RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 K7ELQ4 463 aaPredicted RBP11.89□□□□□ -0.51
CNOT4-212ENST00000541284 CDC45O75419 566 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 FLT4P35916 1363 aa11.88□□□□□ -0.51
CNOT4-212ENST00000541284 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
CNOT4-212ENST00000541284 MCM10Q7L590 875 aa11.88□□□□□ -0.51
CNOT4-212ENST00000541284 USP26Q9BXU7 913 aa11.87□□□□□ -0.51
CNOT4-212ENST00000541284 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
CNOT4-212ENST00000541284 PXDNLA1KZ92 1463 aa11.87□□□□□ -0.51
CNOT4-212ENST00000541284 CYP2E1P05181 493 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-212ENST00000541284 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
CNOT4-212ENST00000541284 MEIS3Q99687 375 aa11.86□□□□□ -0.51
CNOT4-212ENST00000541284 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
CNOT4-212ENST00000541284 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
CNOT4-212ENST00000541284 SSFA2P28290 1259 aa11.86□□□□□ -0.51
CNOT4-212ENST00000541284 MAP3K19Q56UN5 1328 aa11.85□□□□□ -0.51
CNOT4-212ENST00000541284 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
CNOT4-212ENST00000541284 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
CNOT4-212ENST00000541284 GRPEL1Q9HAV7 217 aa11.85□□□□□ -0.51
CNOT4-212ENST00000541284 MRE11P49959 708 aa11.85□□□□□ -0.51
CNOT4-212ENST00000541284 SLC26A8Q96RN1 970 aa11.85□□□□□ -0.51
CNOT4-212ENST00000541284 PTPRCP08575 1304 aa11.85□□□□□ -0.51
CNOT4-212ENST00000541284 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
CNOT4-212ENST00000541284 RPAP2Q8IXW5 612 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-212ENST00000541284 RREB1Q92766 1687 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
CNOT4-212ENST00000541284 SDSP20132 328 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 G2E3Q7L622 706 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 EID1Q9Y6B2 187 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 TJP1Q07157 1748 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 FOXO3O43524 673 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 HEG1Q9ULI3 1381 aa11.84□□□□□ -0.51
CNOT4-212ENST00000541284 ARXQ96QS3 562 aa11.83□□□□□ -0.52
CNOT4-212ENST00000541284 ISY1Q9ULR0 285 aaKnown RBP11.83□□□□□ -0.52
CNOT4-212ENST00000541284 PHLPP1O60346 1717 aa11.82□□□□□ -0.52
CNOT4-212ENST00000541284 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
CNOT4-212ENST00000541284 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
CNOT4-212ENST00000541284 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
CNOT4-212ENST00000541284 PKP1Q13835 747 aa11.82□□□□□ -0.52
CNOT4-212ENST00000541284 RABEP1Q15276 862 aa11.82□□□□□ -0.52
CNOT4-212ENST00000541284 MIS18AQ9NYP9 233 aa11.81□□□□□ -0.52
CNOT4-212ENST00000541284 BAG4O95429 457 aaKnown RBP11.81□□□□□ -0.52
CNOT4-212ENST00000541284 CLCN1P35523 988 aa11.81□□□□□ -0.52
CNOT4-212ENST00000541284 GBP4Q96PP9 640 aa11.8□□□□□ -0.52
CNOT4-212ENST00000541284 ZDHHC9Q9Y397 364 aa11.8□□□□□ -0.52
CNOT4-212ENST00000541284 AHDC1Q5TGY3 1603 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-212ENST00000541284 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
CNOT4-212ENST00000541284 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
CNOT4-212ENST00000541284 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
CNOT4-212ENST00000541284 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
CNOT4-212ENST00000541284 F6X3S4 739 aa11.79□□□□□ -0.52
CNOT4-212ENST00000541284 LRP6O75581 1613 aa11.79□□□□□ -0.52
CNOT4-212ENST00000541284 SKOR2Q2VWA4 1001 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-212ENST00000541284 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 ITGB4P16144 1822 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 KLHL40Q2TBA0 621 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 ANKLE2Q86XL3 938 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 EYA1Q99502 592 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 LMBRD1Q9NUN5 540 aa11.78□□□□□ -0.52
CNOT4-212ENST00000541284 PDE1AP54750 535 aa11.77□□□□□ -0.52
CNOT4-212ENST00000541284 ZGPATQ8N5A5 531 aaKnown RBP11.77□□□□□ -0.52
CNOT4-212ENST00000541284 IL17RAQ96F46 866 aa11.77□□□□□ -0.52
CNOT4-212ENST00000541284 HOXC9P31274 260 aa11.77□□□□□ -0.53
CNOT4-212ENST00000541284 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
CNOT4-212ENST00000541284 PTMSP20962 102 aa11.76□□□□□ -0.53
CNOT4-212ENST00000541284 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
CNOT4-212ENST00000541284 CPDO75976 1380 aa11.75□□□□□ -0.53
CNOT4-212ENST00000541284 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
CNOT4-212ENST00000541284 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
CNOT4-212ENST00000541284 APBB1O00213 710 aa11.74□□□□□ -0.53
CNOT4-212ENST00000541284 HTATSF1O43719 755 aaKnown RBP11.74□□□□□ -0.53
CNOT4-212ENST00000541284 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
CNOT4-212ENST00000541284 ZNF445P59923 1031 aa11.74□□□□□ -0.53
CNOT4-212ENST00000541284 TSHZ3Q63HK5 1081 aa11.74□□□□□ -0.53
CNOT4-212ENST00000541284 CHAMP1Q96JM3 812 aa11.74□□□□□ -0.53
CNOT4-212ENST00000541284 ERC2O15083 957 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 IL25Q9H293 177 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 PALD1Q9ULE6 856 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
CNOT4-212ENST00000541284 ANKRD36CQ5JPF3 1778 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 ESPNB1AK53 854 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
CNOT4-212ENST00000541284 IL17REQ8NFR9 667 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 STAP2Q9UGK3 403 aa11.73□□□□□ -0.53
CNOT4-212ENST00000541284 DDX60Q8IY21 1712 aaKnown RBP11.73□□□□□ -0.53
CNOT4-212ENST00000541284 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
CNOT4-212ENST00000541284 SOX12O15370 315 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 FLIIQ13045 1269 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 COL14A1Q05707 1796 aaKnown RBP11.72□□□□□ -0.53
CNOT4-212ENST00000541284 EIF5BO60841 1220 aaKnown RBP11.72□□□□□ -0.53
CNOT4-212ENST00000541284 NUCB2P80303 420 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms