RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
TSEN54-203ENST00000545228 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
TSEN54-203ENST00000545228 ITGB4P16144 1822 aa18.25■□□□□ 0.51
TSEN54-203ENST00000545228 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
TSEN54-203ENST00000545228 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
TSEN54-203ENST00000545228 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
TSEN54-203ENST00000545228 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
TSEN54-203ENST00000545228 MIER1Q8N108 512 aa18.24■□□□□ 0.51
TSEN54-203ENST00000545228 SLC16A10Q8TF71 515 aa18.24■□□□□ 0.51
TSEN54-203ENST00000545228 CYP27B1O15528 508 aa18.23■□□□□ 0.51
TSEN54-203ENST00000545228 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
TSEN54-203ENST00000545228 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
TSEN54-203ENST00000545228 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
TSEN54-203ENST00000545228 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
TSEN54-203ENST00000545228 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
TSEN54-203ENST00000545228 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
TSEN54-203ENST00000545228 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
TSEN54-203ENST00000545228 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
TSEN54-203ENST00000545228 HMGB2P26583 209 aaKnown RBP18.21■□□□□ 0.51
TSEN54-203ENST00000545228 POLD1P28340 1107 aa18.21■□□□□ 0.51
TSEN54-203ENST00000545228 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
TSEN54-203ENST00000545228 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
TSEN54-203ENST00000545228 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
TSEN54-203ENST00000545228 KCNQ4P56696 695 aa18.2■□□□□ 0.5
TSEN54-203ENST00000545228 ZNF784Q8NCA9 323 aaPredicted RBP18.2■□□□□ 0.5
TSEN54-203ENST00000545228 QSER1Q2KHR3 1735 aa18.2■□□□□ 0.5
TSEN54-203ENST00000545228 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
TSEN54-203ENST00000545228 PHACTR3Q96KR7 559 aa18.19■□□□□ 0.5
TSEN54-203ENST00000545228 CALD1Q05682 793 aaKnown RBP18.18■□□□□ 0.5
TSEN54-203ENST00000545228 TEFQ10587 303 aa18.18■□□□□ 0.5
TSEN54-203ENST00000545228 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
TSEN54-203ENST00000545228 KLHL34Q8N239 644 aa18.18■□□□□ 0.5
TSEN54-203ENST00000545228 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
TSEN54-203ENST00000545228 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
TSEN54-203ENST00000545228 MRC1P22897 1456 aa18.18■□□□□ 0.5
TSEN54-203ENST00000545228 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
TSEN54-203ENST00000545228 CABP4P57796 275 aa18.17■□□□□ 0.5
TSEN54-203ENST00000545228 LY75O60449 1722 aa18.17■□□□□ 0.5
TSEN54-203ENST00000545228 RIPK4P57078 832 aa18.16■□□□□ 0.5
TSEN54-203ENST00000545228 GPR162Q16538 588 aa18.16■□□□□ 0.5
TSEN54-203ENST00000545228 SIPA1L3O60292 1781 aaPredicted RBP18.16■□□□□ 0.5
TSEN54-203ENST00000545228 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
TSEN54-203ENST00000545228 RNMTO43148 476 aaKnown RBP18.15■□□□□ 0.5
TSEN54-203ENST00000545228 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
TSEN54-203ENST00000545228 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
TSEN54-203ENST00000545228 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
TSEN54-203ENST00000545228 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
TSEN54-203ENST00000545228 APAF1O14727 1248 aa18.13■□□□□ 0.49
TSEN54-203ENST00000545228 CHD4Q14839 1912 aa18.13■□□□□ 0.49
TSEN54-203ENST00000545228 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
TSEN54-203ENST00000545228 MSH5O43196 834 aa18.12■□□□□ 0.49
TSEN54-203ENST00000545228 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
TSEN54-203ENST00000545228 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
TSEN54-203ENST00000545228 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
TSEN54-203ENST00000545228 PELP1Q8IZL8 1130 aaKnown RBP18.11■□□□□ 0.49
TSEN54-203ENST00000545228 COL23A1Q86Y22 540 aaPredicted RBP18.1■□□□□ 0.49
TSEN54-203ENST00000545228 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
TSEN54-203ENST00000545228 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
TSEN54-203ENST00000545228 NLGN2Q8NFZ4 835 aa18.09■□□□□ 0.49
TSEN54-203ENST00000545228 BABAM1Q9NWV8 329 aa18.09■□□□□ 0.49
TSEN54-203ENST00000545228 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
TSEN54-203ENST00000545228 RRP7AQ9Y3A4 280 aaKnown RBP18.08■□□□□ 0.48
TSEN54-203ENST00000545228 KDM3BQ7LBC6 1761 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
TSEN54-203ENST00000545228 MCM10Q7L590 875 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 NFATC2IPQ8NCF5 419 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 IL17REQ8NFR9 667 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 LGR6Q9HBX8 967 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 UTRNP46939 3433 aa18.07■□□□□ 0.48
TSEN54-203ENST00000545228 C5P01031 1676 aa18.06■□□□□ 0.48
TSEN54-203ENST00000545228 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
TSEN54-203ENST00000545228 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
TSEN54-203ENST00000545228 PIGBQ92521 554 aa18.06■□□□□ 0.48
TSEN54-203ENST00000545228 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
TSEN54-203ENST00000545228 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
TSEN54-203ENST00000545228 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
TSEN54-203ENST00000545228 IL16Q14005 1332 aa18.03■□□□□ 0.48
TSEN54-203ENST00000545228 GRIN3BO60391 1043 aa18.03■□□□□ 0.48
TSEN54-203ENST00000545228 GNAI1P63096 354 aa18.03■□□□□ 0.48
TSEN54-203ENST00000545228 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
TSEN54-203ENST00000545228 WDR63Q8IWG1 891 aa18.03■□□□□ 0.48
TSEN54-203ENST00000545228 TRIM35Q9UPQ4 493 aa18.03■□□□□ 0.48
TSEN54-203ENST00000545228 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.48
TSEN54-203ENST00000545228 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
TSEN54-203ENST00000545228 IFT57Q9NWB7 429 aa18.02■□□□□ 0.48
TSEN54-203ENST00000545228 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
TSEN54-203ENST00000545228 YBX3P16989 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
TSEN54-203ENST00000545228 ZNF790Q6PG37 636 aa18.01■□□□□ 0.47
TSEN54-203ENST00000545228 AK7Q96M32 723 aa18.01■□□□□ 0.47
TSEN54-203ENST00000545228 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
TSEN54-203ENST00000545228 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
TSEN54-203ENST00000545228 TSPYL4Q9UJ04 414 aa18.01■□□□□ 0.47
TSEN54-203ENST00000545228 LAMB4A4D0S4 1761 aa18■□□□□ 0.47
TSEN54-203ENST00000545228 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
TSEN54-203ENST00000545228 CFAP44Q96MT7 982 aa18■□□□□ 0.47
TSEN54-203ENST00000545228 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
TSEN54-203ENST00000545228 ATG3Q9NT62 314 aa18■□□□□ 0.47
TSEN54-203ENST00000545228 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
TSEN54-203ENST00000545228 C4BP0C0L5 1744 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms