RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 CEMIPQ8WUJ3 1361 aa23.72■■□□□ 1.39
TSFM-208ENST00000543727 UBR2Q8IWV8 1755 aa23.72■■□□□ 1.39
TSFM-208ENST00000543727 CCNL1Q9UK58 526 aaPredicted RBP23.71■■□□□ 1.39
TSFM-208ENST00000543727 TUBGCP6Q96RT7 1819 aa23.69■■□□□ 1.38
TSFM-208ENST00000543727 NFATC2IPQ8NCF5 419 aa23.69■■□□□ 1.38
TSFM-208ENST00000543727 LRRC4BQ9NT99 713 aa23.69■■□□□ 1.38
TSFM-208ENST00000543727 STK32BQ9NY57 414 aa23.69■■□□□ 1.38
TSFM-208ENST00000543727 CASZ1Q86V15 1759 aa23.69■■□□□ 1.38
TSFM-208ENST00000543727 C4BP0C0L5 1744 aa23.69■■□□□ 1.38
TSFM-208ENST00000543727 COL5A3P25940 1745 aaPredicted RBP23.69■■□□□ 1.38
TSFM-208ENST00000543727 RTF1Q92541 710 aaKnown RBP23.68■■□□□ 1.38
TSFM-208ENST00000543727 LGR6Q9HBX8 967 aa23.68■■□□□ 1.38
TSFM-208ENST00000543727 ATG3Q9NT62 314 aa23.68■■□□□ 1.38
TSFM-208ENST00000543727 ASAP1Q9ULH1 1129 aa23.68■■□□□ 1.38
TSFM-208ENST00000543727 LOC102724428A0A0B4J2F2 783 aa23.67■■□□□ 1.38
TSFM-208ENST00000543727 SIK1P57059 783 aa23.67■■□□□ 1.38
TSFM-208ENST00000543727 LRP5O75197 1615 aa23.66■■□□□ 1.38
TSFM-208ENST00000543727 TEFQ10587 303 aa23.66■■□□□ 1.38
TSFM-208ENST00000543727 R3HDM1Q15032 1099 aaKnown RBP23.66■■□□□ 1.38
TSFM-208ENST00000543727 NFE2L2Q16236 605 aa23.66■■□□□ 1.38
TSFM-208ENST00000543727 SLC15A2Q16348 729 aa23.66■■□□□ 1.38
TSFM-208ENST00000543727 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
TSFM-208ENST00000543727 IL17REQ8NFR9 667 aa23.65■■□□□ 1.38
TSFM-208ENST00000543727 RUNDC1Q96C34 613 aa23.64■■□□□ 1.37
TSFM-208ENST00000543727 TJP1Q07157 1748 aa23.64■■□□□ 1.37
TSFM-208ENST00000543727 UBR3Q6ZT12 1888 aa23.64■■□□□ 1.37
TSFM-208ENST00000543727 PSDA5PKW4 1024 aaPredicted RBP23.62■■□□□ 1.37
TSFM-208ENST00000543727 AKT1S1Q96B36 256 aa23.62■■□□□ 1.37
TSFM-208ENST00000543727 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
TSFM-208ENST00000543727 KCPQ6ZWJ8 1503 aa23.62■■□□□ 1.37
TSFM-208ENST00000543727 LMOD3Q0VAK6 560 aa23.61■■□□□ 1.37
TSFM-208ENST00000543727 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
TSFM-208ENST00000543727 KDM3BQ7LBC6 1761 aa23.6■■□□□ 1.37
TSFM-208ENST00000543727 ATP6V1AP38606 617 aa23.59■■□□□ 1.37
TSFM-208ENST00000543727 ZNF827Q17R98 1081 aa23.58■■□□□ 1.37
TSFM-208ENST00000543727 TTC5Q8N0Z6 440 aa23.58■■□□□ 1.37
TSFM-208ENST00000543727 TMPOP42166 694 aaKnown RBP23.57■■□□□ 1.36
TSFM-208ENST00000543727 KCNQ4P56696 695 aa23.57■■□□□ 1.36
TSFM-208ENST00000543727 VSIG10Q8N0Z9 540 aa23.57■■□□□ 1.36
TSFM-208ENST00000543727 RBM42Q9BTD8 480 aaKnown RBP23.57■■□□□ 1.36
TSFM-208ENST00000543727 COL24A1Q17RW2 1714 aa23.56■■□□□ 1.36
TSFM-208ENST00000543727 MCM10Q7L590 875 aa23.56■■□□□ 1.36
TSFM-208ENST00000543727 TFCP2L1Q9NZI6 479 aa23.56■■□□□ 1.36
TSFM-208ENST00000543727 ZNF790Q6PG37 636 aa23.55■■□□□ 1.36
TSFM-208ENST00000543727 FLAD1Q8NFF5 587 aa23.55■■□□□ 1.36
TSFM-208ENST00000543727 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
TSFM-208ENST00000543727 CNTNAP4Q9C0A0 1308 aa23.55■■□□□ 1.36
TSFM-208ENST00000543727 BTBD11A6QL63 1104 aa23.54■■□□□ 1.36
TSFM-208ENST00000543727 PTCD1O75127 700 aaKnown RBP23.54■■□□□ 1.36
TSFM-208ENST00000543727 RIPK4P57078 832 aa23.54■■□□□ 1.36
TSFM-208ENST00000543727 ITPK1Q13572 414 aa23.54■■□□□ 1.36
TSFM-208ENST00000543727 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
TSFM-208ENST00000543727 RC3H1Q5TC82 1133 aaKnown RBP23.54■■□□□ 1.36
TSFM-208ENST00000543727 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
TSFM-208ENST00000543727 AK7Q96M32 723 aa23.54■■□□□ 1.36
TSFM-208ENST00000543727 MYH14Q7Z406 1995 aaKnown RBP23.54■■□□□ 1.36
TSFM-208ENST00000543727 LINC00116Q8NCU8 138 aa23.53■■□□□ 1.36
TSFM-208ENST00000543727 SLC16A10Q8TF71 515 aa23.53■■□□□ 1.36
TSFM-208ENST00000543727 SLC4A9Q96Q91 983 aa23.53■■□□□ 1.36
TSFM-208ENST00000543727 SLC39A6Q13433 755 aa23.52■■□□□ 1.36
TSFM-208ENST00000543727 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
TSFM-208ENST00000543727 LAMB4A4D0S4 1761 aa23.52■■□□□ 1.36
TSFM-208ENST00000543727 SSFA2P28290 1259 aa23.51■■□□□ 1.35
TSFM-208ENST00000543727 DCTN1Q14203 1278 aa23.51■■□□□ 1.35
TSFM-208ENST00000543727 PNPLA7Q6ZV29 1317 aa23.51■■□□□ 1.35
TSFM-208ENST00000543727 FMNL2Q96PY5 1086 aa23.5■■□□□ 1.35
TSFM-208ENST00000543727 TEX13AQ9BXU3 409 aaPredicted RBP23.5■■□□□ 1.35
TSFM-208ENST00000543727 BABAM1Q9NWV8 329 aa23.5■■□□□ 1.35
TSFM-208ENST00000543727 HEG1Q9ULI3 1381 aa23.5■■□□□ 1.35
TSFM-208ENST00000543727 C4AP0C0L4 1744 aa23.48■■□□□ 1.35
TSFM-208ENST00000543727 ADRA2BP18089 450 aa23.48■■□□□ 1.35
TSFM-208ENST00000543727 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
TSFM-208ENST00000543727 MTFR1LQ9H019 292 aa23.48■■□□□ 1.35
TSFM-208ENST00000543727 SPON1Q9HCB6 807 aa23.48■■□□□ 1.35
TSFM-208ENST00000543727 ZNF496Q96IT1 587 aaPredicted RBP23.47■■□□□ 1.35
TSFM-208ENST00000543727 GNPATO15228 680 aa23.46■■□□□ 1.35
TSFM-208ENST00000543727 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
TSFM-208ENST00000543727 APAF1O14727 1248 aa23.45■■□□□ 1.34
TSFM-208ENST00000543727 STARD3NLO95772 234 aa23.45■■□□□ 1.34
TSFM-208ENST00000543727 RTCBQ9Y3I0 505 aaKnown RBP23.45■■□□□ 1.34
TSFM-208ENST00000543727 CRKLP46109 303 aaKnown RBP23.44■■□□□ 1.34
TSFM-208ENST00000543727 CALD1Q05682 793 aaKnown RBP23.44■■□□□ 1.34
TSFM-208ENST00000543727 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
TSFM-208ENST00000543727 DNAJC10Q8IXB1 793 aa23.44■■□□□ 1.34
TSFM-208ENST00000543727 TRIM35Q9UPQ4 493 aa23.44■■□□□ 1.34
TSFM-208ENST00000543727 RRP7AQ9Y3A4 280 aaKnown RBP23.44■■□□□ 1.34
TSFM-208ENST00000543727 RPS6KA4O75676 772 aa23.43■■□□□ 1.34
TSFM-208ENST00000543727 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
TSFM-208ENST00000543727 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
TSFM-208ENST00000543727 COL23A1Q86Y22 540 aaPredicted RBP23.43■■□□□ 1.34
TSFM-208ENST00000543727 PDGFDQ9GZP0 370 aaPredicted RBP23.43■■□□□ 1.34
TSFM-208ENST00000543727 CCDC87Q9NVE4 849 aa23.43■■□□□ 1.34
TSFM-208ENST00000543727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
TSFM-208ENST00000543727 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
TSFM-208ENST00000543727 SNRPA1P09661 255 aaKnown RBP23.41■■□□□ 1.34
TSFM-208ENST00000543727 CCDC27Q2M243 656 aa23.41■■□□□ 1.34
TSFM-208ENST00000543727 NGEFQ8N5V2 710 aa23.41■■□□□ 1.34
TSFM-208ENST00000543727 ZBTB7AO95365 584 aa23.4■■□□□ 1.34
TSFM-208ENST00000543727 KCNQ3O43525 872 aa23.39■■□□□ 1.33
TSFM-208ENST00000543727 TRAPPC3LQ5T215 181 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms