RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 RETREG3Q86VR2 466 aa9.26□□□□□ -0.93
CPSF7-222ENST00000544585 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
CPSF7-222ENST00000544585 CHIC2Q9UKJ5 165 aa9.26□□□□□ -0.93
CPSF7-222ENST00000544585 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-222ENST00000544585 ANKRD30AQ9BXX3 1397 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 PLEKHG1Q9ULL1 1385 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 POTEB2H3BUK9 544 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 SAMD7Q7Z3H4 446 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 LRRC59Q96AG4 307 aaKnown RBP9.25□□□□□ -0.93
CPSF7-222ENST00000544585 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
CPSF7-222ENST00000544585 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
CPSF7-222ENST00000544585 ABCC5O15440 1437 aa9.24□□□□□ -0.93
CPSF7-222ENST00000544585 NOS1P29475 1434 aa9.24□□□□□ -0.93
CPSF7-222ENST00000544585 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-222ENST00000544585 RBM25P49756 843 aaKnown RBP9.24□□□□□ -0.93
CPSF7-222ENST00000544585 RBM6P78332 1123 aaKnown RBP9.24□□□□□ -0.93
CPSF7-222ENST00000544585 Q3C1V9 767 aa9.24□□□□□ -0.93
CPSF7-222ENST00000544585 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
CPSF7-222ENST00000544585 IVNS1ABPQ9Y6Y0 642 aa9.24□□□□□ -0.93
CPSF7-222ENST00000544585 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
CPSF7-222ENST00000544585 PIK3C2BO00750 1634 aa9.23□□□□□ -0.93
CPSF7-222ENST00000544585 LMTK2Q8IWU2 1503 aa9.23□□□□□ -0.93
CPSF7-222ENST00000544585 ATP9BO43861 1147 aa9.23□□□□□ -0.93
CPSF7-222ENST00000544585 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
CPSF7-222ENST00000544585 POTEHQ6S545 545 aa9.23□□□□□ -0.93
CPSF7-222ENST00000544585 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
CPSF7-222ENST00000544585 KDM5AP29375 1690 aaKnown RBP9.23□□□□□ -0.93
CPSF7-222ENST00000544585 CEP152O94986 1710 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 NR1H3Q13133 447 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 BRINP3Q76B58 766 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 NGLY1Q96IV0 654 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 AFF2P51816 1311 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
CPSF7-222ENST00000544585 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.93
CPSF7-222ENST00000544585 TMEM88BA6NKF7 163 aa9.21□□□□□ -0.94
CPSF7-222ENST00000544585 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
CPSF7-222ENST00000544585 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.94
CPSF7-222ENST00000544585 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
CPSF7-222ENST00000544585 NWD1Q149M9 1564 aa9.2□□□□□ -0.94
CPSF7-222ENST00000544585 MORN1Q5T089 497 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 LYPD8Q6UX82 237 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 SND1Q7KZF4 910 aaKnown RBP eCLIP9.19□□□□□ -0.94
CPSF7-222ENST00000544585 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 DAPK1P53355 1430 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 RPRD2Q5VT52 1461 aaKnown RBP9.19□□□□□ -0.94
CPSF7-222ENST00000544585 LRP6O75581 1613 aa9.19□□□□□ -0.94
CPSF7-222ENST00000544585 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
CPSF7-222ENST00000544585 ZBBXA8MT70 800 aa9.18□□□□□ -0.94
CPSF7-222ENST00000544585 ACTN4O43707 911 aaKnown RBP9.18□□□□□ -0.94
CPSF7-222ENST00000544585 ERBB3P21860 1342 aa9.18□□□□□ -0.94
CPSF7-222ENST00000544585 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
CPSF7-222ENST00000544585 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
CPSF7-222ENST00000544585 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
CPSF7-222ENST00000544585 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
CPSF7-222ENST00000544585 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
CPSF7-222ENST00000544585 COL16A1Q07092 1604 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-222ENST00000544585 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
CPSF7-222ENST00000544585 FBXO45P0C2W1 286 aa9.17□□□□□ -0.94
CPSF7-222ENST00000544585 ZNF428Q96B54 188 aa9.17□□□□□ -0.94
CPSF7-222ENST00000544585 PRR14Q9BWN1 585 aa9.17□□□□□ -0.94
CPSF7-222ENST00000544585 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
CPSF7-222ENST00000544585 ADGRB3O60242 1522 aa9.16□□□□□ -0.94
CPSF7-222ENST00000544585 E9PSI1 815 aa9.16□□□□□ -0.94
CPSF7-222ENST00000544585 ELOAQ14241 798 aaKnown RBP9.16□□□□□ -0.94
CPSF7-222ENST00000544585 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
CPSF7-222ENST00000544585 NFATC2IPQ8NCF5 419 aa9.16□□□□□ -0.94
CPSF7-222ENST00000544585 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
CPSF7-222ENST00000544585 FKBPLQ9UIM3 349 aa9.16□□□□□ -0.94
CPSF7-222ENST00000544585 AHDC1Q5TGY3 1603 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-222ENST00000544585 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
CPSF7-222ENST00000544585 ANKRD50Q9ULJ7 1429 aa9.15□□□□□ -0.94
CPSF7-222ENST00000544585 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
CPSF7-222ENST00000544585 SKIP12755 728 aa9.15□□□□□ -0.94
CPSF7-222ENST00000544585 PBX2P40425 430 aa9.15□□□□□ -0.94
CPSF7-222ENST00000544585 USB1Q9BQ65 265 aaKnown RBP9.15□□□□□ -0.94
CPSF7-222ENST00000544585 TRPC5Q9UL62 973 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-222ENST00000544585 DCCP43146 1447 aa9.14□□□□□ -0.95
CPSF7-222ENST00000544585 ATAD2Q6PL18 1390 aa9.14□□□□□ -0.95
CPSF7-222ENST00000544585 ADAMTS2O95450 1211 aa9.14□□□□□ -0.95
CPSF7-222ENST00000544585 FAM50AQ14320 339 aaKnown RBP9.14□□□□□ -0.95
CPSF7-222ENST00000544585 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
CPSF7-222ENST00000544585 LRCH3Q96II8 777 aa9.14□□□□□ -0.95
CPSF7-222ENST00000544585 USP21Q9UK80 565 aa9.14□□□□□ -0.95
CPSF7-222ENST00000544585 GNEQ9Y223 722 aaKnown RBP9.14□□□□□ -0.95
CPSF7-222ENST00000544585 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
CPSF7-222ENST00000544585 USP17L3A6NCW0 530 aa9.13□□□□□ -0.95
CPSF7-222ENST00000544585 USP17L4A6NCW7 530 aa9.13□□□□□ -0.95
CPSF7-222ENST00000544585 PIK3CDO00329 1044 aa9.13□□□□□ -0.95
CPSF7-222ENST00000544585 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
CPSF7-222ENST00000544585 USP17L1Q7RTZ2 530 aa9.13□□□□□ -0.95
CPSF7-222ENST00000544585 CCER1Q8TC90 406 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms