RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
CDCA3-210ENST00000545368 IL16Q14005 1332 aa16.96■□□□□ 0.3
CDCA3-210ENST00000545368 ZNF521Q96K83 1311 aa16.96■□□□□ 0.3
CDCA3-210ENST00000545368 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
CDCA3-210ENST00000545368 KCNQ2O43526 872 aa16.95■□□□□ 0.3
CDCA3-210ENST00000545368 TAF7Q15545 349 aaPredicted RBP16.95■□□□□ 0.3
CDCA3-210ENST00000545368 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
CDCA3-210ENST00000545368 PAPPAQ13219 1627 aa16.95■□□□□ 0.3
CDCA3-210ENST00000545368 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
CDCA3-210ENST00000545368 TRIM37O94972 964 aa16.94■□□□□ 0.3
CDCA3-210ENST00000545368 GNAI1P63096 354 aa16.94■□□□□ 0.3
CDCA3-210ENST00000545368 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
CDCA3-210ENST00000545368 PIGBQ92521 554 aa16.94■□□□□ 0.3
CDCA3-210ENST00000545368 BCL11BQ9C0K0 894 aaPredicted RBP16.94■□□□□ 0.3
CDCA3-210ENST00000545368 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
CDCA3-210ENST00000545368 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
CDCA3-210ENST00000545368 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
CDCA3-210ENST00000545368 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
CDCA3-210ENST00000545368 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
CDCA3-210ENST00000545368 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
CDCA3-210ENST00000545368 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
CDCA3-210ENST00000545368 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
CDCA3-210ENST00000545368 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
CDCA3-210ENST00000545368 E9PSI1 815 aa16.9■□□□□ 0.3
CDCA3-210ENST00000545368 CHL1O00533 1208 aa16.9■□□□□ 0.3
CDCA3-210ENST00000545368 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
CDCA3-210ENST00000545368 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
CDCA3-210ENST00000545368 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
CDCA3-210ENST00000545368 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
CDCA3-210ENST00000545368 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
CDCA3-210ENST00000545368 MIS18AQ9NYP9 233 aa16.89■□□□□ 0.29
CDCA3-210ENST00000545368 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
CDCA3-210ENST00000545368 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
CDCA3-210ENST00000545368 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
CDCA3-210ENST00000545368 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
CDCA3-210ENST00000545368 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
CDCA3-210ENST00000545368 ATG3Q9NT62 314 aa16.88■□□□□ 0.29
CDCA3-210ENST00000545368 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
CDCA3-210ENST00000545368 APBA3O96018 575 aa16.87■□□□□ 0.29
CDCA3-210ENST00000545368 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
CDCA3-210ENST00000545368 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
CDCA3-210ENST00000545368 LY75O60449 1722 aa16.87■□□□□ 0.29
CDCA3-210ENST00000545368 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
CDCA3-210ENST00000545368 ILDR2Q71H61 639 aa16.86■□□□□ 0.29
CDCA3-210ENST00000545368 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
CDCA3-210ENST00000545368 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
CDCA3-210ENST00000545368 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
CDCA3-210ENST00000545368 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
CDCA3-210ENST00000545368 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
CDCA3-210ENST00000545368 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
CDCA3-210ENST00000545368 EP400Q96L91 3159 aa16.85■□□□□ 0.29
CDCA3-210ENST00000545368 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
CDCA3-210ENST00000545368 KCNQ3O43525 872 aa16.84■□□□□ 0.29
CDCA3-210ENST00000545368 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
CDCA3-210ENST00000545368 LAMB4A4D0S4 1761 aa16.83■□□□□ 0.28
CDCA3-210ENST00000545368 PLSCR1O15162 318 aa16.83■□□□□ 0.28
CDCA3-210ENST00000545368 BAG6P46379 1132 aa16.83■□□□□ 0.28
CDCA3-210ENST00000545368 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-210ENST00000545368 CICQ96RK0 1608 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-210ENST00000545368 HEG1Q9ULI3 1381 aa16.83■□□□□ 0.28
CDCA3-210ENST00000545368 LOC102724428A0A0B4J2F2 783 aa16.82■□□□□ 0.28
CDCA3-210ENST00000545368 SIK1P57059 783 aa16.82■□□□□ 0.28
CDCA3-210ENST00000545368 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
CDCA3-210ENST00000545368 TJP1Q07157 1748 aa16.82■□□□□ 0.28
CDCA3-210ENST00000545368 C5P01031 1676 aa16.81■□□□□ 0.28
CDCA3-210ENST00000545368 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
CDCA3-210ENST00000545368 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
CDCA3-210ENST00000545368 TRMT2AQ8IZ69 625 aaKnown RBP16.81■□□□□ 0.28
CDCA3-210ENST00000545368 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
CDCA3-210ENST00000545368 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
CDCA3-210ENST00000545368 HMGB2P26583 209 aaKnown RBP16.8■□□□□ 0.28
CDCA3-210ENST00000545368 SLC27A3Q5K4L6 730 aa16.8■□□□□ 0.28
CDCA3-210ENST00000545368 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDCA3-210ENST00000545368 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-210ENST00000545368 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-210ENST00000545368 HOXB7P09629 217 aa16.79■□□□□ 0.28
CDCA3-210ENST00000545368 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
CDCA3-210ENST00000545368 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-210ENST00000545368 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
CDCA3-210ENST00000545368 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
CDCA3-210ENST00000545368 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
CDCA3-210ENST00000545368 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-210ENST00000545368 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
CDCA3-210ENST00000545368 COL5A3P25940 1745 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-210ENST00000545368 RREB1Q92766 1687 aa16.78■□□□□ 0.28
CDCA3-210ENST00000545368 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-210ENST00000545368 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
CDCA3-210ENST00000545368 SLC4A9Q96Q91 983 aa16.77■□□□□ 0.28
CDCA3-210ENST00000545368 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
CDCA3-210ENST00000545368 STARD3NLO95772 234 aa16.76■□□□□ 0.27
CDCA3-210ENST00000545368 DEFB132Q7Z7B7 95 aa16.76■□□□□ 0.27
CDCA3-210ENST00000545368 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
CDCA3-210ENST00000545368 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
CDCA3-210ENST00000545368 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
CDCA3-210ENST00000545368 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
CDCA3-210ENST00000545368 ITPK1Q13572 414 aa16.75■□□□□ 0.27
CDCA3-210ENST00000545368 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
CDCA3-210ENST00000545368 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
CDCA3-210ENST00000545368 TSPYL6Q8N831 410 aa16.75■□□□□ 0.27
CDCA3-210ENST00000545368 C4BP0C0L5 1744 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms