RNA–Protein interactions for RNA: ENST00000547235.5

NPIPB12-202, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 3

Gene NPIPB12, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-202ENST00000547235 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
NPIPB12-202ENST00000547235 APAF1O14727 1248 aa13.25□□□□□ -0.29
NPIPB12-202ENST00000547235 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
NPIPB12-202ENST00000547235 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
NPIPB12-202ENST00000547235 SALL2Q9Y467 1007 aaPredicted RBP13.24□□□□□ -0.29
NPIPB12-202ENST00000547235 COL24A1Q17RW2 1714 aa13.23□□□□□ -0.29
NPIPB12-202ENST00000547235 BTAF1O14981 1849 aa13.23□□□□□ -0.29
NPIPB12-202ENST00000547235 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
NPIPB12-202ENST00000547235 NBPF6Q5VWK0 638 aa13.22□□□□□ -0.29
NPIPB12-202ENST00000547235 NBPF4Q96M43 638 aa13.22□□□□□ -0.29
NPIPB12-202ENST00000547235 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
NPIPB12-202ENST00000547235 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.29
NPIPB12-202ENST00000547235 RGPD5Q99666 1765 aa13.21□□□□□ -0.29
NPIPB12-202ENST00000547235 ADCY9O60503 1353 aa13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 KDRP35968 1356 aa13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
NPIPB12-202ENST00000547235 KCNQ4P56696 695 aa13.19□□□□□ -0.3
NPIPB12-202ENST00000547235 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
NPIPB12-202ENST00000547235 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
NPIPB12-202ENST00000547235 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
NPIPB12-202ENST00000547235 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
NPIPB12-202ENST00000547235 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
NPIPB12-202ENST00000547235 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 RIPK4P57078 832 aa13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
NPIPB12-202ENST00000547235 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
NPIPB12-202ENST00000547235 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
NPIPB12-202ENST00000547235 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 APLP1P51693 650 aa13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
NPIPB12-202ENST00000547235 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
NPIPB12-202ENST00000547235 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
NPIPB12-202ENST00000547235 WDR63Q8IWG1 891 aa13.15□□□□□ -0.3
NPIPB12-202ENST00000547235 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
NPIPB12-202ENST00000547235 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
NPIPB12-202ENST00000547235 KIF3CO14782 793 aa13.14□□□□□ -0.31
NPIPB12-202ENST00000547235 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
NPIPB12-202ENST00000547235 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
NPIPB12-202ENST00000547235 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
NPIPB12-202ENST00000547235 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
NPIPB12-202ENST00000547235 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
NPIPB12-202ENST00000547235 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
NPIPB12-202ENST00000547235 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
NPIPB12-202ENST00000547235 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
NPIPB12-202ENST00000547235 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
NPIPB12-202ENST00000547235 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
NPIPB12-202ENST00000547235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPIPB12-202ENST00000547235 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
NPIPB12-202ENST00000547235 E9PSI1 815 aa13.11□□□□□ -0.31
NPIPB12-202ENST00000547235 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
NPIPB12-202ENST00000547235 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
NPIPB12-202ENST00000547235 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
NPIPB12-202ENST00000547235 IL16Q14005 1332 aa13.11□□□□□ -0.31
NPIPB12-202ENST00000547235 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
NPIPB12-202ENST00000547235 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
NPIPB12-202ENST00000547235 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
NPIPB12-202ENST00000547235 LY75O60449 1722 aa13.1□□□□□ -0.31
NPIPB12-202ENST00000547235 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
NPIPB12-202ENST00000547235 TOMM70O94826 608 aa13.09□□□□□ -0.31
NPIPB12-202ENST00000547235 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
NPIPB12-202ENST00000547235 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
NPIPB12-202ENST00000547235 MCM10Q7L590 875 aa13.07□□□□□ -0.32
NPIPB12-202ENST00000547235 IFNL2Q8IZJ0 200 aa13.07□□□□□ -0.32
NPIPB12-202ENST00000547235 DOT1LQ8TEK3 1739 aa13.07□□□□□ -0.32
NPIPB12-202ENST00000547235 MEGF6O75095 1541 aa13.07□□□□□ -0.32
NPIPB12-202ENST00000547235 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 GNAI1P63096 354 aa13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 AK7Q96M32 723 aa13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
NPIPB12-202ENST00000547235 PHKG2P15735 406 aa13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
NPIPB12-202ENST00000547235 DLG5Q8TDM6 1919 aa13.04□□□□□ -0.32
NPIPB12-202ENST00000547235 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
NPIPB12-202ENST00000547235 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
NPIPB12-202ENST00000547235 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
NPIPB12-202ENST00000547235 TEFQ10587 303 aa13.03□□□□□ -0.32
NPIPB12-202ENST00000547235 COL13A1Q5TAT6 717 aaPredicted RBP13.03□□□□□ -0.32
NPIPB12-202ENST00000547235 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
NPIPB12-202ENST00000547235 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms