RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 TTC13Q8NBP0 860 aa8.78□□□□□ -1
EPHA4-214ENST00000541600 CALR3Q96L12 384 aaKnown RBP8.78□□□□□ -1
EPHA4-214ENST00000541600 NHSL1Q5SYE7 1610 aa8.78□□□□□ -1
EPHA4-214ENST00000541600 PDE4CQ08493 712 aa8.77□□□□□ -1.01
EPHA4-214ENST00000541600 DUSP27Q5VZP5 1158 aa8.77□□□□□ -1.01
EPHA4-214ENST00000541600 RIC3Q7Z5B4 369 aa8.77□□□□□ -1.01
EPHA4-214ENST00000541600 RBM27Q9P2N5 1060 aaKnown RBP8.77□□□□□ -1.01
EPHA4-214ENST00000541600 NWD1Q149M9 1564 aa8.77□□□□□ -1.01
EPHA4-214ENST00000541600 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-214ENST00000541600 TMEM2Q9UHN6 1383 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 MFAP1P55081 439 aaKnown RBP8.76□□□□□ -1.01
EPHA4-214ENST00000541600 SLFN5Q08AF3 891 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 WDR43Q15061 677 aaKnown RBP eCLIP8.76□□□□□ -1.01
EPHA4-214ENST00000541600 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 CARD14Q9BXL6 1004 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 SLC52A1Q9NWF4 448 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 ATRNO75882 1429 aa8.76□□□□□ -1.01
EPHA4-214ENST00000541600 PNPLA6Q8IY17 1366 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 PLEKHH1Q9ULM0 1364 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 ADAMTS2O95450 1211 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 EXOC6Q8TAG9 804 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 GLMNQ92990 594 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 NGLY1Q96IV0 654 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 PRM3Q9NNZ6 103 aa8.75□□□□□ -1.01
EPHA4-214ENST00000541600 NSD2O96028 1365 aa8.74□□□□□ -1.01
EPHA4-214ENST00000541600 NINLQ9Y2I6 1382 aa8.74□□□□□ -1.01
EPHA4-214ENST00000541600 SPTLC1O15269 473 aa8.74□□□□□ -1.01
EPHA4-214ENST00000541600 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-214ENST00000541600 NEXMIFQ5QGS0 1516 aa8.74□□□□□ -1.01
EPHA4-214ENST00000541600 QRICH2Q9H0J4 1663 aa8.73□□□□□ -1.01
EPHA4-214ENST00000541600 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
EPHA4-214ENST00000541600 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
EPHA4-214ENST00000541600 ABL2P42684 1182 aa8.73□□□□□ -1.01
EPHA4-214ENST00000541600 CNGB1Q14028 1251 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-214ENST00000541600 C6orf132Q5T0Z8 1188 aa8.73□□□□□ -1.01
EPHA4-214ENST00000541600 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-214ENST00000541600 USP21Q9UK80 565 aa8.73□□□□□ -1.01
EPHA4-214ENST00000541600 PATL2C9JE40 543 aaKnown RBP8.72□□□□□ -1.01
EPHA4-214ENST00000541600 E9PSI1 815 aa8.72□□□□□ -1.01
EPHA4-214ENST00000541600 AAMPQ13685 434 aa8.72□□□□□ -1.01
EPHA4-214ENST00000541600 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
EPHA4-214ENST00000541600 TRPC5Q9UL62 973 aaPredicted RBP8.72□□□□□ -1.01
EPHA4-214ENST00000541600 ARHGEF28Q8N1W1 1705 aaKnown RBP8.71□□□□□ -1.01
EPHA4-214ENST00000541600 FOSBP53539 338 aa8.71□□□□□ -1.02
EPHA4-214ENST00000541600 CCDC27Q2M243 656 aa8.71□□□□□ -1.02
EPHA4-214ENST00000541600 RSBN1LQ6PCB5 846 aaPredicted RBP8.71□□□□□ -1.02
EPHA4-214ENST00000541600 TBC1D2BQ9UPU7 963 aa8.71□□□□□ -1.02
EPHA4-214ENST00000541600 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
EPHA4-214ENST00000541600 PCDHGA4Q9Y5G9 962 aa8.71□□□□□ -1.02
EPHA4-214ENST00000541600 EID1Q9Y6B2 187 aa8.71□□□□□ -1.02
EPHA4-214ENST00000541600 KDM2BQ8NHM5 1336 aa8.71□□□□□ -1.02
EPHA4-214ENST00000541600 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.71□□□□□ -1.02
EPHA4-214ENST00000541600 SEC24BO95487 1268 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 CD46P15529 392 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 GJA5P36382 358 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 C1QTNF8P60827 252 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 IDI1Q13907 227 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 R3HDM1Q15032 1099 aaKnown RBP8.7□□□□□ -1.02
EPHA4-214ENST00000541600 PBXIP1Q96AQ6 731 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
EPHA4-214ENST00000541600 BACH2Q9BYV9 841 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 CGNL1Q0VF96 1302 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 ANKRD36BQ8N2N9 1353 aa8.7□□□□□ -1.02
EPHA4-214ENST00000541600 CFAP65Q6ZU64 1925 aaKnown RBP8.7□□□□□ -1.02
EPHA4-214ENST00000541600 TMEM131LA2VDJ0 1609 aa8.69□□□□□ -1.02
EPHA4-214ENST00000541600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
EPHA4-214ENST00000541600 LILRB3O75022 631 aa8.69□□□□□ -1.02
EPHA4-214ENST00000541600 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
EPHA4-214ENST00000541600 CENPQQ7L2Z9 268 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-214ENST00000541600 WDR63Q8IWG1 891 aa8.69□□□□□ -1.02
EPHA4-214ENST00000541600 CRBNQ96SW2 442 aa8.69□□□□□ -1.02
EPHA4-214ENST00000541600 C19orf44Q9H6X5 657 aa8.69□□□□□ -1.02
EPHA4-214ENST00000541600 ANP32AP39687 249 aaKnown RBP8.68□□□□□ -1.02
EPHA4-214ENST00000541600 PRSS12P56730 875 aa8.68□□□□□ -1.02
EPHA4-214ENST00000541600 KCNA1Q09470 495 aa8.68□□□□□ -1.02
EPHA4-214ENST00000541600 QPCTQ16769 361 aa8.68□□□□□ -1.02
EPHA4-214ENST00000541600 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
EPHA4-214ENST00000541600 NSD3Q9BZ95 1437 aa8.68□□□□□ -1.02
EPHA4-214ENST00000541600 TULP4Q9NRJ4 1543 aa8.68□□□□□ -1.02
EPHA4-214ENST00000541600 CHD2O14647 1828 aaKnown RBP8.68□□□□□ -1.02
EPHA4-214ENST00000541600 APAF1O14727 1248 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 AP1G2O75843 785 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 BRD1O95696 1058 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 FOXD4L5Q5VV16 416 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-214ENST00000541600 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 FOXD4L4Q8WXT5 416 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-214ENST00000541600 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 RUNDC1Q96C34 613 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-214ENST00000541600 USTQ9Y2C2 406 aa8.67□□□□□ -1.02
EPHA4-214ENST00000541600 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
EPHA4-214ENST00000541600 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-214ENST00000541600 DLC1Q96QB1 1528 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 MST1RQ04912 1400 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 NCOA3Q9Y6Q9 1424 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms