RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 RGPD3A6NKT7 1758 aaPredicted RBP14.69□□□□□ -0.06
DDB1-222ENST00000543627 RGPD4Q7Z3J3 1758 aa14.69□□□□□ -0.06
DDB1-222ENST00000543627 SRCAPQ6ZRS2 3230 aa14.69□□□□□ -0.06
DDB1-222ENST00000543627 PHF14O94880 888 aa14.68□□□□□ -0.06
DDB1-222ENST00000543627 TEFQ10587 303 aa14.68□□□□□ -0.06
DDB1-222ENST00000543627 SLC39A6Q13433 755 aa14.68□□□□□ -0.06
DDB1-222ENST00000543627 SMIM5Q71RC9 77 aa14.68□□□□□ -0.06
DDB1-222ENST00000543627 RTF1Q92541 710 aaKnown RBP14.68□□□□□ -0.06
DDB1-222ENST00000543627 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
DDB1-222ENST00000543627 PRKRIP1Q9H875 184 aaPredicted RBP14.68□□□□□ -0.06
DDB1-222ENST00000543627 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
DDB1-222ENST00000543627 WDR43Q15061 677 aaKnown RBP eCLIP14.67□□□□□ -0.06
DDB1-222ENST00000543627 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
DDB1-222ENST00000543627 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
DDB1-222ENST00000543627 MAP3K5Q99683 1374 aa14.66□□□□□ -0.06
DDB1-222ENST00000543627 DCTN1Q14203 1278 aa14.66□□□□□ -0.06
DDB1-222ENST00000543627 LINC00116Q8NCU8 138 aa14.66□□□□□ -0.06
DDB1-222ENST00000543627 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
DDB1-222ENST00000543627 ITPK1Q13572 414 aa14.65□□□□□ -0.06
DDB1-222ENST00000543627 MCM10Q7L590 875 aa14.65□□□□□ -0.06
DDB1-222ENST00000543627 CCDC146Q8IYE0 955 aa14.65□□□□□ -0.06
DDB1-222ENST00000543627 IL17REQ8NFR9 667 aa14.65□□□□□ -0.06
DDB1-222ENST00000543627 ANP32CO43423 234 aa14.64□□□□□ -0.07
DDB1-222ENST00000543627 HMGB2P26583 209 aaKnown RBP14.64□□□□□ -0.07
DDB1-222ENST00000543627 TTC5Q8N0Z6 440 aa14.64□□□□□ -0.07
DDB1-222ENST00000543627 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
DDB1-222ENST00000543627 PNPLA7Q6ZV29 1317 aa14.64□□□□□ -0.07
DDB1-222ENST00000543627 LY75O60449 1722 aa14.63□□□□□ -0.07
DDB1-222ENST00000543627 GNPATO15228 680 aa14.63□□□□□ -0.07
DDB1-222ENST00000543627 NEUROD2Q15784 382 aa14.63□□□□□ -0.07
DDB1-222ENST00000543627 COL23A1Q86Y22 540 aaPredicted RBP14.63□□□□□ -0.07
DDB1-222ENST00000543627 MSL1Q68DK7 614 aa14.62□□□□□ -0.07
DDB1-222ENST00000543627 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
DDB1-222ENST00000543627 MTFR1LQ9H019 292 aa14.62□□□□□ -0.07
DDB1-222ENST00000543627 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
DDB1-222ENST00000543627 SCN11AQ9UI33 1791 aa14.6□□□□□ -0.07
DDB1-222ENST00000543627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.6□□□□□ -0.07
DDB1-222ENST00000543627 POLD1P28340 1107 aa14.6□□□□□ -0.07
DDB1-222ENST00000543627 DNAJC10Q8IXB1 793 aa14.6□□□□□ -0.07
DDB1-222ENST00000543627 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
DDB1-222ENST00000543627 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
DDB1-222ENST00000543627 RRP7AQ9Y3A4 280 aaKnown RBP14.6□□□□□ -0.07
DDB1-222ENST00000543627 PAPPAQ13219 1627 aa14.59□□□□□ -0.07
DDB1-222ENST00000543627 RIPK4P57078 832 aa14.59□□□□□ -0.07
DDB1-222ENST00000543627 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
DDB1-222ENST00000543627 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
DDB1-222ENST00000543627 FLAD1Q8NFF5 587 aa14.59□□□□□ -0.07
DDB1-222ENST00000543627 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
DDB1-222ENST00000543627 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
DDB1-222ENST00000543627 RTCBQ9Y3I0 505 aaKnown RBP14.59□□□□□ -0.07
DDB1-222ENST00000543627 C5P01031 1676 aa14.58□□□□□ -0.07
DDB1-222ENST00000543627 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
DDB1-222ENST00000543627 KCNQ3O43525 872 aa14.58□□□□□ -0.08
DDB1-222ENST00000543627 TRAPPC3LQ5T215 181 aa14.58□□□□□ -0.08
DDB1-222ENST00000543627 SLC16A10Q8TF71 515 aa14.58□□□□□ -0.08
DDB1-222ENST00000543627 PTGER2P43116 358 aa14.57□□□□□ -0.08
DDB1-222ENST00000543627 CRKLP46109 303 aaKnown RBP14.57□□□□□ -0.08
DDB1-222ENST00000543627 CCDC184Q52MB2 194 aa14.57□□□□□ -0.08
DDB1-222ENST00000543627 ZNF790Q6PG37 636 aa14.57□□□□□ -0.08
DDB1-222ENST00000543627 ARXQ96QS3 562 aa14.57□□□□□ -0.08
DDB1-222ENST00000543627 C4BP0C0L5 1744 aa14.57□□□□□ -0.08
DDB1-222ENST00000543627 HTATSF1O43719 755 aaKnown RBP14.56□□□□□ -0.08
DDB1-222ENST00000543627 RFC4P35249 363 aa14.56□□□□□ -0.08
DDB1-222ENST00000543627 ZNF496Q96IT1 587 aaPredicted RBP14.56□□□□□ -0.08
DDB1-222ENST00000543627 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
DDB1-222ENST00000543627 VIRMAQ69YN4 1812 aaKnown RBP14.56□□□□□ -0.08
DDB1-222ENST00000543627 CASZ1Q86V15 1759 aa14.55□□□□□ -0.08
DDB1-222ENST00000543627 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
DDB1-222ENST00000543627 CANXP27824 592 aaKnown RBP14.55□□□□□ -0.08
DDB1-222ENST00000543627 SSFA2P28290 1259 aa14.55□□□□□ -0.08
DDB1-222ENST00000543627 TAF7Q15545 349 aaPredicted RBP14.55□□□□□ -0.08
DDB1-222ENST00000543627 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
DDB1-222ENST00000543627 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
DDB1-222ENST00000543627 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
DDB1-222ENST00000543627 LAS1LQ9Y4W2 734 aaKnown RBP14.55□□□□□ -0.08
DDB1-222ENST00000543627 RPS6KA4O75676 772 aa14.54□□□□□ -0.08
DDB1-222ENST00000543627 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
DDB1-222ENST00000543627 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
DDB1-222ENST00000543627 ARHGEF1Q92888 912 aaKnown RBP14.54□□□□□ -0.08
DDB1-222ENST00000543627 LRP5O75197 1615 aa14.54□□□□□ -0.08
DDB1-222ENST00000543627 TUBGCP6Q96RT7 1819 aa14.53□□□□□ -0.08
DDB1-222ENST00000543627 CNTNAP4Q9C0A0 1308 aa14.53□□□□□ -0.08
DDB1-222ENST00000543627 STARD3NLO95772 234 aa14.53□□□□□ -0.08
DDB1-222ENST00000543627 FHDC1Q9C0D6 1143 aaPredicted RBP14.53□□□□□ -0.08
DDB1-222ENST00000543627 CCDC87Q9NVE4 849 aa14.53□□□□□ -0.08
DDB1-222ENST00000543627 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
DDB1-222ENST00000543627 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
DDB1-222ENST00000543627 CYP19A1P11511 503 aaPredicted RBP14.52□□□□□ -0.09
DDB1-222ENST00000543627 INTS5Q6P9B9 1019 aaKnown RBP14.52□□□□□ -0.09
DDB1-222ENST00000543627 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.09
DDB1-222ENST00000543627 MRC1P22897 1456 aa14.51□□□□□ -0.09
DDB1-222ENST00000543627 HEG1Q9ULI3 1381 aa14.51□□□□□ -0.09
DDB1-222ENST00000543627 PRAMEF22A3QJZ6 481 aa14.51□□□□□ -0.09
DDB1-222ENST00000543627 LMOD3Q0VAK6 560 aa14.51□□□□□ -0.09
DDB1-222ENST00000543627 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
DDB1-222ENST00000543627 VSIG10Q8N0Z9 540 aa14.51□□□□□ -0.09
DDB1-222ENST00000543627 SRP68Q9UHB9 627 aaKnown RBP14.51□□□□□ -0.09
DDB1-222ENST00000543627 ZBTB1Q9Y2K1 713 aa14.51□□□□□ -0.09
DDB1-222ENST00000543627 APAF1O14727 1248 aa14.5□□□□□ -0.09
DDB1-222ENST00000543627 ZPR1O75312 459 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms