RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
HCFC2-202ENST00000544223 MEIS3Q99687 375 aa17.31■□□□□ 0.36
HCFC2-202ENST00000544223 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
HCFC2-202ENST00000544223 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
HCFC2-202ENST00000544223 MSH5O43196 834 aa17.31■□□□□ 0.36
HCFC2-202ENST00000544223 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
HCFC2-202ENST00000544223 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
HCFC2-202ENST00000544223 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
HCFC2-202ENST00000544223 PHKG2P15735 406 aa17.3■□□□□ 0.36
HCFC2-202ENST00000544223 FLIIQ13045 1269 aa17.3■□□□□ 0.36
HCFC2-202ENST00000544223 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
HCFC2-202ENST00000544223 CPDO75976 1380 aa17.29■□□□□ 0.36
HCFC2-202ENST00000544223 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
HCFC2-202ENST00000544223 EVA1CP58658 441 aa17.29■□□□□ 0.36
HCFC2-202ENST00000544223 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
HCFC2-202ENST00000544223 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
HCFC2-202ENST00000544223 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
HCFC2-202ENST00000544223 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
HCFC2-202ENST00000544223 APBB1O00213 710 aa17.28■□□□□ 0.36
HCFC2-202ENST00000544223 C8orf34Q49A92 452 aa17.27■□□□□ 0.36
HCFC2-202ENST00000544223 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
HCFC2-202ENST00000544223 ABCA3Q99758 1704 aa17.27■□□□□ 0.36
HCFC2-202ENST00000544223 WDR17Q8IZU2 1322 aa17.27■□□□□ 0.35
HCFC2-202ENST00000544223 COL5A2P05997 1499 aaPredicted RBP17.27■□□□□ 0.35
HCFC2-202ENST00000544223 ADAMTS2O95450 1211 aa17.26■□□□□ 0.35
HCFC2-202ENST00000544223 NHSL1Q5SYE7 1610 aa17.26■□□□□ 0.35
HCFC2-202ENST00000544223 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
HCFC2-202ENST00000544223 SPG7Q9UQ90 795 aa17.26■□□□□ 0.35
HCFC2-202ENST00000544223 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
HCFC2-202ENST00000544223 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
HCFC2-202ENST00000544223 SEC24BO95487 1268 aa17.25■□□□□ 0.35
HCFC2-202ENST00000544223 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
HCFC2-202ENST00000544223 PTPRCP08575 1304 aa17.24■□□□□ 0.35
HCFC2-202ENST00000544223 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
HCFC2-202ENST00000544223 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
HCFC2-202ENST00000544223 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
HCFC2-202ENST00000544223 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
HCFC2-202ENST00000544223 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
HCFC2-202ENST00000544223 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
HCFC2-202ENST00000544223 AAMPQ13685 434 aa17.23■□□□□ 0.35
HCFC2-202ENST00000544223 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
HCFC2-202ENST00000544223 LTBP4Q8N2S1 1624 aa17.23■□□□□ 0.35
HCFC2-202ENST00000544223 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
HCFC2-202ENST00000544223 ZNF790Q6PG37 636 aa17.22■□□□□ 0.35
HCFC2-202ENST00000544223 ZNF496Q96IT1 587 aaPredicted RBP17.22■□□□□ 0.35
HCFC2-202ENST00000544223 MYL6BP14649 208 aa17.21■□□□□ 0.35
HCFC2-202ENST00000544223 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
HCFC2-202ENST00000544223 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
HCFC2-202ENST00000544223 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
HCFC2-202ENST00000544223 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
HCFC2-202ENST00000544223 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
HCFC2-202ENST00000544223 MYT1Q01538 1121 aa17.2■□□□□ 0.34
HCFC2-202ENST00000544223 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
HCFC2-202ENST00000544223 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
HCFC2-202ENST00000544223 SMARCA5O60264 1052 aaPredicted RBP17.19■□□□□ 0.34
HCFC2-202ENST00000544223 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
HCFC2-202ENST00000544223 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
HCFC2-202ENST00000544223 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
HCFC2-202ENST00000544223 EP400Q96L91 3159 aa17.19■□□□□ 0.34
HCFC2-202ENST00000544223 IL2RBP14784 551 aa17.19■□□□□ 0.34
HCFC2-202ENST00000544223 CABP4P57796 275 aa17.19■□□□□ 0.34
HCFC2-202ENST00000544223 CEP85Q6P2H3 762 aa17.19■□□□□ 0.34
HCFC2-202ENST00000544223 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
HCFC2-202ENST00000544223 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
HCFC2-202ENST00000544223 NUCB1Q02818 461 aa17.18■□□□□ 0.34
HCFC2-202ENST00000544223 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
HCFC2-202ENST00000544223 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
HCFC2-202ENST00000544223 CHD1LQ86WJ1 897 aa17.17■□□□□ 0.34
HCFC2-202ENST00000544223 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
HCFC2-202ENST00000544223 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
HCFC2-202ENST00000544223 C5P01031 1676 aa17.16■□□□□ 0.34
HCFC2-202ENST00000544223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
HCFC2-202ENST00000544223 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
HCFC2-202ENST00000544223 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
HCFC2-202ENST00000544223 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
HCFC2-202ENST00000544223 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
HCFC2-202ENST00000544223 PDIA6Q15084 440 aa17.15■□□□□ 0.34
HCFC2-202ENST00000544223 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
HCFC2-202ENST00000544223 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
HCFC2-202ENST00000544223 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
HCFC2-202ENST00000544223 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
HCFC2-202ENST00000544223 ADCY9O60503 1353 aa17.15■□□□□ 0.34
HCFC2-202ENST00000544223 ANKRD44Q8N8A2 993 aa17.14■□□□□ 0.33
HCFC2-202ENST00000544223 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
HCFC2-202ENST00000544223 HEG1Q9ULI3 1381 aa17.14■□□□□ 0.33
HCFC2-202ENST00000544223 ADAMTS7Q9UKP4 1686 aa17.14■□□□□ 0.33
HCFC2-202ENST00000544223 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
HCFC2-202ENST00000544223 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
HCFC2-202ENST00000544223 JARID2Q92833 1246 aaPredicted RBP17.14■□□□□ 0.33
HCFC2-202ENST00000544223 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
HCFC2-202ENST00000544223 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
HCFC2-202ENST00000544223 A0A0G2JS52 829 aa17.13■□□□□ 0.33
HCFC2-202ENST00000544223 SLC4A3P48751 1232 aa17.13■□□□□ 0.33
HCFC2-202ENST00000544223 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
HCFC2-202ENST00000544223 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
HCFC2-202ENST00000544223 DNAAF4Q8WXU2 420 aa17.12■□□□□ 0.33
HCFC2-202ENST00000544223 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
HCFC2-202ENST00000544223 CACNA1FO60840 1977 aa17.12■□□□□ 0.33
HCFC2-202ENST00000544223 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
HCFC2-202ENST00000544223 BEND3Q5T5X7 828 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms