RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 PTF1AQ7RTS3 328 aa24.29■■□□□ 1.48
CCDC189-212ENST00000546006 PIGBQ92521 554 aa24.29■■□□□ 1.48
CCDC189-212ENST00000546006 HNRNPUQ00839 825 aaKnown RBP eCLIP24.27■■□□□ 1.48
CCDC189-212ENST00000546006 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
CCDC189-212ENST00000546006 CALD1Q05682 793 aaKnown RBP24.25■■□□□ 1.47
CCDC189-212ENST00000546006 SIPA1L3O60292 1781 aaPredicted RBP24.25■■□□□ 1.47
CCDC189-212ENST00000546006 TAF7Q15545 349 aaPredicted RBP24.25■■□□□ 1.47
CCDC189-212ENST00000546006 ZNF521Q96K83 1311 aa24.24■■□□□ 1.47
CCDC189-212ENST00000546006 WDR63Q8IWG1 891 aa24.23■■□□□ 1.47
CCDC189-212ENST00000546006 BTAF1O14981 1849 aa24.23■■□□□ 1.47
CCDC189-212ENST00000546006 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
CCDC189-212ENST00000546006 ATG3Q9NT62 314 aa24.21■■□□□ 1.47
CCDC189-212ENST00000546006 ASAP1Q9ULH1 1129 aa24.21■■□□□ 1.47
CCDC189-212ENST00000546006 TNS1Q9HBL0 1735 aaKnown RBP24.21■■□□□ 1.47
CCDC189-212ENST00000546006 IL16Q14005 1332 aa24.21■■□□□ 1.47
CCDC189-212ENST00000546006 CCDC125Q86Z20 511 aa24.2■■□□□ 1.47
CCDC189-212ENST00000546006 BABAM1Q9NWV8 329 aa24.2■■□□□ 1.47
CCDC189-212ENST00000546006 APBA3O96018 575 aa24.2■■□□□ 1.46
CCDC189-212ENST00000546006 CFAP44Q96MT7 982 aa24.2■■□□□ 1.46
CCDC189-212ENST00000546006 IFT57Q9NWB7 429 aa24.2■■□□□ 1.46
CCDC189-212ENST00000546006 ZNF853P0CG23 659 aa24.19■■□□□ 1.46
CCDC189-212ENST00000546006 SLC39A6Q13433 755 aa24.19■■□□□ 1.46
CCDC189-212ENST00000546006 SMARCC1Q92922 1105 aaPredicted RBP24.19■■□□□ 1.46
CCDC189-212ENST00000546006 MIS18AQ9NYP9 233 aa24.19■■□□□ 1.46
CCDC189-212ENST00000546006 LAS1LQ9Y4W2 734 aaKnown RBP24.19■■□□□ 1.46
CCDC189-212ENST00000546006 PAPPAQ13219 1627 aa24.18■■□□□ 1.46
CCDC189-212ENST00000546006 CHL1O00533 1208 aa24.18■■□□□ 1.46
CCDC189-212ENST00000546006 SF3B2Q13435 895 aaKnown RBP24.18■■□□□ 1.46
CCDC189-212ENST00000546006 ZNF790Q6PG37 636 aa24.18■■□□□ 1.46
CCDC189-212ENST00000546006 TSPYL4Q9UJ04 414 aa24.18■■□□□ 1.46
CCDC189-212ENST00000546006 GNAI1P63096 354 aa24.17■■□□□ 1.46
CCDC189-212ENST00000546006 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
CCDC189-212ENST00000546006 TTC5Q8N0Z6 440 aa24.16■■□□□ 1.46
CCDC189-212ENST00000546006 ZBED9Q6R2W3 1325 aa24.16■■□□□ 1.46
CCDC189-212ENST00000546006 PLSCR1O15162 318 aa24.15■■□□□ 1.46
CCDC189-212ENST00000546006 KCNQ3O43525 872 aa24.15■■□□□ 1.46
CCDC189-212ENST00000546006 GOLGA2Q08379 1002 aa24.15■■□□□ 1.46
CCDC189-212ENST00000546006 KDM3BQ7LBC6 1761 aa24.15■■□□□ 1.46
CCDC189-212ENST00000546006 MBIPQ9NS73 344 aa24.14■■□□□ 1.45
CCDC189-212ENST00000546006 YTHDC1Q96MU7 727 aaKnown RBP24.13■■□□□ 1.45
CCDC189-212ENST00000546006 SPINK5Q9NQ38 1064 aaPredicted RBP24.13■■□□□ 1.45
CCDC189-212ENST00000546006 KCPQ6ZWJ8 1503 aa24.12■■□□□ 1.45
CCDC189-212ENST00000546006 BAG6P46379 1132 aa24.12■■□□□ 1.45
CCDC189-212ENST00000546006 UBR2Q8IWV8 1755 aa24.11■■□□□ 1.45
CCDC189-212ENST00000546006 PTCD1O75127 700 aaKnown RBP24.11■■□□□ 1.45
CCDC189-212ENST00000546006 LOC102724428A0A0B4J2F2 783 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 E9PSI1 815 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 SIK1P57059 783 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 ZNF496Q96IT1 587 aaPredicted RBP24.1■■□□□ 1.45
CCDC189-212ENST00000546006 FMNL2Q96PY5 1086 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 RBM42Q9BTD8 480 aaKnown RBP24.1■■□□□ 1.45
CCDC189-212ENST00000546006 MYH16Q9H6N6 1097 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 LY75O60449 1722 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 RGPD3A6NKT7 1758 aaPredicted RBP24.1■■□□□ 1.45
CCDC189-212ENST00000546006 RGPD4Q7Z3J3 1758 aa24.1■■□□□ 1.45
CCDC189-212ENST00000546006 EIF4A1P60842 406 aaKnown RBP24.1■■□□□ 1.45
CCDC189-212ENST00000546006 TSR2Q969E8 191 aaKnown RBP24.1■■□□□ 1.45
CCDC189-212ENST00000546006 EN1Q05925 392 aaPredicted RBP24.09■■□□□ 1.45
CCDC189-212ENST00000546006 SLFN5Q08AF3 891 aa24.09■■□□□ 1.45
CCDC189-212ENST00000546006 DEFB132Q7Z7B7 95 aa24.09■■□□□ 1.45
CCDC189-212ENST00000546006 CDCA7LQ96GN5 454 aa24.09■■□□□ 1.45
CCDC189-212ENST00000546006 CAMKK2Q96RR4 588 aa24.09■■□□□ 1.45
CCDC189-212ENST00000546006 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.45
CCDC189-212ENST00000546006 SLC4A9Q96Q91 983 aa24.08■■□□□ 1.45
CCDC189-212ENST00000546006 HEG1Q9ULI3 1381 aa24.07■■□□□ 1.44
CCDC189-212ENST00000546006 SLC27A3Q5K4L6 730 aa24.07■■□□□ 1.44
CCDC189-212ENST00000546006 VSIG10Q8N0Z9 540 aa24.07■■□□□ 1.44
CCDC189-212ENST00000546006 CCNL1Q9UK58 526 aaPredicted RBP24.07■■□□□ 1.44
CCDC189-212ENST00000546006 TXNRD1Q16881 649 aa24.06■■□□□ 1.44
CCDC189-212ENST00000546006 PROM2Q8N271 834 aa24.06■■□□□ 1.44
CCDC189-212ENST00000546006 ATP6V1AP38606 617 aa24.05■■□□□ 1.44
CCDC189-212ENST00000546006 EZH2Q15910 746 aaKnown RBP24.05■■□□□ 1.44
CCDC189-212ENST00000546006 TRMT2AQ8IZ69 625 aaKnown RBP24.05■■□□□ 1.44
CCDC189-212ENST00000546006 ZNF831Q5JPB2 1677 aa24.04■■□□□ 1.44
CCDC189-212ENST00000546006 SNRPA1P09661 255 aaKnown RBP24.04■■□□□ 1.44
CCDC189-212ENST00000546006 LRRC4BQ9NT99 713 aa24.04■■□□□ 1.44
CCDC189-212ENST00000546006 GIGYF1O75420 1035 aaPredicted RBP24.03■■□□□ 1.44
CCDC189-212ENST00000546006 KCNQ4P56696 695 aa24.03■■□□□ 1.44
CCDC189-212ENST00000546006 ITPK1Q13572 414 aa24.03■■□□□ 1.44
CCDC189-212ENST00000546006 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
CCDC189-212ENST00000546006 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.44
CCDC189-212ENST00000546006 DUSP27Q5VZP5 1158 aa24.01■■□□□ 1.43
CCDC189-212ENST00000546006 DNAJC10Q8IXB1 793 aa24.01■■□□□ 1.43
CCDC189-212ENST00000546006 PRAMEF22A3QJZ6 481 aa24■■□□□ 1.43
CCDC189-212ENST00000546006 C8orf58Q8NAV2 365 aa24■■□□□ 1.43
CCDC189-212ENST00000546006 TEX13AQ9BXU3 409 aaPredicted RBP24■■□□□ 1.43
CCDC189-212ENST00000546006 TJP1Q07157 1748 aa24■■□□□ 1.43
CCDC189-212ENST00000546006 HMGB2P26583 209 aaKnown RBP23.99■■□□□ 1.43
CCDC189-212ENST00000546006 EXOSC9Q06265 439 aaKnown RBP23.99■■□□□ 1.43
CCDC189-212ENST00000546006 RREB1Q92766 1687 aa23.99■■□□□ 1.43
CCDC189-212ENST00000546006 HOXB7P09629 217 aa23.98■■□□□ 1.43
CCDC189-212ENST00000546006 LINC00116Q8NCU8 138 aa23.98■■□□□ 1.43
CCDC189-212ENST00000546006 C5P01031 1676 aa23.97■■□□□ 1.43
CCDC189-212ENST00000546006 ELL2O00472 640 aaPredicted RBP23.97■■□□□ 1.43
CCDC189-212ENST00000546006 TSPYL6Q8N831 410 aa23.97■■□□□ 1.43
CCDC189-212ENST00000546006 USP16Q9Y5T5 823 aa23.97■■□□□ 1.43
CCDC189-212ENST00000546006 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
CCDC189-212ENST00000546006 STARD3NLO95772 234 aa23.96■■□□□ 1.43
CCDC189-212ENST00000546006 CYP19A1P11511 503 aaPredicted RBP23.96■■□□□ 1.43
CCDC189-212ENST00000546006 TAF1LQ8IZX4 1826 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms