RNA–Protein interactions for RNA: ENST00000546498.1

PKP2-203, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-203ENST00000546498 BTAF1O14981 1849 aa17.82■□□□□ 0.44
PKP2-203ENST00000546498 HMGB2P26583 209 aaKnown RBP17.82■□□□□ 0.44
PKP2-203ENST00000546498 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
PKP2-203ENST00000546498 SLC27A3Q5K4L6 730 aa17.82■□□□□ 0.44
PKP2-203ENST00000546498 MRC1P22897 1456 aa17.82■□□□□ 0.44
PKP2-203ENST00000546498 TXNRD1Q16881 649 aa17.81■□□□□ 0.44
PKP2-203ENST00000546498 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
PKP2-203ENST00000546498 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
PKP2-203ENST00000546498 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
PKP2-203ENST00000546498 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
PKP2-203ENST00000546498 SCN11AQ9UI33 1791 aa17.8■□□□□ 0.44
PKP2-203ENST00000546498 ITGB4P16144 1822 aa17.79■□□□□ 0.44
PKP2-203ENST00000546498 BTBD11A6QL63 1104 aa17.79■□□□□ 0.44
PKP2-203ENST00000546498 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
PKP2-203ENST00000546498 ADAMTS7Q9UKP4 1686 aa17.78■□□□□ 0.44
PKP2-203ENST00000546498 CALD1Q05682 793 aaKnown RBP17.78■□□□□ 0.44
PKP2-203ENST00000546498 TAF7Q15545 349 aaPredicted RBP17.78■□□□□ 0.44
PKP2-203ENST00000546498 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
PKP2-203ENST00000546498 RGPD3A6NKT7 1758 aaPredicted RBP17.77■□□□□ 0.44
PKP2-203ENST00000546498 RGPD4Q7Z3J3 1758 aa17.77■□□□□ 0.44
PKP2-203ENST00000546498 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.44
PKP2-203ENST00000546498 SIK1P57059 783 aa17.77■□□□□ 0.44
PKP2-203ENST00000546498 THUMPD2Q9BTF0 503 aaKnown RBP17.77■□□□□ 0.44
PKP2-203ENST00000546498 PTCD1O75127 700 aaKnown RBP17.76■□□□□ 0.43
PKP2-203ENST00000546498 SLC39A6Q13433 755 aa17.76■□□□□ 0.43
PKP2-203ENST00000546498 PROM2Q8N271 834 aa17.76■□□□□ 0.43
PKP2-203ENST00000546498 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
PKP2-203ENST00000546498 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
PKP2-203ENST00000546498 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
PKP2-203ENST00000546498 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
PKP2-203ENST00000546498 NGEFQ8N5V2 710 aa17.75■□□□□ 0.43
PKP2-203ENST00000546498 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
PKP2-203ENST00000546498 SALL2Q9Y467 1007 aaPredicted RBP17.74■□□□□ 0.43
PKP2-203ENST00000546498 DLG5Q8TDM6 1919 aa17.73■□□□□ 0.43
PKP2-203ENST00000546498 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
PKP2-203ENST00000546498 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
PKP2-203ENST00000546498 LRRC4BQ9NT99 713 aa17.73■□□□□ 0.43
PKP2-203ENST00000546498 STK32BQ9NY57 414 aa17.73■□□□□ 0.43
PKP2-203ENST00000546498 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
PKP2-203ENST00000546498 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
PKP2-203ENST00000546498 KCNQ4P56696 695 aa17.72■□□□□ 0.43
PKP2-203ENST00000546498 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
PKP2-203ENST00000546498 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.43
PKP2-203ENST00000546498 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
PKP2-203ENST00000546498 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
PKP2-203ENST00000546498 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
PKP2-203ENST00000546498 RREB1Q92766 1687 aa17.7■□□□□ 0.42
PKP2-203ENST00000546498 LY75O60449 1722 aa17.69■□□□□ 0.42
PKP2-203ENST00000546498 ZNF496Q96IT1 587 aaPredicted RBP17.69■□□□□ 0.42
PKP2-203ENST00000546498 AK7Q96M32 723 aa17.69■□□□□ 0.42
PKP2-203ENST00000546498 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
PKP2-203ENST00000546498 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
PKP2-203ENST00000546498 KCNQ3O43525 872 aa17.68■□□□□ 0.42
PKP2-203ENST00000546498 GNAI1P63096 354 aa17.68■□□□□ 0.42
PKP2-203ENST00000546498 ITPK1Q13572 414 aa17.68■□□□□ 0.42
PKP2-203ENST00000546498 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
PKP2-203ENST00000546498 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
PKP2-203ENST00000546498 PAPPAQ13219 1627 aa17.68■□□□□ 0.42
PKP2-203ENST00000546498 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 NUP188Q5SRE5 1749 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 STARD3NLO95772 234 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 SLC4A9Q96Q91 983 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
PKP2-203ENST00000546498 TFCP2L1Q9NZI6 479 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
PKP2-203ENST00000546498 CHL1O00533 1208 aa17.66■□□□□ 0.42
PKP2-203ENST00000546498 SNRPA1P09661 255 aaKnown RBP17.66■□□□□ 0.42
PKP2-203ENST00000546498 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
PKP2-203ENST00000546498 WDR63Q8IWG1 891 aa17.66■□□□□ 0.42
PKP2-203ENST00000546498 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
PKP2-203ENST00000546498 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
PKP2-203ENST00000546498 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
PKP2-203ENST00000546498 IL16Q14005 1332 aa17.65■□□□□ 0.42
PKP2-203ENST00000546498 EIF4A1P60842 406 aaKnown RBP17.64■□□□□ 0.41
PKP2-203ENST00000546498 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
PKP2-203ENST00000546498 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.41
PKP2-203ENST00000546498 PSDA5PKW4 1024 aaPredicted RBP17.63■□□□□ 0.41
PKP2-203ENST00000546498 GNPATO15228 680 aa17.63■□□□□ 0.41
PKP2-203ENST00000546498 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
PKP2-203ENST00000546498 MBIPQ9NS73 344 aa17.63■□□□□ 0.41
PKP2-203ENST00000546498 C5P01031 1676 aa17.62■□□□□ 0.41
PKP2-203ENST00000546498 ZNF831Q5JPB2 1677 aa17.62■□□□□ 0.41
PKP2-203ENST00000546498 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
PKP2-203ENST00000546498 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
PKP2-203ENST00000546498 CRKLP46109 303 aaKnown RBP17.62■□□□□ 0.41
PKP2-203ENST00000546498 FLAD1Q8NFF5 587 aa17.62■□□□□ 0.41
PKP2-203ENST00000546498 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
PKP2-203ENST00000546498 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
PKP2-203ENST00000546498 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
PKP2-203ENST00000546498 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
PKP2-203ENST00000546498 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
PKP2-203ENST00000546498 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
PKP2-203ENST00000546498 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
PKP2-203ENST00000546498 MSH5O43196 834 aa17.6■□□□□ 0.41
PKP2-203ENST00000546498 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
PKP2-203ENST00000546498 PHF14O94880 888 aa17.6■□□□□ 0.41
PKP2-203ENST00000546498 SSFA2P28290 1259 aa17.6■□□□□ 0.41
PKP2-203ENST00000546498 C4BP0C0L5 1744 aa17.6■□□□□ 0.41
PKP2-203ENST00000546498 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms