RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 EZH2Q15910 746 aaKnown RBP13.18□□□□□ -0.3
VEGFB-204ENST00000543462 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
VEGFB-204ENST00000543462 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
VEGFB-204ENST00000543462 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
VEGFB-204ENST00000543462 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
VEGFB-204ENST00000543462 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
VEGFB-204ENST00000543462 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
VEGFB-204ENST00000543462 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
VEGFB-204ENST00000543462 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
VEGFB-204ENST00000543462 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
VEGFB-204ENST00000543462 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
VEGFB-204ENST00000543462 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
VEGFB-204ENST00000543462 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
VEGFB-204ENST00000543462 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
VEGFB-204ENST00000543462 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
VEGFB-204ENST00000543462 TMPOP42166 694 aaKnown RBP13.15□□□□□ -0.3
VEGFB-204ENST00000543462 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
VEGFB-204ENST00000543462 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.3
VEGFB-204ENST00000543462 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.3
VEGFB-204ENST00000543462 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
VEGFB-204ENST00000543462 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
VEGFB-204ENST00000543462 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
VEGFB-204ENST00000543462 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
VEGFB-204ENST00000543462 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
VEGFB-204ENST00000543462 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
VEGFB-204ENST00000543462 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
VEGFB-204ENST00000543462 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
VEGFB-204ENST00000543462 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
VEGFB-204ENST00000543462 CABP4P57796 275 aa13.12□□□□□ -0.31
VEGFB-204ENST00000543462 MCM10Q7L590 875 aa13.12□□□□□ -0.31
VEGFB-204ENST00000543462 SMARCC1Q92922 1105 aaPredicted RBP13.12□□□□□ -0.31
VEGFB-204ENST00000543462 LRP5O75197 1615 aa13.11□□□□□ -0.31
VEGFB-204ENST00000543462 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
VEGFB-204ENST00000543462 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
VEGFB-204ENST00000543462 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
VEGFB-204ENST00000543462 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
VEGFB-204ENST00000543462 SIK1P57059 783 aa13.1□□□□□ -0.31
VEGFB-204ENST00000543462 MIER1Q8N108 512 aa13.1□□□□□ -0.31
VEGFB-204ENST00000543462 THUMPD2Q9BTF0 503 aaKnown RBP13.1□□□□□ -0.31
VEGFB-204ENST00000543462 APAF1O14727 1248 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 NEFMP07197 916 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 RIPK4P57078 832 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 ITPK1Q13572 414 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 ZNF827Q17R98 1081 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 CCNL1Q9UK58 526 aaPredicted RBP13.09□□□□□ -0.31
VEGFB-204ENST00000543462 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
VEGFB-204ENST00000543462 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
VEGFB-204ENST00000543462 SCN7AQ01118 1682 aa13.08□□□□□ -0.31
VEGFB-204ENST00000543462 KCNQ4P56696 695 aa13.08□□□□□ -0.32
VEGFB-204ENST00000543462 LMOD3Q0VAK6 560 aa13.08□□□□□ -0.32
VEGFB-204ENST00000543462 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
VEGFB-204ENST00000543462 TEFQ10587 303 aa13.07□□□□□ -0.32
VEGFB-204ENST00000543462 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
VEGFB-204ENST00000543462 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
VEGFB-204ENST00000543462 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
VEGFB-204ENST00000543462 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
VEGFB-204ENST00000543462 KCNQ3O43525 872 aa13.06□□□□□ -0.32
VEGFB-204ENST00000543462 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
VEGFB-204ENST00000543462 ZNF521Q96K83 1311 aa13.06□□□□□ -0.32
VEGFB-204ENST00000543462 CNTNAP4Q9C0A0 1308 aa13.06□□□□□ -0.32
VEGFB-204ENST00000543462 ZNF853P0CG23 659 aa13.05□□□□□ -0.32
VEGFB-204ENST00000543462 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
VEGFB-204ENST00000543462 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
VEGFB-204ENST00000543462 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
VEGFB-204ENST00000543462 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
VEGFB-204ENST00000543462 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
VEGFB-204ENST00000543462 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
VEGFB-204ENST00000543462 CHL1O00533 1208 aa13.03□□□□□ -0.32
VEGFB-204ENST00000543462 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
VEGFB-204ENST00000543462 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
VEGFB-204ENST00000543462 FAM9BQ8IZU0 186 aa13.03□□□□□ -0.32
VEGFB-204ENST00000543462 PNPLA7Q6ZV29 1317 aa13.03□□□□□ -0.32
VEGFB-204ENST00000543462 NEUROD2Q15784 382 aa13.02□□□□□ -0.33
VEGFB-204ENST00000543462 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
VEGFB-204ENST00000543462 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
VEGFB-204ENST00000543462 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
VEGFB-204ENST00000543462 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
VEGFB-204ENST00000543462 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
VEGFB-204ENST00000543462 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
VEGFB-204ENST00000543462 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
VEGFB-204ENST00000543462 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
VEGFB-204ENST00000543462 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
VEGFB-204ENST00000543462 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
VEGFB-204ENST00000543462 PDGFDQ9GZP0 370 aaPredicted RBP13.01□□□□□ -0.33
VEGFB-204ENST00000543462 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
VEGFB-204ENST00000543462 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
VEGFB-204ENST00000543462 IL16Q14005 1332 aa13□□□□□ -0.33
VEGFB-204ENST00000543462 NBPF14Q5TI25 921 aa13□□□□□ -0.33
VEGFB-204ENST00000543462 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
VEGFB-204ENST00000543462 TTC5Q8N0Z6 440 aa13□□□□□ -0.33
VEGFB-204ENST00000543462 CFAP44Q96MT7 982 aa13□□□□□ -0.33
VEGFB-204ENST00000543462 IFT57Q9NWB7 429 aa13□□□□□ -0.33
VEGFB-204ENST00000543462 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
VEGFB-204ENST00000543462 SOS1Q07889 1333 aaPredicted RBP12.99□□□□□ -0.33
VEGFB-204ENST00000543462 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
VEGFB-204ENST00000543462 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
VEGFB-204ENST00000543462 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
VEGFB-204ENST00000543462 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
VEGFB-204ENST00000543462 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms