RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.33□□□□□ -0.44
TCF4-209ENST00000544241 CAVIN2O95810 425 aa12.33□□□□□ -0.44
TCF4-209ENST00000544241 PTGS1P23219 599 aa12.33□□□□□ -0.44
TCF4-209ENST00000544241 LMOD3Q0VAK6 560 aa12.33□□□□□ -0.44
TCF4-209ENST00000544241 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
TCF4-209ENST00000544241 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
TCF4-209ENST00000544241 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
TCF4-209ENST00000544241 TWISTNBQ3B726 338 aaPredicted RBP12.32□□□□□ -0.44
TCF4-209ENST00000544241 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 STX6O43752 255 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
TCF4-209ENST00000544241 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
TCF4-209ENST00000544241 GIMAP6Q6P9H5 292 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
TCF4-209ENST00000544241 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
TCF4-209ENST00000544241 CYP2C19P33261 490 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
TCF4-209ENST00000544241 ERICH4A6NGS2 130 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 F13A1P00488 732 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 KMT5BQ4FZB7 885 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 ZSCAN25Q6NSZ9 544 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 KIF1BPQ96EK5 621 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 ANO2Q9NQ90 1003 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
TCF4-209ENST00000544241 PDE1AP54750 535 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 PTPN14Q15678 1187 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
TCF4-209ENST00000544241 PNPLA6Q8IY17 1366 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 TRIM5Q9C035 493 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
TCF4-209ENST00000544241 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 FANCAO15360 1455 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 FIBPO43427 364 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 CDC25BP30305 580 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 TPM4P67936 248 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 GPS2Q13227 327 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 YY1AP1Q9H869 796 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 ABCA9Q8IUA7 1624 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 PLCH2O75038 1416 aa12.29□□□□□ -0.44
TCF4-209ENST00000544241 AP5Z1O43299 807 aa12.28□□□□□ -0.44
TCF4-209ENST00000544241 SLU7O95391 586 aaKnown RBP12.28□□□□□ -0.44
TCF4-209ENST00000544241 TUBB4AP04350 444 aa12.28□□□□□ -0.44
TCF4-209ENST00000544241 NOL8Q76FK4 1167 aaKnown RBP12.28□□□□□ -0.44
TCF4-209ENST00000544241 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
TCF4-209ENST00000544241 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
TCF4-209ENST00000544241 TERF2IPQ9NYB0 399 aa12.28□□□□□ -0.44
TCF4-209ENST00000544241 PLA2G4DQ86XP0 818 aa12.28□□□□□ -0.44
TCF4-209ENST00000544241 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
TCF4-209ENST00000544241 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
TCF4-209ENST00000544241 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
TCF4-209ENST00000544241 CAPN2P17655 700 aa12.27□□□□□ -0.44
TCF4-209ENST00000544241 SYT1P21579 422 aa12.27□□□□□ -0.44
TCF4-209ENST00000544241 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.44
TCF4-209ENST00000544241 CLIP2Q9UDT6 1046 aa12.27□□□□□ -0.44
TCF4-209ENST00000544241 ABCC1P33527 1531 aa12.27□□□□□ -0.44
TCF4-209ENST00000544241 ELP1O95163 1332 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 PTPRCP08575 1304 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 ZNF75DP51815 510 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 TYRO3Q06418 890 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 MUM1L1Q5H9M0 696 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 FBXO38Q6PIJ6 1188 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 MBIPQ9NS73 344 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
TCF4-209ENST00000544241 LIMCH1Q9UPQ0 1083 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.45
TCF4-209ENST00000544241 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
TCF4-209ENST00000544241 RBM6P78332 1123 aaKnown RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 FEZ2Q9UHY8 353 aaPredicted RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 V9GYY5 206 aaPredicted RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 LRRC7Q96NW7 1537 aa12.26□□□□□ -0.45
TCF4-209ENST00000544241 HNRNPH2P55795 449 aaKnown RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 DHX8Q14562 1220 aaKnown RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 TDRD7Q8NHU6 1098 aaKnown RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 RASSF4Q9H2L5 321 aa12.26□□□□□ -0.45
TCF4-209ENST00000544241 DDX19AQ9NUU7 478 aaKnown RBP12.26□□□□□ -0.45
TCF4-209ENST00000544241 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
TCF4-209ENST00000544241 ADGRB1O14514 1584 aa12.25□□□□□ -0.45
TCF4-209ENST00000544241 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
TCF4-209ENST00000544241 CHMLP26374 656 aa12.25□□□□□ -0.45
TCF4-209ENST00000544241 HSPA4P34932 840 aa12.25□□□□□ -0.45
TCF4-209ENST00000544241 KRT85P78386 507 aa12.25□□□□□ -0.45
TCF4-209ENST00000544241 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms