RNA–Protein interactions for RNA: ENST00000543770.5

ATP1A3-207, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-207ENST00000543770 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
ATP1A3-207ENST00000543770 METP08581 1390 aa13.2□□□□□ -0.3
ATP1A3-207ENST00000543770 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 IL25Q9H293 177 aa13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 PNMA6EA0A0J9YXQ4 647 aa13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 GADD45BO75293 160 aaPredicted RBP13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 PDLIM2Q96JY6 352 aa13.19□□□□□ -0.3
ATP1A3-207ENST00000543770 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
ATP1A3-207ENST00000543770 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 UQCRHP07919 91 aa13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 ZNF830Q96NB3 372 aaPredicted RBP13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
ATP1A3-207ENST00000543770 ZKSCAN5Q9Y2L8 839 aa13.16□□□□□ -0.3
ATP1A3-207ENST00000543770 REREQ9P2R6 1566 aa13.16□□□□□ -0.3
ATP1A3-207ENST00000543770 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
ATP1A3-207ENST00000543770 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
ATP1A3-207ENST00000543770 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
ATP1A3-207ENST00000543770 HMMRO75330 724 aa13.15□□□□□ -0.3
ATP1A3-207ENST00000543770 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.3
ATP1A3-207ENST00000543770 AATKQ6ZMQ8 1374 aa13.15□□□□□ -0.3
ATP1A3-207ENST00000543770 MX1P20591 662 aa13.15□□□□□ -0.3
ATP1A3-207ENST00000543770 C17orf53Q8N3J3 647 aaPredicted RBP13.15□□□□□ -0.3
ATP1A3-207ENST00000543770 PTPRCP08575 1304 aa13.15□□□□□ -0.3
ATP1A3-207ENST00000543770 BRD1O95696 1058 aa13.14□□□□□ -0.31
ATP1A3-207ENST00000543770 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
ATP1A3-207ENST00000543770 TSC1Q92574 1164 aa13.14□□□□□ -0.31
ATP1A3-207ENST00000543770 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
ATP1A3-207ENST00000543770 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
ATP1A3-207ENST00000543770 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
ATP1A3-207ENST00000543770 ZNF500O60304 480 aaPredicted RBP13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 CHMLP26374 656 aa13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 BBXQ8WY36 941 aaPredicted RBP13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 GNAI2P04899 355 aa13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 A2ML1A8K2U0 1454 aa13.13□□□□□ -0.31
ATP1A3-207ENST00000543770 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 NEO1Q92859 1461 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 CPA1P15085 419 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 CRB1P82279 1406 aa13.12□□□□□ -0.31
ATP1A3-207ENST00000543770 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 ACEP12821 1306 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 OSBPL3Q9H4L5 887 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 CNPY2Q9Y2B0 182 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
ATP1A3-207ENST00000543770 MBD3O95983 291 aa13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 FLIIQ13045 1269 aa13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 CUL4AQ13619 759 aa13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 MCCP23508 829 aa13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
ATP1A3-207ENST00000543770 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
ATP1A3-207ENST00000543770 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
ATP1A3-207ENST00000543770 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
ATP1A3-207ENST00000543770 DLC1Q96QB1 1528 aa13.09□□□□□ -0.31
ATP1A3-207ENST00000543770 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
ATP1A3-207ENST00000543770 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
ATP1A3-207ENST00000543770 FIBPO43427 364 aa13.08□□□□□ -0.32
ATP1A3-207ENST00000543770 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
ATP1A3-207ENST00000543770 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
ATP1A3-207ENST00000543770 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
ATP1A3-207ENST00000543770 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
ATP1A3-207ENST00000543770 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
ATP1A3-207ENST00000543770 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
ATP1A3-207ENST00000543770 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
ATP1A3-207ENST00000543770 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
ATP1A3-207ENST00000543770 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 RPAP1Q9BWH6 1393 aaPredicted RBP13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 EYA1Q99502 592 aa13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 SETD1AO15047 1707 aaKnown RBP13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 SURF6O75683 361 aaKnown RBP13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 LARGE1O95461 756 aa13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 MCM2P49736 904 aa13.06□□□□□ -0.32
ATP1A3-207ENST00000543770 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms