RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TRIM35Q9UPQ4 493 aa30.44■■■□□ 2.46
SMARCD1-203ENST00000547247 MRC1P22897 1456 aa30.43■■■□□ 2.46
SMARCD1-203ENST00000547247 SENP3-EIF4A1A0A087X0R7 540 aa30.42■■■□□ 2.46
SMARCD1-203ENST00000547247 EN1Q05925 392 aaPredicted RBP30.42■■■□□ 2.46
SMARCD1-203ENST00000547247 BTAF1O14981 1849 aa30.42■■■□□ 2.46
SMARCD1-203ENST00000547247 NCBP3Q53F19 620 aaKnown RBP30.41■■■□□ 2.46
SMARCD1-203ENST00000547247 THUMPD2Q9BTF0 503 aaKnown RBP30.4■■■□□ 2.46
SMARCD1-203ENST00000547247 CCDC27Q2M243 656 aa30.38■■■□□ 2.45
SMARCD1-203ENST00000547247 NGEFQ8N5V2 710 aa30.38■■■□□ 2.45
SMARCD1-203ENST00000547247 SALL2Q9Y467 1007 aaPredicted RBP30.37■■■□□ 2.45
SMARCD1-203ENST00000547247 PLSCR1O15162 318 aa30.37■■■□□ 2.45
SMARCD1-203ENST00000547247 TAF7Q15545 349 aaPredicted RBP30.36■■■□□ 2.45
SMARCD1-203ENST00000547247 SMARCC1Q92922 1105 aaPredicted RBP30.36■■■□□ 2.45
SMARCD1-203ENST00000547247 ASAP1Q9ULH1 1129 aa30.36■■■□□ 2.45
SMARCD1-203ENST00000547247 EZH2Q15910 746 aaKnown RBP30.35■■■□□ 2.45
SMARCD1-203ENST00000547247 RGPD3A6NKT7 1758 aaPredicted RBP30.35■■■□□ 2.45
SMARCD1-203ENST00000547247 RGPD4Q7Z3J3 1758 aa30.35■■■□□ 2.45
SMARCD1-203ENST00000547247 SIPA1L3O60292 1781 aaPredicted RBP30.34■■■□□ 2.45
SMARCD1-203ENST00000547247 ATG3Q9NT62 314 aa30.34■■■□□ 2.45
SMARCD1-203ENST00000547247 BTBD11A6QL63 1104 aa30.33■■■□□ 2.45
SMARCD1-203ENST00000547247 WWC1Q8IX03 1113 aa30.33■■■□□ 2.45
SMARCD1-203ENST00000547247 CAMKK2Q96RR4 588 aa30.33■■■□□ 2.45
SMARCD1-203ENST00000547247 RREB1Q92766 1687 aa30.32■■■□□ 2.44
SMARCD1-203ENST00000547247 PALLDQ8WX93 1383 aa30.32■■■□□ 2.44
SMARCD1-203ENST00000547247 CALD1Q05682 793 aaKnown RBP30.32■■■□□ 2.44
SMARCD1-203ENST00000547247 SLC39A6Q13433 755 aa30.3■■■□□ 2.44
SMARCD1-203ENST00000547247 ZNF790Q6PG37 636 aa30.28■■■□□ 2.44
SMARCD1-203ENST00000547247 TTC5Q8N0Z6 440 aa30.28■■■□□ 2.44
SMARCD1-203ENST00000547247 NUP188Q5SRE5 1749 aa30.27■■■□□ 2.44
SMARCD1-203ENST00000547247 MIS18AQ9NYP9 233 aa30.27■■■□□ 2.44
SMARCD1-203ENST00000547247 TXNRD1Q16881 649 aa30.26■■■□□ 2.43
SMARCD1-203ENST00000547247 BABAM1Q9NWV8 329 aa30.26■■■□□ 2.43
SMARCD1-203ENST00000547247 PAPPAQ13219 1627 aa30.26■■■□□ 2.43
SMARCD1-203ENST00000547247 LAS1LQ9Y4W2 734 aaKnown RBP30.25■■■□□ 2.43
SMARCD1-203ENST00000547247 LY75O60449 1722 aa30.25■■■□□ 2.43
SMARCD1-203ENST00000547247 PTCD1O75127 700 aaKnown RBP30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 WDR63Q8IWG1 891 aa30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 PROM2Q8N271 834 aa30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 CFAP44Q96MT7 982 aa30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 RBM42Q9BTD8 480 aaKnown RBP30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 TSPYL4Q9UJ04 414 aa30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 LOC102724428A0A0B4J2F2 783 aa30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 SIK1P57059 783 aa30.24■■■□□ 2.43
SMARCD1-203ENST00000547247 HNRNPUQ00839 825 aaKnown RBP eCLIP30.23■■■□□ 2.43
SMARCD1-203ENST00000547247 SLC27A3Q5K4L6 730 aa30.23■■■□□ 2.43
SMARCD1-203ENST00000547247 CCNL1Q9UK58 526 aaPredicted RBP30.23■■■□□ 2.43
SMARCD1-203ENST00000547247 CHL1O00533 1208 aa30.22■■■□□ 2.43
SMARCD1-203ENST00000547247 KCNQ3O43525 872 aa30.22■■■□□ 2.43
SMARCD1-203ENST00000547247 GNAI1P63096 354 aa30.22■■■□□ 2.43
SMARCD1-203ENST00000547247 IFT57Q9NWB7 429 aa30.22■■■□□ 2.43
SMARCD1-203ENST00000547247 IL16Q14005 1332 aa30.21■■■□□ 2.43
SMARCD1-203ENST00000547247 ZNF521Q96K83 1311 aa30.2■■■□□ 2.43
SMARCD1-203ENST00000547247 ZNF853P0CG23 659 aa30.2■■■□□ 2.42
SMARCD1-203ENST00000547247 ZNF496Q96IT1 587 aaPredicted RBP30.2■■■□□ 2.42
SMARCD1-203ENST00000547247 FMNL2Q96PY5 1086 aa30.2■■■□□ 2.42
SMARCD1-203ENST00000547247 KCPQ6ZWJ8 1503 aa30.19■■■□□ 2.42
SMARCD1-203ENST00000547247 KDM3BQ7LBC6 1761 aa30.19■■■□□ 2.42
SMARCD1-203ENST00000547247 UBR2Q8IWV8 1755 aa30.19■■■□□ 2.42
SMARCD1-203ENST00000547247 ATP6V1AP38606 617 aa30.19■■■□□ 2.42
SMARCD1-203ENST00000547247 LRRC4BQ9NT99 713 aa30.19■■■□□ 2.42
SMARCD1-203ENST00000547247 KCNQ4P56696 695 aa30.18■■■□□ 2.42
SMARCD1-203ENST00000547247 SLC4A9Q96Q91 983 aa30.18■■■□□ 2.42
SMARCD1-203ENST00000547247 VSIG10Q8N0Z9 540 aa30.16■■■□□ 2.42
SMARCD1-203ENST00000547247 EIF4A1P60842 406 aaKnown RBP30.15■■■□□ 2.42
SMARCD1-203ENST00000547247 MBIPQ9NS73 344 aa30.15■■■□□ 2.42
SMARCD1-203ENST00000547247 HEG1Q9ULI3 1381 aa30.15■■■□□ 2.42
SMARCD1-203ENST00000547247 HMGB2P26583 209 aaKnown RBP30.15■■■□□ 2.42
SMARCD1-203ENST00000547247 ZNF831Q5JPB2 1677 aa30.14■■■□□ 2.42
SMARCD1-203ENST00000547247 GOLGA2Q08379 1002 aa30.13■■■□□ 2.41
SMARCD1-203ENST00000547247 ITPK1Q13572 414 aa30.12■■■□□ 2.41
SMARCD1-203ENST00000547247 SNRPA1P09661 255 aaKnown RBP30.1■■■□□ 2.41
SMARCD1-203ENST00000547247 TEX13AQ9BXU3 409 aaPredicted RBP30.1■■■□□ 2.41
SMARCD1-203ENST00000547247 SPINK5Q9NQ38 1064 aaPredicted RBP30.1■■■□□ 2.41
SMARCD1-203ENST00000547247 NBPF14Q5TI25 921 aa30.09■■■□□ 2.41
SMARCD1-203ENST00000547247 DNAJC10Q8IXB1 793 aa30.09■■■□□ 2.41
SMARCD1-203ENST00000547247 TSR2Q969E8 191 aaKnown RBP30.09■■■□□ 2.41
SMARCD1-203ENST00000547247 PSDA5PKW4 1024 aaPredicted RBP30.08■■■□□ 2.41
SMARCD1-203ENST00000547247 LINC00116Q8NCU8 138 aa30.08■■■□□ 2.41
SMARCD1-203ENST00000547247 MYH16Q9H6N6 1097 aa30.08■■■□□ 2.41
SMARCD1-203ENST00000547247 CICQ96RK0 1608 aaPredicted RBP30.08■■■□□ 2.41
SMARCD1-203ENST00000547247 C5P01031 1676 aa30.08■■■□□ 2.41
SMARCD1-203ENST00000547247 TAF1LQ8IZX4 1826 aa30.08■■■□□ 2.41
SMARCD1-203ENST00000547247 TJP1Q07157 1748 aa30.07■■■□□ 2.4
SMARCD1-203ENST00000547247 GIGYF1O75420 1035 aaPredicted RBP30.07■■■□□ 2.4
SMARCD1-203ENST00000547247 R3HDM1Q15032 1099 aaKnown RBP30.07■■■□□ 2.4
SMARCD1-203ENST00000547247 ZBED9Q6R2W3 1325 aa30.06■■■□□ 2.4
SMARCD1-203ENST00000547247 E9PSI1 815 aa30.06■■■□□ 2.4
SMARCD1-203ENST00000547247 ANO8Q9HCE9 1232 aaPredicted RBP30.06■■■□□ 2.4
SMARCD1-203ENST00000547247 FANCIQ9NVI1 1328 aa30.05■■■□□ 2.4
SMARCD1-203ENST00000547247 STARD3NLO95772 234 aa30.05■■■□□ 2.4
SMARCD1-203ENST00000547247 PRAMEF22A3QJZ6 481 aa30.04■■■□□ 2.4
SMARCD1-203ENST00000547247 CYP19A1P11511 503 aaPredicted RBP30.03■■■□□ 2.4
SMARCD1-203ENST00000547247 SLFN5Q08AF3 891 aa30.03■■■□□ 2.4
SMARCD1-203ENST00000547247 KRT24Q2M2I5 525 aa30.03■■■□□ 2.4
SMARCD1-203ENST00000547247 USP16Q9Y5T5 823 aa30.03■■■□□ 2.4
SMARCD1-203ENST00000547247 COL5A3P25940 1745 aaPredicted RBP30.03■■■□□ 2.4
SMARCD1-203ENST00000547247 CDCA7LQ96GN5 454 aa30.03■■■□□ 2.4
SMARCD1-203ENST00000547247 C4BP0C0L5 1744 aa30.02■■■□□ 2.4
SMARCD1-203ENST00000547247 RC3H1Q5TC82 1133 aaKnown RBP30.02■■■□□ 2.4
SMARCD1-203ENST00000547247 STK32BQ9NY57 414 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms