RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 NEFMP07197 916 aa14.99□□□□□ -0.01
SRRM4-203ENST00000545224 DCTN1Q14203 1278 aa14.99□□□□□ -0.01
SRRM4-203ENST00000545224 CCDC27Q2M243 656 aa14.99□□□□□ -0.01
SRRM4-203ENST00000545224 MRC1P22897 1456 aa14.99□□□□□ -0.01
SRRM4-203ENST00000545224 VIRMAQ69YN4 1812 aaKnown RBP14.99□□□□□ -0.01
SRRM4-203ENST00000545224 MCM10Q7L590 875 aa14.98□□□□□ -0.01
SRRM4-203ENST00000545224 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
SRRM4-203ENST00000545224 ITGB4P16144 1822 aa14.97□□□□□ -0.01
SRRM4-203ENST00000545224 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
SRRM4-203ENST00000545224 PRIM1P49642 420 aaKnown RBP14.97□□□□□ -0.01
SRRM4-203ENST00000545224 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
SRRM4-203ENST00000545224 ACSBG1Q96GR2 724 aa14.97□□□□□ -0.01
SRRM4-203ENST00000545224 NHSQ6T4R5 1651 aa14.97□□□□□ -0.01
SRRM4-203ENST00000545224 ZNF521Q96K83 1311 aa14.96□□□□□ -0.01
SRRM4-203ENST00000545224 PIGBQ92521 554 aa14.96□□□□□ -0.01
SRRM4-203ENST00000545224 THUMPD2Q9BTF0 503 aaKnown RBP14.96□□□□□ -0.01
SRRM4-203ENST00000545224 BCL11BQ9C0K0 894 aaPredicted RBP14.96□□□□□ -0.01
SRRM4-203ENST00000545224 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
SRRM4-203ENST00000545224 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.02
SRRM4-203ENST00000545224 WWC1Q8IX03 1113 aa14.95□□□□□ -0.02
SRRM4-203ENST00000545224 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
SRRM4-203ENST00000545224 NFATC2IPQ8NCF5 419 aa14.95□□□□□ -0.02
SRRM4-203ENST00000545224 CASZ1Q86V15 1759 aa14.94□□□□□ -0.02
SRRM4-203ENST00000545224 RTF1Q92541 710 aaKnown RBP14.94□□□□□ -0.02
SRRM4-203ENST00000545224 ZNF853P0CG23 659 aa14.93□□□□□ -0.02
SRRM4-203ENST00000545224 LMOD3Q0VAK6 560 aa14.93□□□□□ -0.02
SRRM4-203ENST00000545224 CABP4P57796 275 aa14.92□□□□□ -0.02
SRRM4-203ENST00000545224 TAF7Q15545 349 aaPredicted RBP14.91□□□□□ -0.02
SRRM4-203ENST00000545224 ATG3Q9NT62 314 aa14.91□□□□□ -0.02
SRRM4-203ENST00000545224 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
SRRM4-203ENST00000545224 SALL2Q9Y467 1007 aaPredicted RBP14.91□□□□□ -0.02
SRRM4-203ENST00000545224 BTAF1O14981 1849 aa14.91□□□□□ -0.02
SRRM4-203ENST00000545224 CHL1O00533 1208 aa14.9□□□□□ -0.02
SRRM4-203ENST00000545224 WDR63Q8IWG1 891 aa14.9□□□□□ -0.02
SRRM4-203ENST00000545224 PROM2Q8N271 834 aa14.9□□□□□ -0.02
SRRM4-203ENST00000545224 ZNF784Q8NCA9 323 aaPredicted RBP14.9□□□□□ -0.02
SRRM4-203ENST00000545224 ANO8Q9HCE9 1232 aaPredicted RBP14.9□□□□□ -0.02
SRRM4-203ENST00000545224 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
SRRM4-203ENST00000545224 ASAP1Q9ULH1 1129 aa14.9□□□□□ -0.02
SRRM4-203ENST00000545224 PAPPAQ13219 1627 aa14.9□□□□□ -0.02
SRRM4-203ENST00000545224 KCNQ3O43525 872 aa14.89□□□□□ -0.03
SRRM4-203ENST00000545224 ZBTB7AO95365 584 aa14.89□□□□□ -0.03
SRRM4-203ENST00000545224 TEFQ10587 303 aa14.89□□□□□ -0.03
SRRM4-203ENST00000545224 SYTL4Q96C24 671 aaPredicted RBP14.89□□□□□ -0.03
SRRM4-203ENST00000545224 BABAM1Q9NWV8 329 aa14.89□□□□□ -0.03
SRRM4-203ENST00000545224 STK32BQ9NY57 414 aa14.89□□□□□ -0.03
SRRM4-203ENST00000545224 PTGER2P43116 358 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 SLC39A6Q13433 755 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 CFAP44Q96MT7 982 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 SLC4A9Q96Q91 983 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 SYT17Q9BSW7 474 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 MIS18AQ9NYP9 233 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
SRRM4-203ENST00000545224 IL16Q14005 1332 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
SRRM4-203ENST00000545224 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
SRRM4-203ENST00000545224 BTBD11A6QL63 1104 aa14.87□□□□□ -0.03
SRRM4-203ENST00000545224 SLC15A2Q16348 729 aa14.87□□□□□ -0.03
SRRM4-203ENST00000545224 ZNF790Q6PG37 636 aa14.87□□□□□ -0.03
SRRM4-203ENST00000545224 PDGFDQ9GZP0 370 aaPredicted RBP14.87□□□□□ -0.03
SRRM4-203ENST00000545224 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
SRRM4-203ENST00000545224 UBR2Q8IWV8 1755 aa14.86□□□□□ -0.03
SRRM4-203ENST00000545224 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRRM4-203ENST00000545224 TXNRD1Q16881 649 aa14.86□□□□□ -0.03
SRRM4-203ENST00000545224 TRMT2AQ8IZ69 625 aaKnown RBP14.86□□□□□ -0.03
SRRM4-203ENST00000545224 MTFR1LQ9H019 292 aa14.86□□□□□ -0.03
SRRM4-203ENST00000545224 IFT57Q9NWB7 429 aa14.86□□□□□ -0.03
SRRM4-203ENST00000545224 LY75O60449 1722 aa14.86□□□□□ -0.03
SRRM4-203ENST00000545224 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
SRRM4-203ENST00000545224 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
SRRM4-203ENST00000545224 EIF4A1P60842 406 aaKnown RBP14.84□□□□□ -0.03
SRRM4-203ENST00000545224 GNAI1P63096 354 aa14.84□□□□□ -0.03
SRRM4-203ENST00000545224 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
SRRM4-203ENST00000545224 ZNF496Q96IT1 587 aaPredicted RBP14.84□□□□□ -0.03
SRRM4-203ENST00000545224 FHDC1Q9C0D6 1143 aaPredicted RBP14.84□□□□□ -0.03
SRRM4-203ENST00000545224 ZBED9Q6R2W3 1325 aa14.84□□□□□ -0.03
SRRM4-203ENST00000545224 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.04
SRRM4-203ENST00000545224 SLFN5Q08AF3 891 aa14.83□□□□□ -0.04
SRRM4-203ENST00000545224 CDCA7LQ96GN5 454 aa14.83□□□□□ -0.04
SRRM4-203ENST00000545224 LRRC4BQ9NT99 713 aa14.83□□□□□ -0.04
SRRM4-203ENST00000545224 ZNF831Q5JPB2 1677 aa14.83□□□□□ -0.04
SRRM4-203ENST00000545224 CICQ96RK0 1608 aaPredicted RBP14.82□□□□□ -0.04
SRRM4-203ENST00000545224 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
SRRM4-203ENST00000545224 SIK1P57059 783 aa14.82□□□□□ -0.04
SRRM4-203ENST00000545224 C1QTNF8P60827 252 aa14.82□□□□□ -0.04
SRRM4-203ENST00000545224 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
SRRM4-203ENST00000545224 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
SRRM4-203ENST00000545224 ITPK1Q13572 414 aa14.81□□□□□ -0.04
SRRM4-203ENST00000545224 VSIG10Q8N0Z9 540 aa14.81□□□□□ -0.04
SRRM4-203ENST00000545224 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
SRRM4-203ENST00000545224 UTRNP46939 3433 aa14.81□□□□□ -0.04
SRRM4-203ENST00000545224 PRAMEF22A3QJZ6 481 aa14.8□□□□□ -0.04
SRRM4-203ENST00000545224 PTCD1O75127 700 aaKnown RBP14.8□□□□□ -0.04
SRRM4-203ENST00000545224 KRT24Q2M2I5 525 aa14.8□□□□□ -0.04
SRRM4-203ENST00000545224 TSR2Q969E8 191 aaKnown RBP14.8□□□□□ -0.04
SRRM4-203ENST00000545224 ARXQ96QS3 562 aa14.8□□□□□ -0.04
SRRM4-203ENST00000545224 LAS1LQ9Y4W2 734 aaKnown RBP14.8□□□□□ -0.04
SRRM4-203ENST00000545224 FANCIQ9NVI1 1328 aa14.8□□□□□ -0.04
SRRM4-203ENST00000545224 GIGYF1O75420 1035 aaPredicted RBP14.79□□□□□ -0.04
SRRM4-203ENST00000545224 KCNQ4P56696 695 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms