPRR-207ENST00000548220 AMOTQ4VCS5 1084 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 ILDR2Q71H61 639 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 UNC5CLQ8IV45 518 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 ANKRD24Q8TF21 1146 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 RUNDC1Q96C34 613 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 EYA1Q99502 592 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 NRAPQ86VF7 1730 aa8.23□□□□□ -1.09
PTPRR-207ENST00000548220 HTATSF1O43719 755 aaKnown RBP8.22□□□□□ -1.09
PTPRR-207ENST00000548220 CCDC27Q2M243 656 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 CCDC184Q52MB2 194 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 NGLY1Q96IV0 654 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 BCL9LQ86UU0 1499 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 VPS72Q15906 364 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 PLEKHF1Q96S99 279 aa8.22□□□□□ -1.09
PTPRR-207ENST00000548220 RYDENQ9NUL5 291 aaKnown RBP8.22□□□□□ -1.09
PTPRR-207ENST00000548220 U2SURPO15042 1029 aaKnown RBP8.21□□□□□ -1.1
PTPRR-207ENST00000548220 ONECUT3O60422 494 aaPredicted RBP8.21□□□□□ -1.1
PTPRR-207ENST00000548220 CNGB1Q14028 1251 aaPredicted RBP8.21□□□□□ -1.1
PTPRR-207ENST00000548220 DSG2Q14126 1118 aa8.21□□□□□ -1.1
PTPRR-207ENST00000548220 CHRNA2Q15822 529 aa8.21□□□□□ -1.1
PTPRR-207ENST00000548220 SULT6B1Q6IMI4 303 aa8.21□□□□□ -1.1
PTPRR-207ENST00000548220 POTEAQ6S8J7 498 aa8.21□□□□□ -1.1
PTPRR-207ENST00000548220 RGPD2P0DJD1 1756 aa8.21□□□□□ -1.1
PTPRR-207ENST00000548220 PARP4Q9UKK3 1724 aaKnown RBP8.2□□□□□ -1.1
PTPRR-207ENST00000548220 SPATA31A1Q5TZJ5 1347 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 SPATA31A5Q5VU36 1347 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 SPATA31A7Q8IWB4 1347 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 LRP6O75581 1613 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 HRO43593 1189 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 PSEN2P49810 448 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 CALD1Q05682 793 aaKnown RBP8.2□□□□□ -1.1
PTPRR-207ENST00000548220 LMOD3Q0VAK6 560 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 PLEKHO1Q53GL0 409 aaPredicted RBP8.2□□□□□ -1.1
PTPRR-207ENST00000548220 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 ZNF772Q68DY9 489 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms