RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 ITGB4P16144 1822 aa16.25■□□□□ 0.19
LMO3-228ENST00000541846 A0A0G2JS52 829 aa16.25■□□□□ 0.19
LMO3-228ENST00000541846 MYT1Q01538 1121 aa16.25■□□□□ 0.19
LMO3-228ENST00000541846 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
LMO3-228ENST00000541846 CHL1O00533 1208 aa16.24■□□□□ 0.19
LMO3-228ENST00000541846 TEFQ10587 303 aa16.24■□□□□ 0.19
LMO3-228ENST00000541846 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
LMO3-228ENST00000541846 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
LMO3-228ENST00000541846 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
LMO3-228ENST00000541846 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
LMO3-228ENST00000541846 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
LMO3-228ENST00000541846 EP400Q96L91 3159 aa16.21■□□□□ 0.19
LMO3-228ENST00000541846 FAM196AQ6ZSG2 479 aa16.21■□□□□ 0.19
LMO3-228ENST00000541846 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.19
LMO3-228ENST00000541846 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
LMO3-228ENST00000541846 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
LMO3-228ENST00000541846 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
LMO3-228ENST00000541846 TSPYL4Q9UJ04 414 aa16.2■□□□□ 0.18
LMO3-228ENST00000541846 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
LMO3-228ENST00000541846 FAM182BQ5T319 152 aa16.19■□□□□ 0.18
LMO3-228ENST00000541846 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
LMO3-228ENST00000541846 CABP4P57796 275 aa16.18■□□□□ 0.18
LMO3-228ENST00000541846 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
LMO3-228ENST00000541846 BTBD11A6QL63 1104 aa16.17■□□□□ 0.18
LMO3-228ENST00000541846 PIGBQ92521 554 aa16.17■□□□□ 0.18
LMO3-228ENST00000541846 UBR2Q8IWV8 1755 aa16.17■□□□□ 0.18
LMO3-228ENST00000541846 KCNQ2O43526 872 aa16.16■□□□□ 0.18
LMO3-228ENST00000541846 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
LMO3-228ENST00000541846 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
LMO3-228ENST00000541846 KCNQ3O43525 872 aa16.15■□□□□ 0.18
LMO3-228ENST00000541846 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
LMO3-228ENST00000541846 TSPYL6Q8N831 410 aa16.15■□□□□ 0.18
LMO3-228ENST00000541846 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
LMO3-228ENST00000541846 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
LMO3-228ENST00000541846 CT47B1P0C2W7 299 aaPredicted RBP16.14■□□□□ 0.17
LMO3-228ENST00000541846 ACSBG1Q96GR2 724 aa16.14■□□□□ 0.17
LMO3-228ENST00000541846 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
LMO3-228ENST00000541846 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
LMO3-228ENST00000541846 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
LMO3-228ENST00000541846 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
LMO3-228ENST00000541846 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
LMO3-228ENST00000541846 C5P01031 1676 aa16.13■□□□□ 0.17
LMO3-228ENST00000541846 NHSQ6T4R5 1651 aa16.13■□□□□ 0.17
LMO3-228ENST00000541846 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
LMO3-228ENST00000541846 VAMP4O75379 141 aa16.12■□□□□ 0.17
LMO3-228ENST00000541846 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
LMO3-228ENST00000541846 SUPT16HQ9Y5B9 1047 aaKnown RBP16.12■□□□□ 0.17
LMO3-228ENST00000541846 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
LMO3-228ENST00000541846 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
LMO3-228ENST00000541846 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
LMO3-228ENST00000541846 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
LMO3-228ENST00000541846 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
LMO3-228ENST00000541846 RARSP54136 660 aaKnown RBP16.1■□□□□ 0.17
LMO3-228ENST00000541846 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
LMO3-228ENST00000541846 BTAF1O14981 1849 aa16.1■□□□□ 0.17
LMO3-228ENST00000541846 CACNA1FO60840 1977 aa16.09■□□□□ 0.17
LMO3-228ENST00000541846 TRIM37O94972 964 aa16.09■□□□□ 0.17
LMO3-228ENST00000541846 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
LMO3-228ENST00000541846 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
LMO3-228ENST00000541846 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
LMO3-228ENST00000541846 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
LMO3-228ENST00000541846 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
LMO3-228ENST00000541846 RNF123Q5XPI4 1314 aa16.08■□□□□ 0.16
LMO3-228ENST00000541846 BCAR3O75815 825 aa16.07■□□□□ 0.16
LMO3-228ENST00000541846 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
LMO3-228ENST00000541846 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
LMO3-228ENST00000541846 PLSCR1O15162 318 aa16.06■□□□□ 0.16
LMO3-228ENST00000541846 GIGYF1O75420 1035 aaPredicted RBP16.06■□□□□ 0.16
LMO3-228ENST00000541846 HOXB7P09629 217 aa16.06■□□□□ 0.16
LMO3-228ENST00000541846 ALDH1L2Q3SY69 923 aa16.06■□□□□ 0.16
LMO3-228ENST00000541846 ILDR2Q71H61 639 aa16.06■□□□□ 0.16
LMO3-228ENST00000541846 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
LMO3-228ENST00000541846 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
LMO3-228ENST00000541846 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
LMO3-228ENST00000541846 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
LMO3-228ENST00000541846 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
LMO3-228ENST00000541846 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
LMO3-228ENST00000541846 TJP1Q07157 1748 aa16.05■□□□□ 0.16
LMO3-228ENST00000541846 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
LMO3-228ENST00000541846 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
LMO3-228ENST00000541846 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
LMO3-228ENST00000541846 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
LMO3-228ENST00000541846 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
LMO3-228ENST00000541846 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
LMO3-228ENST00000541846 MRPL50Q8N5N7 158 aaKnown RBP16.03■□□□□ 0.16
LMO3-228ENST00000541846 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
LMO3-228ENST00000541846 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
LMO3-228ENST00000541846 APBA3O96018 575 aa16.02■□□□□ 0.16
LMO3-228ENST00000541846 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.16
LMO3-228ENST00000541846 SIK1P57059 783 aa16.02■□□□□ 0.16
LMO3-228ENST00000541846 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.16
LMO3-228ENST00000541846 PROM2Q8N271 834 aa16.02■□□□□ 0.16
LMO3-228ENST00000541846 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
LMO3-228ENST00000541846 LY75O60449 1722 aa16.02■□□□□ 0.15
LMO3-228ENST00000541846 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.15
LMO3-228ENST00000541846 PLIN1O60240 522 aa16.01■□□□□ 0.15
LMO3-228ENST00000541846 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
LMO3-228ENST00000541846 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
LMO3-228ENST00000541846 KIF16BQ96L93 1317 aa16■□□□□ 0.15
LMO3-228ENST00000541846 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms