RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 GCP02774 474 aa16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 KCNH5Q8NCM2 988 aa16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 LMO7Q8WWI1 1683 aa16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 SLIT3O75094 1523 aa16.99■□□□□ 0.31
SLC3A2-220ENST00000542922 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
SLC3A2-220ENST00000542922 GNAI2P04899 355 aa16.98■□□□□ 0.31
SLC3A2-220ENST00000542922 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
SLC3A2-220ENST00000542922 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
SLC3A2-220ENST00000542922 RGPD5Q99666 1765 aa16.98■□□□□ 0.31
SLC3A2-220ENST00000542922 SDSP20132 328 aa16.98■□□□□ 0.31
SLC3A2-220ENST00000542922 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
SLC3A2-220ENST00000542922 TSHZ3Q63HK5 1081 aa16.97■□□□□ 0.31
SLC3A2-220ENST00000542922 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
SLC3A2-220ENST00000542922 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
SLC3A2-220ENST00000542922 ARHGEF25Q86VW2 580 aa16.97■□□□□ 0.31
SLC3A2-220ENST00000542922 SNX21Q969T3 373 aa16.96■□□□□ 0.31
SLC3A2-220ENST00000542922 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
SLC3A2-220ENST00000542922 HMMRO75330 724 aa16.96■□□□□ 0.31
SLC3A2-220ENST00000542922 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
SLC3A2-220ENST00000542922 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.31
SLC3A2-220ENST00000542922 ANXA1P04083 346 aa16.95■□□□□ 0.3
SLC3A2-220ENST00000542922 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
SLC3A2-220ENST00000542922 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
SLC3A2-220ENST00000542922 DDIT3P35638 169 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 USP44Q9H0E7 712 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 KRT28Q7Z3Y7 464 aa16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 DDX17Q92841 729 aaKnown RBP16.94■□□□□ 0.3
SLC3A2-220ENST00000542922 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
SLC3A2-220ENST00000542922 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
SLC3A2-220ENST00000542922 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
SLC3A2-220ENST00000542922 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
SLC3A2-220ENST00000542922 GNAI3P08754 354 aa16.92■□□□□ 0.3
SLC3A2-220ENST00000542922 PDE1AP54750 535 aa16.92■□□□□ 0.3
SLC3A2-220ENST00000542922 AKAP4Q5JQC9 854 aa16.92■□□□□ 0.3
SLC3A2-220ENST00000542922 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
SLC3A2-220ENST00000542922 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
SLC3A2-220ENST00000542922 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
SLC3A2-220ENST00000542922 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 TEFQ10587 303 aa16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 BTBD11A6QL63 1104 aa16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 USP26Q9BXU7 913 aa16.91■□□□□ 0.3
SLC3A2-220ENST00000542922 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 MCM4P33991 863 aa16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
SLC3A2-220ENST00000542922 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.3
SLC3A2-220ENST00000542922 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
SLC3A2-220ENST00000542922 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
SLC3A2-220ENST00000542922 K7ELQ4 463 aaPredicted RBP16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
SLC3A2-220ENST00000542922 ADCY9O60503 1353 aa16.87■□□□□ 0.29
SLC3A2-220ENST00000542922 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
SLC3A2-220ENST00000542922 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
SLC3A2-220ENST00000542922 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
SLC3A2-220ENST00000542922 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
SLC3A2-220ENST00000542922 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
SLC3A2-220ENST00000542922 ERBB3P21860 1342 aa16.86■□□□□ 0.29
SLC3A2-220ENST00000542922 MX1P20591 662 aa16.86■□□□□ 0.29
SLC3A2-220ENST00000542922 BEND3Q5T5X7 828 aa16.86■□□□□ 0.29
SLC3A2-220ENST00000542922 MST1RQ04912 1400 aa16.86■□□□□ 0.29
SLC3A2-220ENST00000542922 AK9Q5TCS8 1911 aa16.85■□□□□ 0.29
SLC3A2-220ENST00000542922 PPP1R42Q7Z4L9 355 aa16.85■□□□□ 0.29
SLC3A2-220ENST00000542922 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
SLC3A2-220ENST00000542922 TMEM94Q12767 1356 aa16.85■□□□□ 0.29
SLC3A2-220ENST00000542922 HOXB7P09629 217 aa16.85■□□□□ 0.29
SLC3A2-220ENST00000542922 UNC5CLQ8IV45 518 aa16.84■□□□□ 0.29
SLC3A2-220ENST00000542922 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
SLC3A2-220ENST00000542922 SSH3Q8TE77 659 aa16.84■□□□□ 0.29
SLC3A2-220ENST00000542922 TNPO1Q92973 898 aaKnown RBP16.84■□□□□ 0.29
SLC3A2-220ENST00000542922 HSP90AA1P07900 732 aaKnown RBP16.84■□□□□ 0.29
SLC3A2-220ENST00000542922 CASC1Q6TDU7 716 aa16.84■□□□□ 0.29
SLC3A2-220ENST00000542922 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
SLC3A2-220ENST00000542922 RABEP1Q15276 862 aa16.83■□□□□ 0.28
SLC3A2-220ENST00000542922 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
SLC3A2-220ENST00000542922 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
SLC3A2-220ENST00000542922 ADAMTS7Q9UKP4 1686 aa16.83■□□□□ 0.28
SLC3A2-220ENST00000542922 ERC2O15083 957 aa16.82■□□□□ 0.28
SLC3A2-220ENST00000542922 POLA2Q14181 598 aa16.82■□□□□ 0.28
SLC3A2-220ENST00000542922 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
SLC3A2-220ENST00000542922 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
SLC3A2-220ENST00000542922 OVOS2A0A0G2JMS6 1433 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms