RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
MRPL40P1-201ENST00000542687 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
MRPL40P1-201ENST00000542687 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
MRPL40P1-201ENST00000542687 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
MRPL40P1-201ENST00000542687 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
MRPL40P1-201ENST00000542687 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.37□□□□□ -0.75
MRPL40P1-201ENST00000542687 KRT27Q7Z3Y8 459 aa10.36□□□□□ -0.75
MRPL40P1-201ENST00000542687 TTC5Q8N0Z6 440 aa10.36□□□□□ -0.75
MRPL40P1-201ENST00000542687 ACSBG1Q96GR2 724 aa10.36□□□□□ -0.75
MRPL40P1-201ENST00000542687 RCAN3Q9UKA8 241 aa10.36□□□□□ -0.75
MRPL40P1-201ENST00000542687 PARP4Q9UKK3 1724 aaKnown RBP10.36□□□□□ -0.75
MRPL40P1-201ENST00000542687 ELL2O00472 640 aaPredicted RBP10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 KCNQ3O43525 872 aa10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 ZNF790Q6PG37 636 aa10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 PIGBQ92521 554 aa10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 GLI3P10071 1580 aa10.35□□□□□ -0.75
MRPL40P1-201ENST00000542687 FAM196AQ6ZSG2 479 aa10.34□□□□□ -0.75
MRPL40P1-201ENST00000542687 TSPYL6Q8N831 410 aa10.34□□□□□ -0.75
MRPL40P1-201ENST00000542687 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
MRPL40P1-201ENST00000542687 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
MRPL40P1-201ENST00000542687 CHMP4AQ9BY43 222 aa10.34□□□□□ -0.75
MRPL40P1-201ENST00000542687 PKD1L3Q7Z443 1732 aa10.33□□□□□ -0.76
MRPL40P1-201ENST00000542687 VAMP4O75379 141 aa10.33□□□□□ -0.76
MRPL40P1-201ENST00000542687 KRT24Q2M2I5 525 aa10.33□□□□□ -0.76
MRPL40P1-201ENST00000542687 FAM182BQ5T319 152 aa10.33□□□□□ -0.76
MRPL40P1-201ENST00000542687 SOS1Q07889 1333 aaPredicted RBP10.33□□□□□ -0.76
MRPL40P1-201ENST00000542687 KCNQ2O43526 872 aa10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 RARSP54136 660 aaKnown RBP10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 ASAP1Q9ULH1 1129 aa10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 EP400Q96L91 3159 aa10.32□□□□□ -0.76
MRPL40P1-201ENST00000542687 PTCD1O75127 700 aaKnown RBP10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 GIGYF1O75420 1035 aaPredicted RBP10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 HOXB7P09629 217 aa10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 SNRPA1P09661 255 aaKnown RBP10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 ALDH1L2Q3SY69 923 aa10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 BCL9O00512 1426 aa10.31□□□□□ -0.76
MRPL40P1-201ENST00000542687 MRC1P22897 1456 aa10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 EIF2S2P20042 333 aaKnown RBP10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 HDGFL1Q5TGJ6 251 aa10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 SSH1Q8WYL5 1049 aa10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 RBM42Q9BTD8 480 aaKnown RBP10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 STK31Q9BXU1 1019 aa10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 TEX13AQ9BXU3 409 aaPredicted RBP10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 BCL11BQ9C0K0 894 aaPredicted RBP10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 SMC4Q9NTJ3 1288 aa10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 THSD7AQ9UPZ6 1657 aa10.3□□□□□ -0.76
MRPL40P1-201ENST00000542687 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
MRPL40P1-201ENST00000542687 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
MRPL40P1-201ENST00000542687 BCAR3O75815 825 aa10.29□□□□□ -0.76
MRPL40P1-201ENST00000542687 CANXP27824 592 aaKnown RBP10.29□□□□□ -0.76
MRPL40P1-201ENST00000542687 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
MRPL40P1-201ENST00000542687 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
MRPL40P1-201ENST00000542687 HEG1Q9ULI3 1381 aa10.28□□□□□ -0.76
MRPL40P1-201ENST00000542687 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
MRPL40P1-201ENST00000542687 NECTIN2Q92692 538 aa10.28□□□□□ -0.76
MRPL40P1-201ENST00000542687 BCL2L13Q9BXK5 485 aa10.28□□□□□ -0.76
MRPL40P1-201ENST00000542687 DLG5Q8TDM6 1919 aa10.27□□□□□ -0.76
MRPL40P1-201ENST00000542687 PRAMEF22A3QJZ6 481 aa10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 IPO8O15397 1037 aaKnown RBP10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 TRIM37O94972 964 aa10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 STARD3NLO95772 234 aa10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 RRP1P56182 461 aaKnown RBP10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 PTF1AQ7RTS3 328 aa10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 FRAT1Q92837 279 aaPredicted RBP10.27□□□□□ -0.77
MRPL40P1-201ENST00000542687 LOC102724428A0A0B4J2F2 783 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 NEFLP07196 543 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 SIK1P57059 783 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 DBF4Q9UBU7 674 aaPredicted RBP10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 SHANK3Q9BYB0 1731 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 WNK3Q9BYP7 1800 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
MRPL40P1-201ENST00000542687 PLIN1O60240 522 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 MS4A1P11836 297 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 ZKSCAN2Q63HK3 967 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 HYPKQ9NX55 129 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 CHPF2Q9P2E5 772 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 RNF123Q5XPI4 1314 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 KIF16BQ96L93 1317 aa10.25□□□□□ -0.77
MRPL40P1-201ENST00000542687 SCN11AQ9UI33 1791 aa10.24□□□□□ -0.77
MRPL40P1-201ENST00000542687 BRWD3Q6RI45 1802 aa10.24□□□□□ -0.77
MRPL40P1-201ENST00000542687 HMGB2P26583 209 aaKnown RBP10.24□□□□□ -0.77
MRPL40P1-201ENST00000542687 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
MRPL40P1-201ENST00000542687 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
MRPL40P1-201ENST00000542687 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms