RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
VDR-204ENST00000547065 OVOS2A0A0G2JMS6 1433 aa23.29■■□□□ 1.32
VDR-204ENST00000547065 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
VDR-204ENST00000547065 BTBD11A6QL63 1104 aa23.28■■□□□ 1.32
VDR-204ENST00000547065 MPRIPQ6WCQ1 1025 aa23.28■■□□□ 1.32
VDR-204ENST00000547065 NECTIN2Q92692 538 aa23.28■■□□□ 1.32
VDR-204ENST00000547065 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
VDR-204ENST00000547065 ERBB3P21860 1342 aa23.28■■□□□ 1.32
VDR-204ENST00000547065 HMMRO75330 724 aa23.27■■□□□ 1.32
VDR-204ENST00000547065 BECN1Q14457 450 aa23.27■■□□□ 1.32
VDR-204ENST00000547065 CAMTA1Q9Y6Y1 1673 aa23.27■■□□□ 1.32
VDR-204ENST00000547065 GNAI2P04899 355 aa23.26■■□□□ 1.31
VDR-204ENST00000547065 GNAI3P08754 354 aa23.26■■□□□ 1.31
VDR-204ENST00000547065 NBR1Q14596 966 aa23.26■■□□□ 1.31
VDR-204ENST00000547065 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
VDR-204ENST00000547065 FAM208AQ9UK61 1670 aaKnown RBP23.24■■□□□ 1.31
VDR-204ENST00000547065 C22orf23Q9BZE7 217 aa23.24■■□□□ 1.31
VDR-204ENST00000547065 CACNA1FO60840 1977 aa23.24■■□□□ 1.31
VDR-204ENST00000547065 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
VDR-204ENST00000547065 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
VDR-204ENST00000547065 LMTK3Q96Q04 1460 aa23.23■■□□□ 1.31
VDR-204ENST00000547065 RAPGEF4Q8WZA2 1011 aa23.22■■□□□ 1.31
VDR-204ENST00000547065 KCNQ3O43525 872 aa23.22■■□□□ 1.31
VDR-204ENST00000547065 EIF2S2P20042 333 aaKnown RBP23.22■■□□□ 1.31
VDR-204ENST00000547065 PLEKHM2Q8IWE5 1019 aa23.22■■□□□ 1.31
VDR-204ENST00000547065 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
VDR-204ENST00000547065 PXDNLA1KZ92 1463 aa23.21■■□□□ 1.31
VDR-204ENST00000547065 PXDNQ92626 1479 aa23.21■■□□□ 1.31
VDR-204ENST00000547065 KDM3BQ7LBC6 1761 aa23.2■■□□□ 1.3
VDR-204ENST00000547065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.2■■□□□ 1.3
VDR-204ENST00000547065 TATP17735 454 aaPredicted RBP23.19■■□□□ 1.3
VDR-204ENST00000547065 PHAXQ9H814 394 aaKnown RBP23.19■■□□□ 1.3
VDR-204ENST00000547065 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
VDR-204ENST00000547065 EIF5BO60841 1220 aaKnown RBP23.18■■□□□ 1.3
VDR-204ENST00000547065 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
VDR-204ENST00000547065 CABLES1Q8TDN4 633 aa23.18■■□□□ 1.3
VDR-204ENST00000547065 USP35Q9P2H5 1018 aa23.18■■□□□ 1.3
VDR-204ENST00000547065 PLEKHG2Q9H7P9 1386 aa23.18■■□□□ 1.3
VDR-204ENST00000547065 ABCC6O95255 1503 aa23.18■■□□□ 1.3
VDR-204ENST00000547065 KDM4FA0A1W2PPD8 638 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 BRINP3Q76B58 766 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 CPDO75976 1380 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 CSB-PGBD3P0DP91 1061 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 CHPF2Q9P2E5 772 aa23.17■■□□□ 1.3
VDR-204ENST00000547065 RGPD5Q99666 1765 aa23.16■■□□□ 1.3
VDR-204ENST00000547065 COL18A1P39060 1754 aa23.15■■□□□ 1.3
VDR-204ENST00000547065 GIGYF1O75420 1035 aaPredicted RBP23.15■■□□□ 1.3
VDR-204ENST00000547065 C16orf71Q8IYS4 520 aaPredicted RBP23.15■■□□□ 1.3
VDR-204ENST00000547065 SRCIN1Q9C0H9 1055 aa23.15■■□□□ 1.3
VDR-204ENST00000547065 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
VDR-204ENST00000547065 DBF4Q9UBU7 674 aaPredicted RBP23.15■■□□□ 1.3
VDR-204ENST00000547065 TTC22Q5TAA0 569 aa23.14■■□□□ 1.3
VDR-204ENST00000547065 CDC45O75419 566 aa23.14■■□□□ 1.29
VDR-204ENST00000547065 RBM25P49756 843 aaKnown RBP23.14■■□□□ 1.29
VDR-204ENST00000547065 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
VDR-204ENST00000547065 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
VDR-204ENST00000547065 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
VDR-204ENST00000547065 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
VDR-204ENST00000547065 SMARCA5O60264 1052 aaPredicted RBP23.12■■□□□ 1.29
VDR-204ENST00000547065 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
VDR-204ENST00000547065 PHKG2P15735 406 aa23.12■■□□□ 1.29
VDR-204ENST00000547065 DNAAF4Q8WXU2 420 aa23.12■■□□□ 1.29
VDR-204ENST00000547065 ADAMTS7Q9UKP4 1686 aa23.12■■□□□ 1.29
VDR-204ENST00000547065 IFNL2Q8IZJ0 200 aa23.12■■□□□ 1.29
VDR-204ENST00000547065 LRRFIP2Q9Y608 721 aaKnown RBP23.12■■□□□ 1.29
VDR-204ENST00000547065 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
VDR-204ENST00000547065 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
VDR-204ENST00000547065 PI4KAP2A4QPH2 592 aa23.1■■□□□ 1.29
VDR-204ENST00000547065 APBB1O00213 710 aa23.1■■□□□ 1.29
VDR-204ENST00000547065 BEND3Q5T5X7 828 aa23.1■■□□□ 1.29
VDR-204ENST00000547065 PI4KAP1Q8N8J0 262 aa23.1■■□□□ 1.29
VDR-204ENST00000547065 SLC52A2Q9HAB3 445 aa23.1■■□□□ 1.29
VDR-204ENST00000547065 STRCQ7RTU9 1775 aa23.1■■□□□ 1.29
VDR-204ENST00000547065 N4BP2Q86UW6 1770 aaPredicted RBP23.1■■□□□ 1.29
VDR-204ENST00000547065 SOS2Q07890 1332 aaPredicted RBP23.09■■□□□ 1.29
VDR-204ENST00000547065 OTUD7AQ8TE49 926 aaPredicted RBP23.09■■□□□ 1.29
VDR-204ENST00000547065 OSBPL3Q9H4L5 887 aa23.09■■□□□ 1.29
VDR-204ENST00000547065 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
VDR-204ENST00000547065 PNMA6EA0A0J9YXQ4 647 aa23.08■■□□□ 1.29
VDR-204ENST00000547065 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.29
VDR-204ENST00000547065 MEGF6O75095 1541 aa23.07■■□□□ 1.28
VDR-204ENST00000547065 HSP90AB1P08238 724 aaKnown RBP23.07■■□□□ 1.28
VDR-204ENST00000547065 LRRCC1Q9C099 1032 aa23.07■■□□□ 1.28
VDR-204ENST00000547065 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 DCAF5Q96JK2 942 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
VDR-204ENST00000547065 CRYBG1Q9Y4K1 1723 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 KDM6AO15550 1401 aaPredicted RBP23.06■■□□□ 1.28
VDR-204ENST00000547065 ANXA1P04083 346 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 SSH3Q8TE77 659 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 EXOC6BQ9Y2D4 811 aa23.06■■□□□ 1.28
VDR-204ENST00000547065 ADCY9O60503 1353 aa23.05■■□□□ 1.28
VDR-204ENST00000547065 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
VDR-204ENST00000547065 IBTKQ9P2D0 1353 aaPredicted RBP23.05■■□□□ 1.28
VDR-204ENST00000547065 ALDH1L1O75891 902 aa23.04■■□□□ 1.28
VDR-204ENST00000547065 NFKBIBQ15653 356 aa23.04■■□□□ 1.28
VDR-204ENST00000547065 NFATC2IPQ8NCF5 419 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms