RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
GCFC2-211ENST00000541687 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.36
GCFC2-211ENST00000541687 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.36
GCFC2-211ENST00000541687 DTNBO60941 627 aa17.32■□□□□ 0.36
GCFC2-211ENST00000541687 EYA1Q99502 592 aa17.32■□□□□ 0.36
GCFC2-211ENST00000541687 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
GCFC2-211ENST00000541687 BLOC1S2Q6QNY1 142 aa17.32■□□□□ 0.36
GCFC2-211ENST00000541687 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
GCFC2-211ENST00000541687 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
GCFC2-211ENST00000541687 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
GCFC2-211ENST00000541687 ZSCAN30Q86W11 494 aa17.31■□□□□ 0.36
GCFC2-211ENST00000541687 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
GCFC2-211ENST00000541687 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
GCFC2-211ENST00000541687 CHD1O14646 1710 aa17.31■□□□□ 0.36
GCFC2-211ENST00000541687 RAB3GAP1Q15042 981 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 KLHL40Q2TBA0 621 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 DDX11Q96FC9 970 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 SBNO2Q9Y2G9 1366 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 TRPM2O94759 1503 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 TRPM1Q7Z4N2 1603 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 TPM4P67936 248 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
GCFC2-211ENST00000541687 RBM25P49756 843 aaKnown RBP17.3■□□□□ 0.36
GCFC2-211ENST00000541687 MSH6P52701 1360 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
GCFC2-211ENST00000541687 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
GCFC2-211ENST00000541687 PPFIA3O75145 1194 aa17.29■□□□□ 0.36
GCFC2-211ENST00000541687 CAMK4Q16566 473 aa17.29■□□□□ 0.36
GCFC2-211ENST00000541687 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
GCFC2-211ENST00000541687 STRN4Q9NRL3 753 aa17.29■□□□□ 0.36
GCFC2-211ENST00000541687 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
GCFC2-211ENST00000541687 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
GCFC2-211ENST00000541687 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
GCFC2-211ENST00000541687 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 CLSTN1O94985 981 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 PDCP20941 246 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 SDF4Q9BRK5 362 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 SYNMO15061 1565 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 TNRQ92752 1358 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 CABP4P57796 275 aa17.28■□□□□ 0.36
GCFC2-211ENST00000541687 KRT85P78386 507 aa17.27■□□□□ 0.36
GCFC2-211ENST00000541687 TRDNQ13061 729 aa17.27■□□□□ 0.36
GCFC2-211ENST00000541687 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
GCFC2-211ENST00000541687 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.36
GCFC2-211ENST00000541687 ZFYVE9O95405 1425 aa17.27■□□□□ 0.36
GCFC2-211ENST00000541687 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.35
GCFC2-211ENST00000541687 MYD88Q99836 296 aa17.27■□□□□ 0.35
GCFC2-211ENST00000541687 RRAGDQ9NQL2 400 aaPredicted RBP17.27■□□□□ 0.35
GCFC2-211ENST00000541687 HIP1O00291 1037 aa17.26■□□□□ 0.35
GCFC2-211ENST00000541687 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
GCFC2-211ENST00000541687 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
GCFC2-211ENST00000541687 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
GCFC2-211ENST00000541687 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
GCFC2-211ENST00000541687 CDC42BPBQ9Y5S2 1711 aa17.26■□□□□ 0.35
GCFC2-211ENST00000541687 FKBP4Q02790 459 aaKnown RBP eCLIP17.25■□□□□ 0.35
GCFC2-211ENST00000541687 USP25Q9UHP3 1055 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 PDE4CQ08493 712 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 CCAR2Q8N163 923 aaKnown RBP17.25■□□□□ 0.35
GCFC2-211ENST00000541687 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 POGZQ7Z3K3 1410 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
GCFC2-211ENST00000541687 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
GCFC2-211ENST00000541687 USP19O94966 1318 aa17.24■□□□□ 0.35
GCFC2-211ENST00000541687 CHL1O00533 1208 aa17.24■□□□□ 0.35
GCFC2-211ENST00000541687 CPLX2Q6PUV4 134 aaKnown RBP17.24■□□□□ 0.35
GCFC2-211ENST00000541687 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
GCFC2-211ENST00000541687 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
GCFC2-211ENST00000541687 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
GCFC2-211ENST00000541687 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
GCFC2-211ENST00000541687 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
GCFC2-211ENST00000541687 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
GCFC2-211ENST00000541687 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
GCFC2-211ENST00000541687 ATP5J2-PTCD1G3V325 749 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 ATP2B1P20020 1258 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 CPA1P15085 419 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
GCFC2-211ENST00000541687 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 RASSF8Q8NHQ8 419 aa17.23■□□□□ 0.35
GCFC2-211ENST00000541687 PIK3R4Q99570 1358 aa17.22■□□□□ 0.35
GCFC2-211ENST00000541687 POLR1AO95602 1720 aaPredicted RBP17.22■□□□□ 0.35
GCFC2-211ENST00000541687 LETM1O95202 739 aaPredicted RBP17.22■□□□□ 0.35
GCFC2-211ENST00000541687 UQCRHLA0A096LP55 91 aa17.22■□□□□ 0.35
GCFC2-211ENST00000541687 UQCRHP07919 91 aa17.22■□□□□ 0.35
GCFC2-211ENST00000541687 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms