RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 PRIM1P49642 420 aaKnown RBP21.4■■□□□ 1.02
LETMD1-205ENST00000546992 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
LETMD1-205ENST00000546992 NFATC2IPQ8NCF5 419 aa21.38■■□□□ 1.01
LETMD1-205ENST00000546992 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
LETMD1-205ENST00000546992 CABP4P57796 275 aa21.37■■□□□ 1.01
LETMD1-205ENST00000546992 FAM196AQ6ZSG2 479 aa21.37■■□□□ 1.01
LETMD1-205ENST00000546992 PIGBQ92521 554 aa21.37■■□□□ 1.01
LETMD1-205ENST00000546992 KCPQ6ZWJ8 1503 aa21.37■■□□□ 1.01
LETMD1-205ENST00000546992 LY75O60449 1722 aa21.37■■□□□ 1.01
LETMD1-205ENST00000546992 TEFQ10587 303 aa21.36■■□□□ 1.01
LETMD1-205ENST00000546992 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
LETMD1-205ENST00000546992 CDCA7LQ96GN5 454 aa21.36■■□□□ 1.01
LETMD1-205ENST00000546992 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
LETMD1-205ENST00000546992 C5P01031 1676 aa21.36■■□□□ 1.01
LETMD1-205ENST00000546992 IL16Q14005 1332 aa21.35■■□□□ 1.01
LETMD1-205ENST00000546992 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
LETMD1-205ENST00000546992 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
LETMD1-205ENST00000546992 KCNQ3O43525 872 aa21.34■■□□□ 1.01
LETMD1-205ENST00000546992 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
LETMD1-205ENST00000546992 ILDR2Q71H61 639 aa21.34■■□□□ 1.01
LETMD1-205ENST00000546992 TRIM37O94972 964 aa21.33■■□□□ 1.01
LETMD1-205ENST00000546992 SLC39A6Q13433 755 aa21.33■■□□□ 1.01
LETMD1-205ENST00000546992 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
LETMD1-205ENST00000546992 TJP1Q07157 1748 aa21.32■■□□□ 1
LETMD1-205ENST00000546992 CHL1O00533 1208 aa21.32■■□□□ 1
LETMD1-205ENST00000546992 CFAP44Q96MT7 982 aa21.32■■□□□ 1
LETMD1-205ENST00000546992 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
LETMD1-205ENST00000546992 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
LETMD1-205ENST00000546992 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
LETMD1-205ENST00000546992 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
LETMD1-205ENST00000546992 GOLGA2Q08379 1002 aa21.31■■□□□ 1
LETMD1-205ENST00000546992 SLFN5Q08AF3 891 aa21.31■■□□□ 1
LETMD1-205ENST00000546992 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
LETMD1-205ENST00000546992 MBIPQ9NS73 344 aa21.31■■□□□ 1
LETMD1-205ENST00000546992 ATG3Q9NT62 314 aa21.31■■□□□ 1
LETMD1-205ENST00000546992 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
LETMD1-205ENST00000546992 BTBD11A6QL63 1104 aa21.3■■□□□ 1
LETMD1-205ENST00000546992 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
LETMD1-205ENST00000546992 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
LETMD1-205ENST00000546992 ZNF831Q5JPB2 1677 aa21.3■■□□□ 1
LETMD1-205ENST00000546992 LAMB4A4D0S4 1761 aa21.3■■□□□ 1
LETMD1-205ENST00000546992 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
LETMD1-205ENST00000546992 TAF1LQ8IZX4 1826 aa21.29■■□□□ 1
LETMD1-205ENST00000546992 GNAI1P63096 354 aa21.29■■□□□ 1
LETMD1-205ENST00000546992 TRMT2AQ8IZ69 625 aaKnown RBP21.29■■□□□ 1
LETMD1-205ENST00000546992 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
LETMD1-205ENST00000546992 ZNF790Q6PG37 636 aa21.28■■□□□ 1
LETMD1-205ENST00000546992 COL5A3P25940 1745 aaPredicted RBP21.28■■□□□ 1
LETMD1-205ENST00000546992 KRT24Q2M2I5 525 aa21.27■■□□□ 1
LETMD1-205ENST00000546992 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
LETMD1-205ENST00000546992 PALLDQ8WX93 1383 aa21.26■□□□□ 0.99
LETMD1-205ENST00000546992 E9PSI1 815 aa21.26■□□□□ 0.99
LETMD1-205ENST00000546992 DUSP27Q5VZP5 1158 aa21.26■□□□□ 0.99
LETMD1-205ENST00000546992 HEG1Q9ULI3 1381 aa21.25■□□□□ 0.99
LETMD1-205ENST00000546992 EIF4A1P60842 406 aaKnown RBP21.25■□□□□ 0.99
LETMD1-205ENST00000546992 ZNF496Q96IT1 587 aaPredicted RBP21.25■□□□□ 0.99
LETMD1-205ENST00000546992 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
LETMD1-205ENST00000546992 RREB1Q92766 1687 aa21.24■□□□□ 0.99
LETMD1-205ENST00000546992 PTCD1O75127 700 aaKnown RBP21.22■□□□□ 0.99
LETMD1-205ENST00000546992 MYH16Q9H6N6 1097 aa21.22■□□□□ 0.99
LETMD1-205ENST00000546992 MYH14Q7Z406 1995 aaKnown RBP21.21■□□□□ 0.99
LETMD1-205ENST00000546992 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
LETMD1-205ENST00000546992 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
LETMD1-205ENST00000546992 C8orf58Q8NAV2 365 aa21.21■□□□□ 0.99
LETMD1-205ENST00000546992 NUP188Q5SRE5 1749 aa21.21■□□□□ 0.99
LETMD1-205ENST00000546992 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
LETMD1-205ENST00000546992 TTC5Q8N0Z6 440 aa21.2■□□□□ 0.98
LETMD1-205ENST00000546992 APBA3O96018 575 aa21.19■□□□□ 0.98
LETMD1-205ENST00000546992 SMARCC1Q92922 1105 aaPredicted RBP21.19■□□□□ 0.98
LETMD1-205ENST00000546992 LOC102724428A0A0B4J2F2 783 aa21.18■□□□□ 0.98
LETMD1-205ENST00000546992 KCNQ4P56696 695 aa21.18■□□□□ 0.98
LETMD1-205ENST00000546992 SIK1P57059 783 aa21.18■□□□□ 0.98
LETMD1-205ENST00000546992 FMNL2Q96PY5 1086 aa21.18■□□□□ 0.98
LETMD1-205ENST00000546992 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
LETMD1-205ENST00000546992 GIGYF1O75420 1035 aaPredicted RBP21.17■□□□□ 0.98
LETMD1-205ENST00000546992 ITPK1Q13572 414 aa21.17■□□□□ 0.98
LETMD1-205ENST00000546992 PROM2Q8N271 834 aa21.17■□□□□ 0.98
LETMD1-205ENST00000546992 TUBGCP6Q96RT7 1819 aa21.17■□□□□ 0.98
LETMD1-205ENST00000546992 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
LETMD1-205ENST00000546992 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
LETMD1-205ENST00000546992 PLSCR1O15162 318 aa21.16■□□□□ 0.98
LETMD1-205ENST00000546992 UPF1Q92900 1129 aaKnown RBP eCLIP21.16■□□□□ 0.98
LETMD1-205ENST00000546992 LRRC4BQ9NT99 713 aa21.16■□□□□ 0.98
LETMD1-205ENST00000546992 DNAJC10Q8IXB1 793 aa21.15■□□□□ 0.98
LETMD1-205ENST00000546992 DEFB132Q7Z7B7 95 aa21.14■□□□□ 0.97
LETMD1-205ENST00000546992 EN1Q05925 392 aaPredicted RBP21.13■□□□□ 0.97
LETMD1-205ENST00000546992 TXNRD1Q16881 649 aa21.13■□□□□ 0.97
LETMD1-205ENST00000546992 TWISTNBQ3B726 338 aaPredicted RBP21.13■□□□□ 0.97
LETMD1-205ENST00000546992 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
LETMD1-205ENST00000546992 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
LETMD1-205ENST00000546992 USP16Q9Y5T5 823 aa21.13■□□□□ 0.97
LETMD1-205ENST00000546992 CACNA1FO60840 1977 aa21.13■□□□□ 0.97
LETMD1-205ENST00000546992 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
LETMD1-205ENST00000546992 SNRPA1P09661 255 aaKnown RBP21.12■□□□□ 0.97
LETMD1-205ENST00000546992 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
LETMD1-205ENST00000546992 EZH2Q15910 746 aaKnown RBP21.12■□□□□ 0.97
LETMD1-205ENST00000546992 LINC00116Q8NCU8 138 aa21.12■□□□□ 0.97
LETMD1-205ENST00000546992 CCNL1Q9UK58 526 aaPredicted RBP21.12■□□□□ 0.97
LETMD1-205ENST00000546992 VAMP4O75379 141 aa21.11■□□□□ 0.97
LETMD1-205ENST00000546992 CYP19A1P11511 503 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms